source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	42118044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C29
typical_cds_rare	Chr2	42118047	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A19,A22,B137,B18
typical_cds_rare	Chr2	42118050	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B91
typical_cds_rare	Chr2	42118054	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C62
typical_cds_rare	Chr2	42118063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B67,C13
typical_cds_rare	Chr2	42118068	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	C15,D11
lof_cds	Chr2	42118092	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C29
typical_cds_rare	Chr2	42118092	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C29
typical_cds_rare	Chr2	42118103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	5	B20,C72,C78,C79,C87
typical_cds_rare	Chr2	42118105	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C29
typical_cds_rare	Chr2	42118108	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C29
typical_cds_rare	Chr2	42118115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A16,C26,C45,C52
typical_cds_rare	Chr2	42118124	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B91
lof_cds	Chr2	42118157	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	8	B11,B138,B20,B97,C46,C48,C79,D11
typical_cds_rare	Chr2	42118169	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B11,B70
typical_cds_rare	Chr2	42118171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A11,B78,B87
typical_cds_rare	Chr2	42118175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	C45,C52
typical_cds_rare	Chr2	42118188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A6,B50,B94
lof_cds	Chr2	42118190	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	7	A25,A6,B127,B50,B94,C37,C70
lof_cds	Chr2	42118194	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	8	A25,A6,B104,B127,B50,B94,C37,C70
typical_cds_rare	Chr2	42118195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B91
lof_cds	Chr2	42118230	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	10	A25,A6,B104,B127,B14,B50,B94,C16,C57,C70
lof_cds	Chr2	42118238	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	9	A25,A6,B127,B14,B50,B94,C16,C57,C70
typical_cds_rare	Chr2	42118259	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B91
typical_cds_rare	Chr2	42118309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B91
lof_cds	Chr2	42118313	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	91	A1,A11,A13,A14,A16,A18,A2,A24,A3,B102,B103,B105,B108,B109,B110,B112,B114,B117,B118,B124,B13,B131,B134,B135,B136,B138,B139,B25,B37,B39,B4,B40,B45,B49,B51,B54,B58,B64,B65,B68,B69,B7,B70,B71,B78,B80,B83,B86,B87,B88,B90,B91,B92,B96,C1,C15,C19,C2,C20,C22,C23,C28,C32,C34,C35,C36,C43,C45,C47,C5,C52,C53,C56,C57,C59,C61,C64,C68,C69,C71,C74,C76,C78,C82,C83,C84,C85,C86,D1,D11,D2
typical_cds_rare	Chr2	42118330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	5	B29,B31,B58,B91,C31
lof_cds	Chr2	42118352	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C31
typical_cds_rare	Chr2	42118352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C31
typical_cds_rare	Chr2	42118361	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A16,C26,C45,C52
typical_cds_rare	Chr2	42118372	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B31,B91
typical_cds_rare	Chr2	42118386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B30,C9
lof_cds	Chr2	42118394	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	B30,B31,C9
typical_cds_rare	Chr2	42118394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	B30,B31,C9
lof_cds	Chr2	42118395	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	A5,C85
typical_cds_rare	Chr2	42118395	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	A5,C85
typical_cds_rare	Chr2	42118418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A22,A9,B113,B55
lof_cds	Chr2	42118421	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	A5,C85
typical_cds_rare	Chr2	42118421	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	A5,C85
lof_cds	Chr2	42118424	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	A5,C85
typical_cds_rare	Chr2	42118424	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	A5,C85
lof_cds	Chr2	42118440	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A5,B7,C85
typical_cds_rare	Chr2	42118440	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A5,B7,C85
lof_cds	Chr2	42118441	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B119
typical_cds_rare	Chr2	42118441	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B119
typical_cds_rare	Chr2	42118446	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A5,B7,C85
lof_cds	Chr2	42118454	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	9	A22,A8,A9,B112,B128,B20,B55,C39,C41
