source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	46342931	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	D10
typical_cds_rare	Chr2	46342954	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	3	C11,C52,C74
typical_cds_rare	Chr2	46342971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	B137
typical_cds_rare	Chr2	46342986	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	C33,C71
typical_cds_rare	Chr2	46342987	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C75
lof_cds	Chr2	46343000	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	76	A19,A20,A9,B100,B105,B110,B111,B114,B117,B119,B12,B122,B127,B130,B134,B136,B137,B138,B19,B22,B25,B26,B27,B30,B37,B44,B46,B49,B56,B60,B61,B63,B68,B74,B79,B81,B84,B85,B87,B88,B9,B90,B92,B93,B98,C11,C2,C21,C24,C26,C31,C32,C33,C34,C51,C52,C54,C57,C61,C64,C65,C66,C68,C69,C7,C71,C73,C75,C78,C8,C86,C87,C9,D5,D7,D8
lof_cds	Chr2	46343002	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	41	A20,A9,B100,B105,B110,B117,B119,B122,B130,B137,B22,B26,B27,B30,B46,B56,B61,B63,B68,B84,B87,B88,B9,B98,C11,C21,C24,C33,C52,C57,C65,C66,C69,C71,C75,C78,C8,C86,C87,D7,D8
lof_cds	Chr2	46343025	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	6	B100,B130,B27,C24,C52,C65
lof_cds	Chr2	46343027	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	6	B100,B130,B27,C24,C52,C65
typical_cds_rare	Chr2	46343032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	B27,B88,C34,C86
lof_cds	Chr2	46343046	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C78
typical_cds_rare	Chr2	46343046	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C78
lof_cds	Chr2	46343048	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C78
typical_cds_rare	Chr2	46343048	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C78
typical_cds_rare	Chr2	46343052	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	B29
typical_cds_rare	Chr2	46343057	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	B62
typical_cds_rare	Chr2	46343059	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	3	B119,B62,C86
typical_cds_rare	Chr2	46343060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	5	B131,B135,B2,B5,C27
typical_cds_rare	Chr2	46343119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	3	B119,B19,B93
typical_cds_rare	Chr2	46343124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	5	B105,B63,B82,C82,C85
typical_cds_rare	Chr2	46343125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	B93
typical_cds_rare	Chr2	46343134	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	3	B129,B69,B91
lof_cds	Chr2	46343151	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	25	A11,A21,A6,B101,B122,B16,B25,B28,B38,B39,B40,B44,B53,B65,B69,B7,B78,B9,B97,C13,C16,C19,C42,C59,C84
lof_cds	Chr2	46343160	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	10	A20,B119,B14,B69,B75,B99,C1,C42,C53,C86
lof_cds	Chr2	46343166	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	D3
typical_cds_rare	Chr2	46343166	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	D3
typical_cds_rare	Chr2	46343179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	B88
typical_cds_rare	Chr2	46343185	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	5	B88,B99,C11,C21,C69
typical_cds_rare	Chr2	46343190	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	B140,B88
typical_cds_rare	Chr2	46343193	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	3	B129,B69,B91
lof_cds	Chr2	46343209	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	A20,B110,B128,B48
typical_cds_rare	Chr2	46343209	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	A20,B110,B128,B48
typical_cds_rare	Chr2	46343227	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	5	B101,B20,B88,B99,C33
typical_cds_rare	Chr2	46343239	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	B47,B88
typical_cds_rare	Chr2	46343244	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	3	B104,C43,D9
typical_cds_rare	Chr2	46343245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	B88
lof_cds	Chr2	46343260	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	103	A1,A18,A19,A20,A22,A5,A6,B10,B101,B104,B11,B110,B111,B114,B115,B119,B12,B122,B126,B128,B134,B136,B137,B138,B14,B18,B19,B20,B22,B27,B3,B35,B37,B38,B46,B47,B48,B5,B53,B57,B58,B60,B62,B66,B67,B68,B72,B73,B75,B79,B8,B82,B84,B85,B86,B88,B90,B91,B92,B93,B98,B99,C1,C11,C16,C20,C21,C24,C26,C31,C32,C33,C38,C4,C41,C42,C43,C44,C51,C53,C54,C57,C60,C61,C62,C63,C64,C66,C67,C68,C69,C7,C70,C73,C75,C77,C79,C83,C86,C9,D1,D2,D5
lof_cds	Chr2	46343261	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	101	A1,A13,A18,A20,A21,A22,A5,A6,B10,B101,B104,B11,B110,B113,B114,B115,B119,B121,B122,B124,B126,B127,B128,B13,B134,B137,B14,B18,B19,B20,B21,B22,B24,B27,B29,B3,B35,B38,B46,B47,B48,B5,B53,B58,B59,B60,B66,B67,B68,B72,B73,B74,B75,B8,B80,B82,B84,B85,B86,B88,B91,B93,B94,B98,B99,C1,C11,C16,C20,C21,C24,C26,C31,C33,C38,C4,C40,C41,C42,C44,C51,C53,C57,C58,C60,C62,C63,C67,C69,C70,C74,C75,C77,C79,C80,C83,C86,D1,D2,D7,D8
typical_cds_rare	Chr2	46343271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	5	B27,B82,B85,C80,C83
lof_cds	Chr2	46343307	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	20	A13,A20,B101,B110,B115,B13,B14,B18,B27,B28,B3,B71,B86,B91,B99,C1,C20,C27,C33,C42
typical_cds_rare	Chr2	46343328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	A21,A23,B105,B131
typical_cds_rare	Chr2	46343331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	A21,A23,B105,B131
typical_cds_rare	Chr2	46343350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	A21,A23,B105,B131
typical_cds_rare	Chr2	46343362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	B17,C17
typical_cds_rare	Chr2	46343380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	D10,D11
typical_cds_rare	Chr2	46343388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C38
typical_cds_rare	Chr2	46343455	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	4	B22,C11,C29,C48
typical_cds_rare	Chr2	46343472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	B117,C47
lof_cds	Chr2	46343483	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	51	A10,A18,A22,B1,B107,B110,B115,B12,B122,B127,B128,B134,B139,B26,B27,B3,B30,B35,B37,B39,B4,B40,B41,B48,B56,B65,B73,B75,B76,B82,B85,B86,B87,B93,B98,C10,C20,C31,C39,C40,C49,C51,C73,C74,C75,C77,C79,C80,C86,D1,D8
lof_cds	Chr2	46343485	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	50	A10,A18,A22,B1,B110,B115,B12,B122,B127,B128,B134,B139,B26,B27,B3,B30,B35,B37,B39,B4,B40,B41,B48,B56,B65,B73,B75,B76,B82,B85,B86,B87,B93,B98,C10,C20,C31,C39,C40,C49,C51,C73,C74,C75,C77,C79,C80,C86,D1,D8
typical_cds_rare	Chr2	46343490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C2
typical_cds_rare	Chr2	46343504	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	2	A21,A23
typical_cds_rare	Chr2	46343558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	C11
typical_cds_rare	Chr2	46343592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009615	SmilChr02G002675	131009615	rna-XM_057937030.1	1	D10