source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	62879199	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A1,B117,B129,B16,B29
typical_cds_rare	Chr2	62879199	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A1,B117,B129,B16,B29
lof_cds	Chr2	62879200	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A1,B117,B129,B16,B29
typical_cds_rare	Chr2	62879200	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A1,B117,B129,B16,B29
typical_cds_rare	Chr2	62879202	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	3	B19,B85,C56
lof_cds	Chr2	62879203	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	3	B19,B85,C56
typical_cds_rare	Chr2	62879203	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	3	B19,B85,C56
typical_cds_rare	Chr2	62879210	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879215	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879219	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879258	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B29
typical_cds_rare	Chr2	62879352	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A15,B129,B19,B29,B85
lof_cds	Chr2	62879389	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	8	A1,A15,A9,B117,B129,B16,B19,C56
lof_cds	Chr2	62879437	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	8	A1,A15,A9,B117,B129,B16,B19,C56
lof_cds	Chr2	62879440	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	8	A1,A15,A9,B117,B129,B16,B19,C56
lof_cds	Chr2	62879486	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B69
typical_cds_rare	Chr2	62879486	GTC	G	INDEL	2bp_deletion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B69
typical_cds_rare	Chr2	62879547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	D11
lof_cds	Chr2	62879554	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	10	A15,A9,B10,B104,B117,B129,B16,B19,B85,C56
typical_cds_rare	Chr2	62879735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A1,B104,B19,B76,B93
typical_cds_rare	Chr2	62879760	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	3	B104,B19,B76
typical_cds_rare	Chr2	62879824	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B41,C40
typical_cds_rare	Chr2	62879863	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	3	B60,B79,C27
typical_cds_rare	Chr2	62879960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B102
typical_cds_rare	Chr2	62880053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	3	A1,A10,C8
typical_cds_rare	Chr2	62880269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	A2
lof_cds	Chr2	62880323	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	196	A10,A11,A13,A14,A15,A16,A18,A20,A22,A25,A3,A4,A5,A9,B10,B100,B101,B103,B104,B105,B106,B107,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B122,B123,B124,B125,B126,B128,B129,B132,B133,B136,B137,B138,B139,B14,B140,B15,B16,B19,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B36,B37,B38,B39,B41,B42,B43,B44,B45,B46,B48,B49,B5,B51,B52,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B70,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B84,B86,B87,B88,B89,B9,B91,B93,B94,B96,C1,C10,C13,C14,C15,C16,C17,C18,C19,C2,C20,C22,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C41,C42,C43,C45,C46,C48,C49,C5,C50,C51,C52,C54,C55,C56,C58,C59,C6,C61,C62,C63,C64,C65,C66,C67,C68,C70,C71,C72,C74,C75,C76,C79,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D3,D4,D6,D7,D8,D9
lof_cds	Chr2	62880326	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	195	A10,A11,A13,A14,A15,A16,A18,A20,A22,A25,A3,A4,A5,A9,B10,B100,B101,B103,B104,B105,B106,B107,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B122,B123,B124,B125,B126,B128,B129,B132,B133,B136,B137,B138,B139,B14,B15,B16,B19,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B36,B37,B38,B39,B41,B42,B43,B44,B45,B46,B48,B49,B5,B51,B52,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B70,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B84,B86,B87,B88,B89,B9,B91,B93,B94,B96,C1,C10,C13,C14,C15,C16,C17,C18,C19,C2,C20,C22,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C41,C42,C43,C45,C46,C48,C49,C5,C50,C51,C52,C54,C55,C56,C58,C59,C6,C61,C62,C63,C64,C65,C66,C67,C68,C70,C71,C72,C74,C75,C76,C79,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D3,D4,D6,D7,D8,D9
lof_cds	Chr2	62880399	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	C40
typical_cds_rare	Chr2	62880399	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	C40
typical_cds_rare	Chr2	62880701	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	D10,D11
typical_cds_rare	Chr2	62880743	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	B134,B41,B47,C40,C60
typical_cds_rare	Chr2	62881025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B104,C38
lof_cds	Chr2	62881109	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	7	A9,B10,B16,B19,B76,B93,C56
typical_cds_rare	Chr2	62881121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B104
typical_cds_rare	Chr2	62881186	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	A9,B16
typical_cds_rare	Chr2	62881246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B85,B93
typical_cds_rare	Chr2	62881268	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	B129,B16,B29,B93
typical_cds_rare	Chr2	62881271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	B129,B16,B29,B93
typical_cds_rare	Chr2	62881304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	B129,B16,B29,B93
typical_cds_rare	Chr2	62881309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	B134,B41,B47,C40,C60
typical_cds_rare	Chr2	62881310	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	B129,B16,B29,B93
typical_cds_rare	Chr2	62881312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B104
typical_cds_rare	Chr2	62881334	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B16,B93
typical_cds_rare	Chr2	62881337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B16,B93
typical_cds_rare	Chr2	62881393	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B107,B140
typical_cds_rare	Chr2	62881408	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	C47
lof_cds	Chr2	62881415	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B85
typical_cds_rare	Chr2	62881415	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,B117,B16,B85
typical_cds_rare	Chr2	62881435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B16
typical_cds_rare	Chr2	62881438	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B16
lof_cds	Chr2	62881527	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B29
typical_cds_rare	Chr2	62881527	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B29
typical_cds_rare	Chr2	62881551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	A1,A10
typical_cds_rare	Chr2	62881559	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	A2,D11
typical_cds_rare	Chr2	62881561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B29
typical_cds_rare	Chr2	62881571	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B29
typical_cds_rare	Chr2	62881573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B29
typical_cds_rare	Chr2	62881574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B29
typical_cds_rare	Chr2	62881588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	A23
typical_cds_rare	Chr2	62881604	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	A2,D11
typical_cds_rare	Chr2	62881611	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	A2,D11
typical_cds_rare	Chr2	62881612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	C54,C71
typical_cds_rare	Chr2	62881682	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	B117
lof_cds	Chr2	62881737	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,A15,B117,B93
typical_cds_rare	Chr2	62881737	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,A15,B117,B93
typical_cds_rare	Chr2	62881757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,A15,B76,B93
typical_cds_rare	Chr2	62881767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,A15,B76,B93
typical_cds_rare	Chr2	62881785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	4	A1,A15,B76,B93
typical_cds_rare	Chr2	62881801	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	5	A1,A15,B129,B76,B93
typical_cds_rare	Chr2	62881917	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	1	C44
typical_cds_rare	Chr2	62881926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B117,B16
typical_cds_rare	Chr2	62881932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	B117,B16
typical_cds_rare	Chr2	62882123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010987	SmilChr02G004057	131010987	rna-XM_057938714.1	2	A2,D11