typical_cds_rare	Chr2	42118464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	B128,B9,C40,C9
typical_cds_rare	Chr2	42118485	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B7,C21
lof_cds	Chr2	42118490	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B62,C63
typical_cds_rare	Chr2	42118490	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B62,C63
lof_cds	Chr2	42118495	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B62,C63
typical_cds_rare	Chr2	42118495	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B62,C63
lof_cds	Chr2	42118498	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C3
typical_cds_rare	Chr2	42118498	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C3
lof_cds	Chr2	42118508	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C39
typical_cds_rare	Chr2	42118508	CCG	C	INDEL	2bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C39
lof_cds	Chr2	42118509	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A5,B7,B82,C85
typical_cds_rare	Chr2	42118509	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A5,B7,B82,C85
lof_cds	Chr2	42118510	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	15	A19,A21,A5,B119,B122,B16,B2,B56,B59,B62,B7,B70,B82,B96,C85
lof_cds	Chr2	42118516	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	11	A19,A21,B119,B122,B16,B2,B59,B62,B70,B96,C39
typical_cds_rare	Chr2	42118521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A5,B7,B82,C85
lof_cds	Chr2	42118523	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A19,B119,B70
typical_cds_rare	Chr2	42118523	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A19,B119,B70
lof_cds	Chr2	42118525	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A19,B119,B70
typical_cds_rare	Chr2	42118525	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A19,B119,B70
typical_cds_rare	Chr2	42118533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B7
typical_cds_rare	Chr2	42118542	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B7,C39
typical_cds_rare	Chr2	42118566	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B7
lof_cds	Chr2	42118575	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B104,B122
typical_cds_rare	Chr2	42118575	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B104,B122
typical_cds_rare	Chr2	42118598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	4	A16,C26,C45,C52
typical_cds_rare	Chr2	42118630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	A11,B78,B87
lof_cds	Chr2	42118663	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	5	B111,B114,B134,B49,D3
typical_cds_rare	Chr2	42118663	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	5	B111,B114,B134,B49,D3
typical_cds_rare	Chr2	42118749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B69
lof_cds	Chr2	42118883	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B46
typical_cds_rare	Chr2	42118883	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B46
lof_cds	Chr2	42118886	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B46
typical_cds_rare	Chr2	42118886	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B46
typical_cds_rare	Chr2	42118898	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	2	B109,B46
typical_cds_rare	Chr2	42118903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B5
typical_cds_rare	Chr2	42118905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	3	B109,B46,B55
typical_cds_rare	Chr2	42118929	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	5	B109,B46,B55,C7,C86
typical_cds_rare	Chr2	42118950	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	5	B46,B55,C25,C7,C86
typical_cds_rare	Chr2	42119008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	C86
typical_cds_rare	Chr2	42119057	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B46
lof_cds	Chr2	42119069	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	10	A8,B113,B132,B137,B31,B41,B55,C46,C72,C79
lof_cds	Chr2	42119071	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	75	A10,A2,A5,A7,A8,B103,B104,B105,B106,B109,B11,B111,B119,B120,B122,B123,B126,B131,B137,B17,B2,B23,B24,B27,B28,B29,B30,B31,B32,B34,B40,B42,B46,B47,B55,B56,B59,B6,B64,B65,B71,B72,B75,B8,B81,B83,B89,B91,B93,B94,B96,B99,C1,C13,C15,C17,C18,C21,C23,C24,C25,C30,C34,C38,C39,C58,C59,C62,C65,C7,C73,C74,C86,C87,C9
lof_cds	Chr2	42119076	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	80	A10,A2,A5,A7,A8,B103,B104,B105,B109,B11,B111,B113,B119,B120,B122,B123,B126,B131,B132,B137,B17,B2,B23,B24,B27,B28,B29,B30,B31,B32,B34,B40,B41,B42,B46,B47,B55,B56,B59,B6,B64,B65,B71,B72,B75,B8,B81,B83,B89,B91,B93,B94,B96,B99,C1,C13,C15,C17,C18,C21,C23,C24,C25,C30,C34,C38,C39,C46,C58,C59,C62,C65,C7,C72,C73,C74,C79,C86,C87,C9
typical_cds_rare	Chr2	42119119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008489	SmilChr02G002415	131008489	rna-XM_057935363.1	1	B29