source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	49932173	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	5	B93,C2,C32,C36,C68
typical_cds_rare	Chr2	49932173	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	5	B93,C2,C32,C36,C68
typical_cds_rare	Chr2	49932218	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	4	B130,B99,C25,C5
lof_cds	Chr2	49932434	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	89	A1,A11,A14,A15,A18,A2,A20,A23,A24,A3,A4,A6,A7,B1,B10,B102,B106,B11,B112,B113,B118,B121,B122,B126,B128,B13,B135,B138,B2,B24,B25,B28,B30,B33,B34,B38,B39,B45,B46,B5,B53,B61,B63,B67,B7,B70,B71,B74,B78,B79,B8,B80,B81,B83,B84,B89,B96,B97,B99,C13,C14,C15,C17,C19,C21,C22,C24,C25,C29,C3,C36,C43,C44,C45,C51,C53,C59,C6,C60,C61,C63,C64,C71,C73,C81,C84,C86,D2,D3
typical_cds_rare	Chr2	49932460	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	D11
typical_cds_rare	Chr2	49932470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	B26,B74
lof_cds	Chr2	49932471	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	C22
typical_cds_rare	Chr2	49932471	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	C22
typical_cds_rare	Chr2	49932474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	B101
typical_cds_rare	Chr2	49932479	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	4	B129,B131,B21,D10
typical_cds_rare	Chr2	49932489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	B26,B74
typical_cds_rare	Chr2	49932498	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B132,B62,B90
typical_cds_rare	Chr2	49932503	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	D11
typical_cds_rare	Chr2	49932530	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	B26
typical_cds_rare	Chr2	49932535	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	D11
typical_cds_rare	Chr2	49932543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	4	B109,B111,C68,D11
typical_cds_rare	Chr2	49932551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B109,B111,C68
typical_cds_rare	Chr2	49932557	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	C32,C68
typical_cds_rare	Chr2	49932561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B109,B111,C68
typical_cds_rare	Chr2	49932563	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	B101
lof_cds	Chr2	49932566	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	29	A8,B1,B101,B109,B111,B119,B132,B16,B25,B34,B5,B6,B67,B70,B72,C20,C22,C25,C27,C4,C46,C47,C51,C57,C67,C68,C7,C70,D5
lof_cds	Chr2	49932588	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	B46
typical_cds_rare	Chr2	49932588	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	B46
typical_cds_rare	Chr2	49932600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	B135,C58
lof_cds	Chr2	49932610	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	C80
typical_cds_rare	Chr2	49932610	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	C80
lof_cds	Chr2	49932614	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	13	B105,B119,B123,B134,B33,B60,B79,B85,C38,C39,C7,C9,D11
typical_cds_rare	Chr2	49932616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B124,B27,C25
lof_cds	Chr2	49932727	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	48	A13,A21,A22,A23,A9,B107,B112,B114,B124,B128,B130,B138,B22,B26,B28,B29,B38,B39,B4,B40,B48,B6,B70,B71,B73,B74,B75,B76,B78,B83,B89,B93,B97,B99,C1,C24,C25,C31,C49,C5,C59,C62,C67,C75,C76,C83,D2,D5
lof_cds	Chr2	49932728	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	48	A13,A21,A22,A23,A9,B107,B112,B114,B124,B128,B130,B138,B22,B26,B28,B29,B38,B39,B4,B40,B48,B6,B70,B71,B73,B74,B75,B76,B78,B83,B89,B93,B97,B99,C1,C24,C25,C31,C49,C5,C59,C62,C67,C75,C76,C83,D2,D5
lof_cds	Chr2	49932731	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	24	B111,B112,B12,B133,B138,B23,B26,B44,B5,B53,B61,B73,B74,B76,B95,C13,C18,C24,C27,C54,C56,C6,C70,D11
typical_cds_rare	Chr2	49932735	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	5	B125,C49,C58,C68,C85
typical_cds_rare	Chr2	49932737	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	5	B109,B123,B130,B136,B139
typical_cds_rare	Chr2	49932811	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	B127
typical_cds_rare	Chr2	49932850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	D10
typical_cds_rare	Chr2	49932857	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	5	A21,B69,B89,B93,C49
typical_cds_rare	Chr2	49932862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	4	B115,B2,C19,C21
typical_cds_rare	Chr2	49932871	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	4	B115,B2,C19,C21
lof_cds	Chr2	49932890	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	25	A20,A3,A9,B111,B12,B18,B22,B32,B42,B43,B48,B60,B86,B88,B94,B98,C1,C16,C19,C26,C41,C49,C79,C85,D7
lof_cds	Chr2	49932899	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	B29,B78
typical_cds_rare	Chr2	49932899	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	B29,B78
lof_cds	Chr2	49932902	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	25	A20,A3,A9,B111,B12,B18,B22,B32,B42,B43,B48,B60,B86,B88,B94,B98,C1,C16,C19,C26,C41,C49,C79,C85,D7
lof_cds	Chr2	49932957	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	14	B1,B101,B113,B132,B6,C20,C27,C4,C47,C48,C51,C67,C70,D8
lof_cds	Chr2	49932965	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B94,C49,C85
typical_cds_rare	Chr2	49932965	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B94,C49,C85
typical_cds_rare	Chr2	49932984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	2	B83,C19
lof_cds	Chr2	49932985	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	25	B10,B111,B112,B114,B124,B128,B138,B22,B26,B38,B40,B48,B70,B71,B73,B74,B97,C1,C25,C31,C59,C62,C67,C78,D5
lof_cds	Chr2	49933014	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	116	A10,A11,A14,A19,A2,A22,A24,A6,A7,A8,A9,B10,B101,B104,B106,B108,B11,B110,B113,B115,B12,B120,B121,B124,B125,B126,B127,B137,B14,B15,B16,B17,B18,B19,B21,B22,B23,B25,B27,B28,B29,B35,B36,B37,B40,B44,B47,B5,B50,B52,B53,B55,B6,B62,B65,B66,B67,B68,B69,B7,B72,B73,B75,B76,B77,B80,B81,B86,B87,B9,B90,B92,B93,B99,C1,C10,C11,C12,C16,C20,C23,C25,C28,C32,C35,C37,C4,C40,C42,C43,C44,C45,C46,C50,C52,C54,C55,C57,C62,C65,C67,C68,C69,C70,C72,C75,C8,C83,C84,C85,C9,D1,D6,D7,D8,D9
lof_cds	Chr2	49933015	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	15	A25,B1,B102,B117,B124,B132,B140,B24,B45,B55,C12,C17,C22,C28,C87
typical_cds_rare	Chr2	49933041	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	5	B138,B97,C31,C78,D5
lof_cds	Chr2	49933051	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B97,C31,D5
typical_cds_rare	Chr2	49933051	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	3	B97,C31,D5
typical_cds_rare	Chr2	49933060	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009666	SmilChr02G002943	131009666	rna-XM_057937076.1	1	C49