source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	50713777	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	143	A11,A14,A15,A19,A23,A24,A25,A3,A4,A6,A7,A8,A9,B1,B10,B103,B104,B105,B108,B11,B110,B115,B117,B118,B119,B121,B122,B123,B129,B131,B132,B134,B135,B136,B137,B138,B14,B140,B16,B18,B19,B21,B22,B23,B24,B25,B26,B28,B29,B3,B30,B31,B33,B34,B35,B36,B38,B39,B4,B40,B47,B54,B57,B61,B64,B68,B69,B7,B71,B72,B74,B75,B76,B78,B82,B9,B93,B94,B95,B96,B99,C11,C13,C15,C17,C19,C2,C21,C25,C26,C29,C3,C30,C31,C32,C34,C35,C36,C37,C38,C4,C40,C41,C43,C44,C45,C46,C47,C48,C49,C5,C50,C53,C56,C57,C59,C60,C61,C62,C64,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C8,C81,C82,C83,C84,C85,C9,D10,D11,D5,D6,D7,D9
typical_cds_rare	Chr2	50713788	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	B4,B54
typical_cds_rare	Chr2	50713814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B111,B129,C49
typical_cds_rare	Chr2	50713893	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	C62,C67,D8
typical_cds_rare	Chr2	50713901	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C62
lof_cds	Chr2	50713904	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C85
typical_cds_rare	Chr2	50713904	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C85
typical_cds_rare	Chr2	50713932	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	C23,D6
lof_cds	Chr2	50713960	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	A24
typical_cds_rare	Chr2	50713960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	A24
typical_cds_rare	Chr2	50713991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B135,C13,C26
lof_cds	Chr2	50714018	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	39	A21,A22,A23,A24,B100,B101,B103,B109,B11,B115,B119,B138,B14,B16,B45,B47,B48,B55,B59,B64,B81,B87,B88,B98,C18,C27,C28,C31,C40,C45,C46,C50,C52,C53,C60,C7,C80,D2,D6
typical_cds_rare	Chr2	50714056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C13
typical_cds_rare	Chr2	50714063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C13
typical_cds_rare	Chr2	50714069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C13
typical_cds_rare	Chr2	50714093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C13
typical_cds_rare	Chr2	50714119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	B134,B40,C2,C26
typical_cds_rare	Chr2	50714134	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B99
typical_cds_rare	Chr2	50714144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	A24,C3
lof_cds	Chr2	50714203	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B108,B122,B45
typical_cds_rare	Chr2	50714203	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B108,B122,B45
typical_cds_rare	Chr2	50714232	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B44,B84,C35
typical_cds_rare	Chr2	50714256	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	5	B108,B122,B135,C24,C3
typical_cds_rare	Chr2	50714273	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A18,B64,C60,C86
lof_cds	Chr2	50714287	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B84
typical_cds_rare	Chr2	50714287	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B84
typical_cds_rare	Chr2	50714341	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C63
lof_cds	Chr2	50714372	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C8
typical_cds_rare	Chr2	50714372	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C8
typical_cds_rare	Chr2	50714373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	B4,B54
lof_cds	Chr2	50714432	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B121
typical_cds_rare	Chr2	50714432	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B121
typical_cds_rare	Chr2	50714465	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	B8,C14
typical_cds_rare	Chr2	50714477	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	5	B28,B68,C14,C22,C42
typical_cds_rare	Chr2	50714483	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	5	B108,B44,B57,C49,C75
lof_cds	Chr2	50714509	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B54
typical_cds_rare	Chr2	50714509	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B54
typical_cds_rare	Chr2	50714528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A3,B137,B139,C1
typical_cds_rare	Chr2	50714581	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	B64,B91,C28,D4
typical_cds_rare	Chr2	50714584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C82
typical_cds_rare	Chr2	50714587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B99
typical_cds_rare	Chr2	50714601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B139
typical_cds_rare	Chr2	50714646	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	A3,B76,C1
lof_cds	Chr2	50714680	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B111,B29,C34
typical_cds_rare	Chr2	50714680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B111,B29,C34
typical_cds_rare	Chr2	50714686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	C11,C69
typical_cds_rare	Chr2	50714700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	B108,D4
typical_cds_rare	Chr2	50714707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	D3
typical_cds_rare	Chr2	50714708	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	2	B132,C3
typical_cds_rare	Chr2	50714720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B108,B77,D4
typical_cds_rare	Chr2	50714735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	B133,C53,C82,C85
typical_cds_rare	Chr2	50714807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	D3
typical_cds_rare	Chr2	50714828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	D3
typical_cds_rare	Chr2	50714832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A25,B135,B3,C45
lof_cds	Chr2	50714871	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	45	A10,A18,A2,A4,A6,B111,B114,B118,B122,B129,B134,B14,B140,B26,B3,B5,B53,B54,B57,B58,B62,B63,B64,B65,B79,B82,B83,B91,B94,B97,C20,C28,C42,C43,C45,C49,C60,C61,C64,C66,C74,C76,D2,D4,D5
typical_cds_rare	Chr2	50714911	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B90,C23,D3
typical_cds_rare	Chr2	50714926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	C87
typical_cds_rare	Chr2	50714932	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	5	B100,B90,C23,C66,D3
typical_cds_rare	Chr2	50714939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	5	B62,B90,C23,C66,D3
typical_cds_rare	Chr2	50714984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B99
lof_cds	Chr2	50714996	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B100,B57,B92
typical_cds_rare	Chr2	50714996	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B100,B57,B92
lof_cds	Chr2	50714997	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	A16,B17,C12
typical_cds_rare	Chr2	50714997	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	A16,B17,C12
typical_cds_rare	Chr2	50715027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	3	B7,C55,C85
typical_cds_rare	Chr2	50715066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B2
typical_cds_rare	Chr2	50715072	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	5	B140,B2,B50,C1,C29
lof_cds	Chr2	50715084	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	6	A14,B100,B130,B57,B62,B90
typical_cds_rare	Chr2	50715125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	1	B35
lof_cds	Chr2	50715157	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A20,B5,C53,C74
typical_cds_rare	Chr2	50715157	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A20,B5,C53,C74
typical_cds_rare	Chr2	50715173	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A20,B5,C53,C74
typical_cds_rare	Chr2	50715225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009683	SmilChr02G003008	131009683	rna-XM_057937095.1	4	A20,B5,C53,C74