source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	74482208	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	33	A1,A24,A25,A4,B124,B129,B136,B15,B26,B35,B44,B45,B50,B7,B74,B78,B8,B89,B96,C10,C13,C16,C17,C23,C24,C30,C34,C42,C43,C60,C70,D3,D7
lof_cds	Chr2	74482212	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	33	A1,A24,A25,A4,B124,B129,B136,B15,B26,B35,B44,B45,B50,B7,B74,B78,B8,B89,B96,C10,C13,C16,C17,C23,C24,C30,C34,C42,C43,C60,C70,D3,D7
lof_cds	Chr2	74482213	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	9	B1,B27,B46,B54,B70,C39,C62,C72,C73
typical_cds_rare	Chr2	74482240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B33,C80
lof_cds	Chr2	74482293	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	6	A5,B108,B78,C39,C72,C73
lof_cds	Chr2	74482348	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	14	A5,B1,B108,B27,B36,B46,B54,B70,B78,C39,C62,C72,C73,C78
lof_cds	Chr2	74482395	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	C25
typical_cds_rare	Chr2	74482395	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	C25
lof_cds	Chr2	74482409	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	58	A13,A14,A2,B103,B104,B113,B118,B119,B121,B127,B128,B131,B20,B37,B38,B39,B41,B49,B53,B59,B60,B62,B68,B70,B75,B77,B79,B87,B94,B99,C10,C19,C2,C20,C25,C28,C32,C35,C38,C39,C46,C5,C51,C52,C57,C58,C60,C61,C65,C67,C68,C72,C73,C78,C79,C86,D10,D7
lof_cds	Chr2	74482411	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	58	A13,A14,A15,A2,B103,B104,B113,B118,B119,B121,B127,B128,B131,B20,B37,B38,B39,B41,B49,B53,B59,B60,B62,B68,B70,B75,B77,B79,B87,B94,B99,C10,C19,C2,C20,C25,C28,C32,C35,C38,C39,C46,C5,C51,C52,C57,C58,C60,C61,C65,C67,C68,C72,C73,C79,C86,D10,D7
lof_cds	Chr2	74482415	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	A15
typical_cds_rare	Chr2	74482415	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	A15
typical_cds_rare	Chr2	74482478	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	B101
lof_cds	Chr2	74482508	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	C63
typical_cds_rare	Chr2	74482508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	C63
lof_cds	Chr2	74482594	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	3	B70,B77,C39
typical_cds_rare	Chr2	74482594	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	3	B70,B77,C39
lof_cds	Chr2	74482629	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	39	A13,A22,B103,B104,B111,B140,B22,B31,B34,B35,B41,B6,B71,B72,B77,B80,B86,B87,B91,B95,C15,C2,C20,C24,C25,C3,C31,C38,C5,C57,C59,C61,C73,C74,C78,C82,C9,D10,D4
typical_cds_rare	Chr2	74482663	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	4	B108,B78,C72,C78
typical_cds_rare	Chr2	74482690	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	4	B120,B139,C47,C7
typical_cds_rare	Chr2	74482692	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	5	B108,B78,C31,C72,C78
typical_cds_rare	Chr2	74482701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	C38,C79
typical_cds_rare	Chr2	74482736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	C34,D6
typical_cds_rare	Chr2	74482752	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B46,B76
lof_cds	Chr2	74482767	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	25	A20,A22,B104,B108,B31,B35,B5,B53,B55,B77,B78,B80,B81,B86,B91,C2,C25,C46,C48,C69,C71,C74,C83,D4,D6
typical_cds_rare	Chr2	74483911	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	4	B127,B76,C20,C5
typical_cds_rare	Chr2	74483966	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	B128
typical_cds_rare	Chr2	74483973	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	5	B102,B70,C32,C39,C68
typical_cds_rare	Chr2	74484007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	C34,D6
typical_cds_rare	Chr2	74484014	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	B128
typical_cds_rare	Chr2	74484018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	5	B59,B6,C63,C72,C8
typical_cds_rare	Chr2	74484046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B27,B36
typical_cds_rare	Chr2	74484065	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	B128
