source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	40920721	TA	*	INDEL	1bp_deletion	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B105,B31,B51,B94
lof_cds	Chr2	40920726	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	6	B103,B37,B7,C44,C5,C62
lof_cds	Chr2	40920730	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	6	B103,B37,B7,C44,C5,C62
lof_cds	Chr2	40920734	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	30	A5,A8,B103,B104,B111,B112,B29,B44,B58,B65,B72,B8,B99,C1,C10,C14,C21,C25,C28,C33,C41,C44,C45,C5,C64,C69,C8,C80,D10,D2
lof_cds	Chr2	40920747	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	28	A5,A8,B104,B112,B29,B44,B58,B59,B65,B72,B8,B99,C1,C10,C14,C21,C26,C28,C33,C41,C43,C45,C64,C69,C75,C8,C80,D2
lof_cds	Chr2	40920760	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	8	B100,B34,B37,B44,B78,C47,C70,C8
typical_cds_rare	Chr2	40920762	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B123,B36,B51
typical_cds_rare	Chr2	40920773	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	A16,C30
typical_cds_rare	Chr2	40920783	GC	*	INDEL	1bp_deletion	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	C43
lof_cds	Chr2	40920802	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B122,B133,C8
typical_cds_rare	Chr2	40920802	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B122,B133,C8
lof_cds	Chr2	40920808	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B122,B133,C8
typical_cds_rare	Chr2	40920808	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B122,B133,C8
lof_cds	Chr2	40920875	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	38	A5,B1,B104,B124,B128,B24,B26,B27,B30,B35,B39,B4,B40,B44,B62,B64,B67,B72,B85,B94,B97,C1,C11,C25,C31,C37,C48,C52,C69,C72,C73,C74,C78,C80,C83,C85,C87,D3
typical_cds_rare	Chr2	40920882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	B4,B97
typical_cds_rare	Chr2	40920889	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B60,C43,C82
typical_cds_rare	Chr2	40920900	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	A16,C30
lof_cds	Chr2	40920903	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	A21,B46,B7,C53
typical_cds_rare	Chr2	40920903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	A21,B46,B7,C53
lof_cds	Chr2	40920940	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	27	A1,A3,A5,B105,B110,B111,B126,B137,B2,B27,B32,B72,B85,B97,B99,C10,C13,C17,C19,C21,C28,C46,C63,C68,C69,C87,D4
lof_cds	Chr2	40920964	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B101,B110,B56,C2
typical_cds_rare	Chr2	40920964	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B101,B110,B56,C2
lof_cds	Chr2	40920968	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	13	A5,B105,B106,B125,B139,B44,B54,B65,C21,C24,C40,C47,C54
typical_cds_rare	Chr2	40920972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B102,B13,B99,C46
typical_cds_rare	Chr2	40921015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	D3
typical_cds_rare	Chr2	40921017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	C45,C57,C87
typical_cds_rare	Chr2	40921031	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B26,C13,C45,C46
typical_cds_rare	Chr2	40921039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	A16,B1,C30
lof_cds	Chr2	40921045	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	7	B39,B54,B69,C1,C14,C20,C84
typical_cds_rare	Chr2	40921056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B47,B72,C21
typical_cds_rare	Chr2	40921062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	A20,B84,C43,C71
typical_cds_rare	Chr2	40921071	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	C40
typical_cds_rare	Chr2	40921081	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	C40
typical_cds_rare	Chr2	40921088	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	C49
typical_cds_rare	Chr2	40921099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	B10
typical_cds_rare	Chr2	40921107	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	C13,C45
lof_cds	Chr2	40921108	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	19	A10,A15,A24,B103,B106,B114,B118,B122,B3,B37,B60,B72,C21,C27,C37,C49,C51,C56,C9
typical_cds_rare	Chr2	40921249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B104,B95,C14
typical_cds_rare	Chr2	40921254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B22,B24,D1
lof_cds	Chr2	40921256	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	18	A10,A20,A24,B110,B115,B135,B139,B14,B3,B36,B60,C18,C21,C29,C33,C54,C70,C74
