source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	69035778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	D10
lof_cds	Chr2	69036355	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	A5,B101,C68
typical_cds_rare	Chr2	69036355	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	A5,B101,C68
typical_cds_rare	Chr2	69036530	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B72,C36,D7
typical_cds_rare	Chr2	69036541	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B98,C38,C64
typical_cds_rare	Chr2	69036584	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B138,B89,B90
typical_cds_rare	Chr2	69036589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	C61,C79
typical_cds_rare	Chr2	69036595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B122,B64,C87
typical_cds_rare	Chr2	69036630	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A24,B103,B137,B83
typical_cds_rare	Chr2	69036636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A19,B88,C61,C72
typical_cds_rare	Chr2	69036652	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	B138,B89,B90,C35,C82
lof_cds	Chr2	69036661	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B103,B109
typical_cds_rare	Chr2	69036661	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B103,B109
typical_cds_rare	Chr2	69036704	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A24,B140,B60,C52
lof_cds	Chr2	69036726	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	47	A11,A6,B102,B103,B119,B120,B123,B127,B13,B131,B138,B17,B26,B32,B45,B58,B6,B64,B67,B69,B72,B74,B76,B84,B98,C1,C16,C19,C24,C25,C3,C37,C38,C40,C49,C52,C54,C61,C64,C65,C66,C67,C80,C83,C84,D10,D8
lof_cds	Chr2	69036756	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	B103,B137,B34,C24,C70
typical_cds_rare	Chr2	69036756	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	B103,B137,B34,C24,C70
lof_cds	Chr2	69036776	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	11	A13,A19,B120,B36,B88,B97,C59,C61,C74,C79,C85
lof_cds	Chr2	69036794	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	A24,B106
typical_cds_rare	Chr2	69036794	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	A24,B106
typical_cds_rare	Chr2	69036796	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	B107,B127,B42,B65
typical_cds_rare	Chr2	69036814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A14,B27,B61,C73
lof_cds	Chr2	69036826	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A1,B27,B61,C73
typical_cds_rare	Chr2	69036826	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A1,B27,B61,C73
lof_cds	Chr2	69036850	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	80	A10,A11,A13,A2,A22,A24,A3,A7,B102,B111,B115,B124,B131,B135,B140,B20,B24,B29,B3,B30,B31,B33,B36,B41,B46,B47,B48,B5,B50,B51,B53,B56,B6,B60,B61,B7,B71,B72,B77,B78,B79,B8,B80,B86,B89,B9,B93,C10,C11,C14,C18,C19,C2,C21,C22,C26,C29,C30,C31,C33,C34,C36,C41,C42,C44,C45,C48,C51,C6,C61,C63,C65,C67,C69,C74,C87,D3,D5,D7,D9
lof_cds	Chr2	69036877	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	C26
typical_cds_rare	Chr2	69036877	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	C26
typical_cds_rare	Chr2	69036879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	A14
lof_cds	Chr2	69036943	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	A11,B68,C29,C56,D4
typical_cds_rare	Chr2	69036943	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	A11,B68,C29,C56,D4
lof_cds	Chr2	69036945	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	6	A11,B68,C26,C29,C56,D4
typical_cds_rare	Chr2	69036957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B108,C68
typical_cds_rare	Chr2	69036971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	B109,B55,B68,C31
lof_cds	Chr2	69036982	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	21	A3,B128,B139,B23,B24,B61,B66,B71,B72,B75,B83,B86,B88,C2,C34,C38,C45,C47,C63,C68,C8
typical_cds_rare	Chr2	69036983	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	B122,B26,B84,C16,C68
typical_cds_rare	Chr2	69036990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	B84
lof_cds	Chr2	69037018	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	20	A23,B101,B105,B124,B127,B31,B4,B79,B85,B86,B91,C26,C30,C47,C6,C68,C74,C75,C86,C9
lof_cds	Chr2	69037027	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	A11,B28,D4
typical_cds_rare	Chr2	69037027	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	A11,B28,D4
lof_cds	Chr2	69037032	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B101,B124,B4
typical_cds_rare	Chr2	69037032	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B101,B124,B4
typical_cds_rare	Chr2	69037048	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	5	A15,B101,B4,B90,B92
lof_cds	Chr2	69037051	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B101,B124,B4
typical_cds_rare	Chr2	69037051	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B101,B124,B4
lof_cds	Chr2	69037054	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	10	A9,B104,B131,B44,B65,B99,C16,C58,C75,C85
lof_cds	Chr2	69037064	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	17	A18,B140,B15,B66,B70,B72,B86,B87,C22,C33,C38,C45,C63,C68,C79,C87,D3
typical_cds_rare	Chr2	69037076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	A9,C75
lof_cds	Chr2	69037094	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B101,B124,B4
typical_cds_rare	Chr2	69037094	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B101,B124,B4
typical_cds_rare	Chr2	69037102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	B104
typical_cds_rare	Chr2	69037128	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B2,C64
lof_cds	Chr2	69037139	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B5,C18,C74
typical_cds_rare	Chr2	69037139	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B5,C18,C74
lof_cds	Chr2	69037157	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A3,B71,B83,C59
typical_cds_rare	Chr2	69037157	CTG	C	INDEL	2bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	A3,B71,B83,C59
typical_cds_rare	Chr2	69037193	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	3	B136,C60,C84
lof_cds	Chr2	69037215	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	A1
typical_cds_rare	Chr2	69037215	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	A1
lof_cds	Chr2	69037216	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	B72,C11,C24,C45
typical_cds_rare	Chr2	69037216	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	4	B72,C11,C24,C45
lof_cds	Chr2	69037249	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B72,C45
typical_cds_rare	Chr2	69037249	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B72,C45
lof_cds	Chr2	69037257	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	C14
typical_cds_rare	Chr2	69037257	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	C14
lof_cds	Chr2	69037269	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	9	B14,B53,B59,B66,B72,C22,C23,C79,C87
typical_cds_rare	Chr2	69037271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	1	B104
typical_cds_rare	Chr2	69037316	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009927	SmilChr02G004666	131009927	rna-XM_057937326.1	2	B14,B78
