source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	65097396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	A15,B103,B127
typical_cds_rare	Chr2	65097451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	1	B40
typical_cds_rare	Chr2	65097458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	B118,B121,B136,C80
typical_cds_rare	Chr2	65097562	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	1	B109
typical_cds_rare	Chr2	65098136	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	2	C82,D10
lof_cds	Chr2	65098147	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	A22,B52,C43,D7
typical_cds_rare	Chr2	65098147	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	A22,B52,C43,D7
typical_cds_rare	Chr2	65098182	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	2	B68,C29
typical_cds_rare	Chr2	65098205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	1	D10
lof_cds	Chr2	65098211	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	147	A1,A15,A16,A19,A2,A20,A23,A24,A25,A3,A4,A6,A7,A8,A9,B1,B10,B102,B103,B104,B105,B107,B108,B109,B11,B114,B118,B12,B121,B122,B123,B124,B125,B126,B128,B129,B132,B134,B135,B136,B137,B138,B15,B17,B19,B2,B20,B22,B24,B25,B26,B27,B29,B3,B31,B33,B35,B36,B37,B38,B39,B40,B44,B45,B50,B51,B53,B54,B57,B58,B6,B61,B65,B68,B70,B71,B72,B73,B75,B76,B78,B79,B8,B81,B83,B86,B9,B91,B92,B94,B98,B99,C1,C13,C15,C18,C19,C20,C22,C23,C24,C25,C27,C29,C3,C31,C32,C33,C34,C35,C38,C40,C43,C44,C45,C46,C47,C48,C50,C52,C53,C55,C56,C57,C59,C62,C63,C67,C68,C69,C7,C70,C71,C74,C77,C78,C82,C84,D1,D10,D11,D2,D3,D4,D5,D6,D9
lof_cds	Chr2	65098216	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	149	A1,A15,A16,A19,A2,A20,A23,A24,A25,A3,A4,A6,A7,A8,A9,B1,B10,B102,B103,B104,B105,B107,B108,B109,B11,B114,B118,B12,B121,B122,B123,B124,B125,B126,B128,B129,B134,B135,B136,B137,B138,B15,B17,B19,B2,B20,B22,B24,B25,B26,B27,B29,B3,B31,B33,B35,B36,B37,B38,B39,B40,B44,B45,B50,B51,B53,B54,B57,B58,B6,B61,B64,B65,B68,B70,B71,B72,B73,B75,B76,B78,B79,B8,B81,B83,B86,B9,B91,B92,B93,B94,B98,B99,C1,C13,C15,C18,C19,C20,C22,C23,C24,C25,C27,C29,C3,C31,C32,C33,C34,C35,C38,C40,C43,C44,C45,C46,C47,C48,C5,C50,C52,C53,C55,C56,C57,C59,C62,C63,C67,C68,C69,C7,C70,C71,C74,C77,C78,C82,C84,D1,D10,D11,D2,D3,D4,D5,D6,D9
typical_cds_rare	Chr2	65098223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	1	B64
lof_cds	Chr2	65098251	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	165	A1,A10,A15,A19,A2,A20,A22,A23,A24,A25,A3,A4,A6,A7,A8,A9,B1,B10,B100,B102,B103,B104,B105,B107,B108,B109,B11,B114,B118,B119,B12,B121,B122,B123,B124,B125,B126,B127,B128,B129,B135,B136,B137,B138,B15,B17,B19,B2,B20,B22,B24,B25,B26,B27,B29,B3,B31,B33,B35,B36,B37,B38,B39,B4,B40,B42,B44,B45,B5,B50,B51,B53,B54,B55,B57,B58,B6,B61,B64,B65,B66,B68,B70,B71,B72,B73,B75,B76,B78,B79,B8,B81,B83,B86,B9,B90,B91,B92,B93,B94,B98,B99,C13,C15,C16,C18,C19,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C31,C32,C33,C34,C35,C38,C40,C42,C43,C44,C45,C46,C47,C48,C49,C50,C52,C53,C54,C55,C56,C57,C59,C62,C63,C67,C68,C69,C70,C71,C72,C74,C77,C78,C8,C80,C82,C84,D1,D10,D11,D2,D3,D4,D5,D6,D9
lof_cds	Chr2	65098319	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	B2,C16,D5
typical_cds_rare	Chr2	65098319	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	B2,C16,D5
lof_cds	Chr2	65098320	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	230	A1,A10,A11,A14,A15,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B114,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B135,B136,B137,B138,B139,B14,B15,B17,B18,B19,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B33,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B48,B5,B50,B51,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C10,C11,C12,C13,C14,C15,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C65,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C82,C84,C85,C87,C9,D1,D10,D11,D2,D3,D4,D6,D8,D9
