source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	58159885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B40,B93,C2
typical_cds_rare	Chr2	58159886	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B14,B74,C1,C61,C66
typical_cds_rare	Chr2	58159943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B124,B136,B20,B27,C25
lof_cds	Chr2	58159952	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	8	A8,B119,B123,B137,B17,B31,B56,B93
lof_cds	Chr2	58159953	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	22	B104,B11,B131,B22,B26,B32,B35,B5,B71,B76,B89,B90,B92,B94,C15,C19,C25,C30,C53,C70,C81,D6
typical_cds_rare	Chr2	58159960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	B77
typical_cds_rare	Chr2	58159969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	A8,B119,B123,B56,B93
typical_cds_rare	Chr2	58159980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B119,B123
typical_cds_rare	Chr2	58159981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B119,B123,B77
typical_cds_rare	Chr2	58160001	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B119,B123
typical_cds_rare	Chr2	58160008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B119,B123
lof_cds	Chr2	58160021	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B70,C87
typical_cds_rare	Chr2	58160021	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B70,C87
typical_cds_rare	Chr2	58160030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B95,C14,C17
typical_cds_rare	Chr2	58160077	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B22,B60,C41,C50,C55
typical_cds_rare	Chr2	58160080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B124,B136,B20,B27,C25
lof_cds	Chr2	58160085	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	4	B22,B60,C50,C55
typical_cds_rare	Chr2	58160085	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	4	B22,B60,C50,C55
lof_cds	Chr2	58160102	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	A24,A7,B108,B2,C42
typical_cds_rare	Chr2	58160102	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	A24,A7,B108,B2,C42
typical_cds_rare	Chr2	58160107	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B109,B24,B34
typical_cds_rare	Chr2	58160121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	A21,B103
typical_cds_rare	Chr2	58160154	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B107,B140
typical_cds_rare	Chr2	58160159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B107,B140
typical_cds_rare	Chr2	58160168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B107,B140
typical_cds_rare	Chr2	58160177	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	A11
typical_cds_rare	Chr2	58160202	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	B127
typical_cds_rare	Chr2	58160225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	B17
lof_cds	Chr2	58160242	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	18	B108,B112,B114,B14,B140,B37,B41,B50,B67,B81,B9,C23,C40,C54,C56,C65,C76,D8
lof_cds	Chr2	58160261	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B95,C14
typical_cds_rare	Chr2	58160261	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B95,C14
typical_cds_rare	Chr2	58160283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B13,B131
typical_cds_rare	Chr2	58160319	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B107,B140,D7
lof_cds	Chr2	58160320	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	38	A13,A20,A23,A8,B1,B101,B106,B115,B140,B17,B22,B32,B36,B52,B53,B58,B75,B77,B89,B9,B93,C22,C26,C33,C34,C42,C46,C47,C52,C56,C58,C77,C80,C81,C87,C9,D10,D6
typical_cds_rare	Chr2	58160329	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	4	B124,B53,B71,C45
typical_cds_rare	Chr2	58160340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	4	B130,B44,B54,C12
typical_cds_rare	Chr2	58160366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	C87
lof_cds	Chr2	58160375	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	16	A20,B1,B117,B140,B17,B36,B77,B93,C22,C33,C34,C42,C46,C58,C80,C9
lof_cds	Chr2	58160392	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	6	B113,B48,B79,C21,C56,D5
lof_cds	Chr2	58160395	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B113,B48,C21,C56,D5
typical_cds_rare	Chr2	58160395	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B113,B48,C21,C56,D5
lof_cds	Chr2	58160419	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B48,B91,C56
typical_cds_rare	Chr2	58160419	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B48,B91,C56
lof_cds	Chr2	58160421	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B48,C56
typical_cds_rare	Chr2	58160421	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B48,C56
typical_cds_rare	Chr2	58160432	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	A9,D7
typical_cds_rare	Chr2	58160451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	A7
typical_cds_rare	Chr2	58160465	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B109,B24,B34
typical_cds_rare	Chr2	58160470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B131,B41
typical_cds_rare	Chr2	58160499	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B95,C14
typical_cds_rare	Chr2	58160529	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	C36
typical_cds_rare	Chr2	58160541	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	A23,B20,C85
typical_cds_rare	Chr2	58160561	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B131,B132,B9,C60,C67
typical_cds_rare	Chr2	58160574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B46,C52
typical_cds_rare	Chr2	58160584	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B70,C87
typical_cds_rare	Chr2	58160601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	3	B109,B24,B34
typical_cds_rare	Chr2	58160603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	5	B124,B136,B20,B27,C25
typical_cds_rare	Chr2	58160627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	4	B46,B58,C21,C52
typical_cds_rare	Chr2	58161226	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	B104
typical_cds_rare	Chr2	58161252	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	D3
typical_cds_rare	Chr2	58161253	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	1	B104
lof_cds	Chr2	58161261	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	99	A1,A11,A13,A14,A16,A18,A22,A24,A25,A3,A5,A7,B1,B10,B100,B106,B108,B109,B12,B121,B125,B128,B13,B133,B136,B138,B16,B17,B19,B2,B22,B23,B24,B26,B28,B31,B33,B34,B4,B44,B45,B48,B52,B54,B58,B59,B64,B65,B68,B69,B70,B73,B74,B8,B83,B87,B89,B90,B92,B94,B98,C1,C15,C16,C19,C20,C22,C32,C35,C37,C38,C4,C41,C42,C48,C49,C5,C50,C54,C56,C57,C59,C6,C65,C68,C70,C71,C76,C79,C8,C81,C82,D10,D11,D2,D3,D6,D8,D9
typical_cds_rare	Chr2	58161276	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	2	B107,B140
typical_cds_rare	Chr2	58161280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009802	SmilChr02G003679	131009802	rna-XM_057937209.1	4	B131,B132,B9,C67