source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	72592540	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	27	A13,A5,B103,B114,B126,B127,B128,B14,B29,B31,B32,B37,B66,C14,C26,C39,C4,C41,C46,C48,C54,C60,C71,C74,C86,D10,D5
typical_cds_rare	Chr2	72592543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C48
typical_cds_rare	Chr2	72592546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B99
lof_cds	Chr2	72592550	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B128
typical_cds_rare	Chr2	72592550	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B128
lof_cds	Chr2	72592551	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	6	B117,B122,B137,B66,B98,C38
typical_cds_rare	Chr2	72593077	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	D7
typical_cds_rare	Chr2	72593132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	5	A14,B49,B72,C16,C46
typical_cds_rare	Chr2	72593141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B136
typical_cds_rare	Chr2	72593144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B105,B9
lof_cds	Chr2	72593177	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	30	A14,A25,A3,A5,A8,B102,B124,B128,B129,B135,B18,B21,B39,B43,B51,B52,B8,B86,B94,C14,C27,C35,C52,C54,C63,C69,C7,C77,C80,D6
lof_cds	Chr2	72593238	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	64	A10,A11,A14,A16,A20,A23,A24,A9,B105,B107,B114,B119,B12,B120,B122,B123,B124,B131,B133,B19,B2,B20,B22,B25,B29,B32,B33,B35,B38,B39,B4,B44,B49,B50,B54,B65,B7,B71,B73,B81,B85,B86,B97,B99,C11,C15,C19,C25,C30,C35,C36,C43,C52,C57,C6,C62,C64,C67,C70,C78,C8,C85,D4,D5
typical_cds_rare	Chr2	72593251	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	B1,B2,B63
typical_cds_rare	Chr2	72593253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C81
typical_cds_rare	Chr2	72593271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B104,C84
typical_cds_rare	Chr2	72593276	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C81
typical_cds_rare	Chr2	72593356	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	A24,B78,C58
typical_cds_rare	Chr2	72593366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B104,C84
lof_cds	Chr2	72593379	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	B106,B31,B39,B85
typical_cds_rare	Chr2	72593379	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	B106,B31,B39,B85
typical_cds_rare	Chr2	72593396	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	B2,B63,C35
lof_cds	Chr2	72593400	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B113,C1
typical_cds_rare	Chr2	72593400	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B113,C1
typical_cds_rare	Chr2	72593418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	B2,B63,B69
typical_cds_rare	Chr2	72593455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	D10
lof_cds	Chr2	72593478	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	26	A11,A7,B110,B112,B125,B135,B138,B14,B23,B26,B30,B4,B5,B57,B62,B70,B72,B76,B98,C10,C34,C54,C61,C65,C66,C79
lof_cds	Chr2	72593481	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	27	A11,A7,B110,B112,B125,B130,B135,B138,B14,B23,B26,B30,B4,B5,B57,B62,B70,B72,B76,B98,C10,C34,C54,C61,C65,C66,C79
lof_cds	Chr2	72593490	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	30	A11,A7,B112,B113,B119,B125,B130,B135,B138,B14,B23,B26,B30,B4,B48,B5,B57,B62,B70,B76,B94,B98,C10,C34,C44,C54,C61,C65,C66,C79
lof_cds	Chr2	72593493	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	30	A11,A7,A9,B112,B113,B119,B125,B130,B135,B138,B14,B23,B26,B30,B4,B48,B5,B57,B62,B70,B76,B94,B98,C10,C34,C44,C54,C61,C65,C79
typical_cds_rare	Chr2	72593508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	B37,C40,C87
typical_cds_rare	Chr2	72593539	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	D11
typical_cds_rare	Chr2	72593558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C38
typical_cds_rare	Chr2	72593576	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	A9
lof_cds	Chr2	72593604	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B127,C44
typical_cds_rare	Chr2	72593604	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B127,C44
typical_cds_rare	Chr2	72593633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B104,B26
lof_cds	Chr2	72593667	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	81	A1,A11,A14,A15,A2,A6,A7,A9,B10,B100,B103,B105,B107,B110,B112,B113,B115,B119,B122,B125,B13,B130,B131,B134,B135,B138,B140,B17,B23,B24,B26,B29,B30,B33,B4,B40,B46,B5,B57,B62,B65,B66,B70,B87,B89,B90,B92,B94,B98,B99,C10,C11,C20,C21,C23,C26,C3,C31,C33,C34,C44,C48,C5,C53,C54,C57,C58,C60,C61,C62,C63,C64,C65,C66,C70,C73,C79,C9,D11,D2,D7
lof_cds	Chr2	72593668	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	78	A1,A14,A2,A6,A7,A9,B10,B100,B103,B105,B107,B110,B112,B113,B115,B119,B122,B125,B13,B130,B131,B134,B135,B138,B140,B17,B23,B24,B26,B29,B30,B33,B4,B40,B46,B5,B57,B62,B65,B66,B70,B87,B89,B90,B92,B94,B98,B99,C10,C11,C20,C21,C23,C26,C3,C31,C33,C34,C44,C48,C5,C53,C54,C57,C58,C60,C61,C62,C64,C65,C66,C70,C73,C79,C9,D11,D2,D7
typical_cds_rare	Chr2	72593691	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	A11,C24,C55,C64
typical_cds_rare	Chr2	72593727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B136,C50