lof_cds	Chr2	65098321	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	200	A1,A10,A11,A14,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B114,B118,B12,B120,B121,B122,B124,B125,B126,B128,B129,B130,B131,B132,B133,B135,B136,B138,B139,B14,B15,B17,B18,B19,B20,B21,B22,B23,B24,B25,B26,B27,B28,B3,B30,B31,B33,B35,B36,B37,B38,B39,B4,B40,B41,B45,B46,B48,B5,B50,B51,B53,B54,B55,B56,B58,B59,B6,B61,B62,B63,B65,B67,B68,B69,B7,B70,B71,B72,B73,B75,B76,B78,B79,B8,B80,B81,B82,B83,B84,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C11,C12,C15,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C40,C41,C42,C43,C45,C46,C47,C49,C5,C52,C55,C56,C57,C59,C6,C60,C61,C62,C63,C65,C67,C68,C69,C7,C70,C71,C72,C73,C74,C76,C77,C78,C79,C80,C82,C84,C85,C87,C9,D1,D10,D11,D2,D3,D4,D6,D8,D9
lof_cds	Chr2	65098333	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	174	A1,A10,A11,A14,A15,A18,A21,A22,A23,A24,A25,A6,A8,A9,B10,B100,B102,B104,B106,B108,B109,B11,B110,B112,B114,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B131,B132,B135,B136,B137,B138,B14,B15,B16,B17,B18,B19,B20,B21,B22,B23,B24,B27,B28,B29,B3,B30,B33,B35,B37,B38,B39,B40,B41,B42,B44,B45,B47,B48,B5,B53,B54,B55,B57,B58,B59,B6,B60,B61,B62,B63,B64,B66,B67,B68,B69,B73,B75,B76,B77,B78,B83,B84,B85,B86,B88,B89,B9,B90,B91,B93,B96,B97,B98,B99,C10,C11,C12,C13,C14,C16,C19,C2,C21,C22,C23,C24,C25,C26,C28,C3,C30,C31,C33,C36,C37,C38,C39,C4,C41,C42,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C62,C63,C65,C67,C69,C7,C72,C74,C75,C76,C78,C8,C80,C82,C84,C85,D10,D11,D2,D4,D6,D8
lof_cds	Chr2	65098344	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	11	A6,B124,B128,B5,B60,B75,B86,B99,C28,C63,D2
lof_cds	Chr2	65098537	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	B64,C14,D3
typical_cds_rare	Chr2	65098537	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	B64,C14,D3
lof_cds	Chr2	65098552	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	54	A15,B103,B109,B11,B110,B114,B119,B122,B123,B127,B130,B135,B137,B16,B20,B27,B29,B30,B38,B39,B4,B40,B42,B43,B44,B47,B51,B54,B60,B66,B74,B77,B87,B96,C11,C13,C16,C26,C39,C44,C47,C50,C53,C54,C58,C59,C69,C71,C75,C76,C78,C8,C83,C87
typical_cds_rare	Chr2	65098560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	B64,C14,D3
lof_cds	Chr2	65098682	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	5	A9,B12,B129,B87,C20
typical_cds_rare	Chr2	65098682	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	5	A9,B12,B129,B87,C20
typical_cds_rare	Chr2	65098887	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	1	B2
typical_cds_rare	Chr2	65099111	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	1	C82
typical_cds_rare	Chr2	65099204	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	3	B69,C64,C66
lof_cds	Chr2	65099257	T	TAA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	B110,B122,B40,C81
typical_cds_rare	Chr2	65099257	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	B110,B122,B40,C81
typical_cds_rare	Chr2	65099262	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	B110,B122,B40,C81
lof_cds	Chr2	65099268	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	B110,B122,B40,C81
typical_cds_rare	Chr2	65099268	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131012988	SmilChr02G004284	131012988	rna-XM_057940981.1	4	B110,B122,B40,C81