typical_cds_rare	Chr2	74484139	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	C73
typical_cds_rare	Chr2	74484149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	5	B46,B70,C28,C45,C62
typical_cds_rare	Chr2	74484150	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	3	B13,B14,B16
typical_cds_rare	Chr2	74484153	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	3	B109,B128,B20
typical_cds_rare	Chr2	74484176	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B128,B20
lof_cds	Chr2	74484213	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	41	A1,A10,A24,A25,B106,B108,B109,B11,B112,B124,B129,B130,B134,B136,B139,B19,B29,B32,B35,B38,B39,B44,B45,B56,B74,B8,B89,B90,B92,B97,C10,C13,C16,C23,C30,C43,C56,C68,C9,D1,D3
typical_cds_rare	Chr2	74484225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B128,B20
typical_cds_rare	Chr2	74484233	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B128,B20
lof_cds	Chr2	74484239	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B128,B20
typical_cds_rare	Chr2	74484239	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B128,B20
typical_cds_rare	Chr2	74484307	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	5	B127,B41,C20,C39,C46
typical_cds_rare	Chr2	74484315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	3	B106,B128,B20
typical_cds_rare	Chr2	74484317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	4	B23,B49,B95,C78
lof_cds	Chr2	74484374	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	56	A1,A11,A15,B106,B108,B109,B11,B121,B122,B124,B129,B136,B139,B15,B17,B18,B26,B29,B32,B38,B39,B44,B47,B50,B56,B57,B62,B63,B64,B68,B7,B74,B78,B8,B83,B84,B87,B89,B90,B92,B97,C13,C16,C22,C23,C24,C27,C30,C34,C43,C60,C68,C70,D1,D2,D7
lof_cds	Chr2	74484406	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	35	A2,B102,B119,B127,B16,B38,B39,B49,B53,B62,B69,B70,B75,B77,B78,B94,B99,C19,C2,C25,C30,C32,C39,C51,C52,C58,C60,C61,C65,C68,C73,C78,D10,D7,D9
lof_cds	Chr2	74484411	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	29	A2,B119,B127,B16,B38,B39,B49,B53,B62,B69,B70,B75,B78,B94,B99,C19,C25,C30,C39,C51,C52,C58,C60,C61,C65,C73,C78,D7,D9
lof_cds	Chr2	74484412	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	29	A2,B119,B127,B16,B38,B39,B49,B53,B62,B69,B70,B75,B78,B94,B99,C19,C25,C30,C39,C51,C52,C58,C60,C61,C65,C73,C78,D7,D9
typical_cds_rare	Chr2	74485344	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	2	B1,B54
lof_cds	Chr2	74485422	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	18	A14,A25,B104,B110,B113,B123,B132,B140,B67,B72,B75,C16,C27,C31,C51,C54,C63,D10
lof_cds	Chr2	74485525	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	71	A16,A18,A21,A4,A6,A9,B1,B10,B100,B102,B103,B105,B107,B109,B111,B114,B120,B122,B127,B131,B137,B16,B20,B24,B26,B27,B30,B37,B4,B44,B50,B51,B52,B56,B65,B66,B7,B70,B71,B77,B78,B80,B81,B90,B92,B93,B96,B98,C1,C12,C2,C25,C30,C32,C37,C39,C47,C48,C5,C54,C55,C60,C62,C74,C76,C85,C87,D10,D2,D7,D8
lof_cds	Chr2	74485526	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	71	A16,A18,A21,A4,A6,A9,B1,B10,B100,B102,B103,B105,B107,B109,B111,B114,B120,B122,B127,B131,B137,B16,B20,B24,B26,B27,B30,B37,B4,B44,B50,B51,B52,B56,B65,B66,B7,B70,B71,B77,B78,B80,B81,B90,B92,B93,B96,B98,C1,C12,C2,C25,C30,C32,C37,C39,C47,C48,C5,C54,C55,C60,C62,C74,C76,C85,C87,D10,D2,D7,D8
typical_cds_rare	Chr2	74485536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	3	B41,B69,C70
lof_cds	Chr2	74485544	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	D11
typical_cds_rare	Chr2	74485544	GTA	G	INDEL	2bp_deletion	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	D11
typical_cds_rare	Chr2	74485559	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	1	D11
lof_cds	Chr2	74485905	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	38	A1,A2,A20,B101,B119,B139,B22,B27,B29,B30,B34,B36,B38,B39,B62,B72,B75,B86,B9,B94,B98,B99,C11,C12,C19,C25,C31,C47,C48,C51,C52,C58,C59,C61,C65,C69,C7,C71
typical_cds_rare	Chr2	74485948	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009993	SmilChr02G005381	131009993	rna-XM_057937388.1	5	A4,B122,B90,C32,C85