typical_cds_rare	Chr2	72593732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	A9,D7
typical_cds_rare	Chr2	72593751	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	B76,C28,C47
typical_cds_rare	Chr2	72593753	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	A5,B127,B48
typical_cds_rare	Chr2	72593822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	B2,C10,C67,D5
lof_cds	Chr2	72593842	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B30,B76
typical_cds_rare	Chr2	72593842	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B30,B76
lof_cds	Chr2	72593844	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	26	A1,A11,A15,A2,A3,A5,A9,B119,B127,B129,B17,B18,B23,B24,B33,B62,B89,B98,C33,C48,C49,C57,C64,C79,C85,D2
lof_cds	Chr2	72593893	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C74
typical_cds_rare	Chr2	72593893	C	CGG	INDEL	2bp_insertion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C74
typical_cds_rare	Chr2	72593926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	A9,C57
typical_cds_rare	Chr2	72593956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	A6,B128,C63
typical_cds_rare	Chr2	72593995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	5	B28,B46,B75,C73,C86
typical_cds_rare	Chr2	72594002	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	A5,B94
typical_cds_rare	Chr2	72594005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	C28,C74
typical_cds_rare	Chr2	72594047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	A16,B38,B73
lof_cds	Chr2	72594120	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	16	A5,A7,A9,B101,B113,B119,B135,B14,B29,B46,B58,B65,C11,C22,C29,C69
typical_cds_rare	Chr2	72594154	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	A9,B101,B42,C56
typical_cds_rare	Chr2	72594215	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B73
typical_cds_rare	Chr2	72594217	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	5	A16,A23,B87,C36,C71
typical_cds_rare	Chr2	72594233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	B74,C64,C70,D11
lof_cds	Chr2	72594298	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	86	A1,A11,A13,A2,A24,A25,A5,A7,B1,B10,B101,B103,B108,B11,B110,B113,B115,B117,B12,B122,B125,B127,B128,B130,B134,B136,B14,B140,B17,B18,B23,B27,B28,B37,B4,B40,B45,B46,B48,B57,B60,B64,B65,B66,B70,B71,B74,B85,B88,B90,B92,B93,B94,B95,B98,C1,C10,C11,C14,C18,C22,C23,C29,C4,C42,C44,C45,C48,C5,C50,C53,C54,C57,C58,C62,C64,C69,C70,C73,C79,C80,C85,D10,D2,D3,D8
lof_cds	Chr2	72594300	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	75	A1,A11,A13,A24,A25,A5,A7,B1,B10,B101,B103,B108,B11,B110,B113,B115,B117,B12,B122,B127,B128,B130,B134,B136,B17,B18,B23,B27,B28,B4,B40,B45,B46,B48,B57,B60,B64,B65,B66,B70,B71,B74,B85,B88,B93,B94,B98,C1,C10,C11,C14,C22,C23,C29,C4,C42,C44,C48,C5,C50,C53,C54,C57,C58,C62,C64,C69,C70,C73,C79,C80,C85,D10,D2,D8
typical_cds_rare	Chr2	72594302	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	B138,B26,C47,C72
lof_cds	Chr2	72594332	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	12	A25,B10,B115,B17,B37,B45,B85,B88,B94,C1,C79,D11
lof_cds	Chr2	72594335	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	66	A11,A19,A2,A7,B103,B109,B11,B110,B111,B115,B12,B125,B13,B130,B14,B140,B17,B18,B23,B28,B35,B4,B40,B45,B46,B57,B59,B60,B64,B65,B66,B69,B70,B72,B73,B82,B90,B92,B93,B94,B95,B98,C10,C11,C12,C19,C22,C24,C29,C3,C36,C42,C5,C50,C54,C58,C64,C69,C70,C72,C73,C80,C83,D10,D2,D3
typical_cds_rare	Chr2	72594360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	B114,B51,B97,C67
lof_cds	Chr2	72594361	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	6	B118,B13,C1,C32,C68,C83
lof_cds	Chr2	72594365	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	6	B118,B13,C1,C32,C68,C83
typical_cds_rare	Chr2	72594389	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B61
typical_cds_rare	Chr2	72594431	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B67,C23
lof_cds	Chr2	72594494	A	AC	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B140,B35
typical_cds_rare	Chr2	72594494	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	B140,B35
lof_cds	Chr2	72594496	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B140
typical_cds_rare	Chr2	72594496	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B140
lof_cds	Chr2	72594498	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B140
typical_cds_rare	Chr2	72594498	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B140
typical_cds_rare	Chr2	72594499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	A13,B104,C84
typical_cds_rare	Chr2	72594502	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	2	C54,C74
typical_cds_rare	Chr2	72594562	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	4	A5,B135,B94,D11
typical_cds_rare	Chr2	72594577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	C29,C40,C8
typical_cds_rare	Chr2	72594677	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	3	B28,C33,C74
lof_cds	Chr2	72594685	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B61
typical_cds_rare	Chr2	72594685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	B61
typical_cds_rare	Chr2	72594735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009104	SmilChr02G005108	131009104	rna-XM_057936318.1	1	C47