lof_cds	Chr2	40921259	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	18	A10,A20,A24,B110,B115,B135,B139,B14,B3,B36,B60,C18,C21,C29,C33,C54,C70,C74
typical_cds_rare	Chr2	40921273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B56,C32,C64,D11
typical_cds_rare	Chr2	40921274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B106,B122,B20,C28
typical_cds_rare	Chr2	40921279	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	B83,D11
lof_cds	Chr2	40921301	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	181	A10,A14,A15,A16,A18,A19,A2,A20,A21,A22,A24,A25,A5,A6,A8,A9,B10,B101,B103,B104,B105,B106,B108,B110,B111,B112,B114,B115,B117,B118,B119,B12,B120,B122,B123,B126,B128,B130,B133,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B19,B20,B21,B22,B23,B26,B27,B28,B3,B30,B31,B33,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B46,B47,B49,B5,B50,B51,B52,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B79,B80,B81,B83,B85,B87,B88,B90,B93,B94,B99,C10,C11,C13,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C27,C29,C3,C32,C33,C34,C35,C36,C37,C39,C41,C42,C45,C46,C47,C48,C49,C51,C54,C56,C58,C6,C60,C61,C62,C64,C65,C67,C68,C69,C7,C70,C72,C74,C75,C76,C77,C78,C8,C80,C81,C82,C84,C86,C9,D1,D10,D11,D3,D6,D7,D8
lof_cds	Chr2	40921309	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	182	A10,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A5,A6,A8,A9,B10,B101,B103,B104,B105,B106,B108,B110,B111,B112,B114,B115,B117,B118,B119,B12,B120,B122,B123,B126,B128,B130,B133,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B19,B20,B21,B22,B23,B26,B27,B28,B3,B30,B31,B33,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B46,B47,B49,B5,B50,B51,B52,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B79,B80,B81,B83,B85,B87,B88,B90,B93,B94,B99,C10,C11,C13,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C27,C29,C3,C32,C33,C34,C35,C36,C37,C39,C41,C42,C45,C46,C47,C48,C49,C51,C54,C56,C58,C6,C60,C61,C62,C64,C65,C67,C68,C69,C7,C70,C72,C74,C75,C76,C77,C78,C8,C80,C81,C82,C84,C86,C9,D1,D10,D11,D3,D6,D7,D8
typical_cds_rare	Chr2	40921315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	B26,B49
typical_cds_rare	Chr2	40921319	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	C11,C33
typical_cds_rare	Chr2	40921327	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B139,B4,B97
typical_cds_rare	Chr2	40921344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	B77
typical_cds_rare	Chr2	40921393	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	B41,B47
typical_cds_rare	Chr2	40921394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	A16,C30
typical_cds_rare	Chr2	40921414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B139,B4,B97,C8
typical_cds_rare	Chr2	40921464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	A7,B13,B52,B61
typical_cds_rare	Chr2	40921472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	A7,B13,B52,B61
typical_cds_rare	Chr2	40921483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	4	B139,B140,B4,B97
typical_cds_rare	Chr2	40921486	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	B41
typical_cds_rare	Chr2	40921488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	A18,C38
typical_cds_rare	Chr2	40921529	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	B41
lof_cds	Chr2	40921531	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	48	A1,A10,A11,A15,A6,B10,B106,B109,B110,B115,B12,B120,B135,B137,B140,B2,B20,B21,B3,B43,B46,B61,B67,B69,B7,B8,B80,B85,B99,C11,C20,C21,C22,C23,C26,C28,C3,C31,C56,C58,C59,C68,C70,C74,C86,C9,D7,D8
lof_cds	Chr2	40921533	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	50	A1,A10,A11,A15,A20,A6,B10,B106,B109,B110,B115,B12,B120,B135,B137,B140,B2,B20,B21,B3,B43,B46,B50,B61,B67,B69,B7,B8,B80,B85,B88,B99,C20,C21,C22,C23,C26,C28,C3,C31,C56,C58,C59,C68,C70,C74,C86,C9,D7,D8
typical_cds_rare	Chr2	40921552	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	2	B105,B41
typical_cds_rare	Chr2	40921570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	5	B28,B5,B87,C10,C79
typical_cds_rare	Chr2	40921581	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	B41
typical_cds_rare	Chr2	40921588	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	3	B105,C34,D10
typical_cds_rare	Chr2	40921611	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	5	A7,B103,B13,B2,B63
typical_cds_rare	Chr2	40921612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	B104
lof_cds	Chr2	40921618	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	D7
typical_cds_rare	Chr2	40921618	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131008462	SmilChr02G002324	131008462	rna-XM_057935338.1	1	D7