source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	50112764	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B122
typical_cds_rare	Chr2	50112766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	A3,B119,C31
typical_cds_rare	Chr2	50112787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,C27,D3
typical_cds_rare	Chr2	50112789	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	A14,B78,C43
lof_cds	Chr2	50112814	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	A22,B114
typical_cds_rare	Chr2	50112814	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	A22,B114
lof_cds	Chr2	50112818	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B70
typical_cds_rare	Chr2	50112818	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B70
typical_cds_rare	Chr2	50112824	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B139,B14,C83
lof_cds	Chr2	50112859	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B21,B82,C26,C48
typical_cds_rare	Chr2	50112859	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B21,B82,C26,C48
typical_cds_rare	Chr2	50112879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B75
lof_cds	Chr2	50112894	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	9	A19,B101,B132,B2,B41,B46,B74,C42,D5
typical_cds_rare	Chr2	50112913	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B14
typical_cds_rare	Chr2	50112946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B139,B14,C83
typical_cds_rare	Chr2	50112954	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B131,B46,B53
typical_cds_rare	Chr2	50112958	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B95,B97,C48
typical_cds_rare	Chr2	50112981	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B14
typical_cds_rare	Chr2	50112984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C87
typical_cds_rare	Chr2	50112987	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B113
lof_cds	Chr2	50112994	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	30	A14,A22,B100,B110,B115,B123,B124,B125,B127,B130,B136,B139,B17,B21,B23,B27,B28,B31,B35,B40,B52,B62,B7,C16,C2,C25,C35,C45,C55,D5
typical_cds_rare	Chr2	50113028	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	A21,B48,B98,C61,C80
lof_cds	Chr2	50113065	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B95,B97,C48
typical_cds_rare	Chr2	50113065	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B95,B97,C48
typical_cds_rare	Chr2	50113070	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B139,B14,C83
typical_cds_rare	Chr2	50113085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,B14,C83
typical_cds_rare	Chr2	50113096	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B14,C83
typical_cds_rare	Chr2	50113100	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C53
typical_cds_rare	Chr2	50113103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	A4,B37,B51,B79,C73
typical_cds_rare	Chr2	50113119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B14,C83
typical_cds_rare	Chr2	50113124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	C15,C21
typical_cds_rare	Chr2	50113164	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B139,B14,C83
typical_cds_rare	Chr2	50113202	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B104,B68
typical_cds_rare	Chr2	50113237	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	C15,C21
typical_cds_rare	Chr2	50113254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B4,C27,D3
lof_cds	Chr2	50113269	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	B21,B82,C26,C48,C52
typical_cds_rare	Chr2	50113269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	B21,B82,C26,C48,C52
typical_cds_rare	Chr2	50113318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B137,B76,D7
typical_cds_rare	Chr2	50113337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B13
typical_cds_rare	Chr2	50113343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B95,B97,C48
typical_cds_rare	Chr2	50113376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B30,C15,C21,C76
typical_cds_rare	Chr2	50113382	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,B139,B14
lof_cds	Chr2	50113389	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	12	A24,B1,B102,B34,B73,B75,B81,B87,C2,C35,C37,C74
lof_cds	Chr2	50113390	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	37	A14,A15,A23,A24,B1,B102,B108,B111,B113,B118,B127,B129,B138,B16,B24,B33,B34,B37,B45,B50,B54,B57,B59,B73,B75,B81,B87,B97,B98,C10,C15,C2,C35,C37,C60,C74,C86
lof_cds	Chr2	50113393	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	A21
typical_cds_rare	Chr2	50113393	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	A21
typical_cds_rare	Chr2	50118481	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B46,C1,C24
typical_cds_rare	Chr2	50118482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C42
typical_cds_rare	Chr2	50118492	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	A9,C63,D3
lof_cds	Chr2	50118499	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	10	A19,A4,B104,B106,B52,B56,B85,C12,C19,D7
typical_cds_rare	Chr2	50118502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B137,C46
typical_cds_rare	Chr2	50118505	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	A10,B117,C27,D4
typical_cds_rare	Chr2	50118511	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,B46,D5
lof_cds	Chr2	50118513	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B109
typical_cds_rare	Chr2	50118513	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B109
lof_cds	Chr2	50118526	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B45,B46,D5
typical_cds_rare	Chr2	50118526	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B45,B46,D5
typical_cds_rare	Chr2	50118551	ACG	*	INDEL	2bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	A10,B39,B71,C57
lof_cds	Chr2	50118574	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	12	A14,B113,B121,B87,B94,C3,C61,C64,C78,C81,D1,D2
typical_cds_rare	Chr2	50118597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	A4,B100,C1,C14,C4
typical_cds_rare	Chr2	50118599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B48,C1
lof_cds	Chr2	50118602	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	15	A5,A8,B100,B108,B114,B128,B16,B48,B94,C1,C2,C46,C61,C62,C87
typical_cds_rare	Chr2	50118609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B124,B128,C62
typical_cds_rare	Chr2	50118610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	C32,C68
lof_cds	Chr2	50118612	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	B100,B128,B16,B48,C1
typical_cds_rare	Chr2	50118612	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	5	B100,B128,B16,B48,C1
lof_cds	Chr2	50121403	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B100,B52
typical_cds_rare	Chr2	50121403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B100,B52
typical_cds_rare	Chr2	50121413	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C31
typical_cds_rare	Chr2	50121463	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B4,C27,D3
lof_cds	Chr2	50121469	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	8	B48,B53,B80,B98,C53,C61,C80,C9
typical_cds_rare	Chr2	50121487	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B4,C27
typical_cds_rare	Chr2	50121500	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B139,B14,C83
typical_cds_rare	Chr2	50121516	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B14,C83
typical_cds_rare	Chr2	50121547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	2	B104,C74
typical_cds_rare	Chr2	50121548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B4,C27,D3
typical_cds_rare	Chr2	50121559	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C67
lof_cds	Chr2	50121574	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	35	A10,A15,A22,B101,B104,B11,B112,B122,B128,B133,B15,B19,B55,B56,B57,B58,B65,B72,B74,B88,B96,C14,C19,C29,C34,C47,C48,C51,C58,C74,C76,C77,C82,C87,D1
typical_cds_rare	Chr2	50121590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B68
typical_cds_rare	Chr2	50121609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,B14,C83
typical_cds_rare	Chr2	50121612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B14
typical_cds_rare	Chr2	50121627	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,B14,C83
typical_cds_rare	Chr2	50121661	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B104,B14,C83
typical_cds_rare	Chr2	50121667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C83
typical_cds_rare	Chr2	50121708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C87
typical_cds_rare	Chr2	50121729	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B139,B14,C83
lof_cds	Chr2	50121737	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	13	A24,B1,B102,B34,B7,B73,B75,B81,B87,C2,C35,C37,C74
typical_cds_rare	Chr2	50121742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B52,B61,C81
lof_cds	Chr2	50121744	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C83
typical_cds_rare	Chr2	50121744	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C83
typical_cds_rare	Chr2	50121769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B137,B76,D7
typical_cds_rare	Chr2	50121779	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	C83
lof_cds	Chr2	50121812	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B4,C27,D3
typical_cds_rare	Chr2	50121812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	3	B4,C27,D3
lof_cds	Chr2	50121841	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B104
typical_cds_rare	Chr2	50121841	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B104
typical_cds_rare	Chr2	50121858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	4	B104,B139,B14,C83
typical_cds_rare	Chr2	50121926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009675	SmilChr02G002958	131009675	rna-XM_057937086.1	1	B139