source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	74595874	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	6	B105,B31,B54,C1,D11,D8
typical_cds_rare	Chr2	74595909	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B2,C14
typical_cds_rare	Chr2	74595910	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	3	B105,C1,D8
typical_cds_rare	Chr2	74595933	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B2,C14
typical_cds_rare	Chr2	74595992	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	C2
typical_cds_rare	Chr2	74596011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B3
typical_cds_rare	Chr2	74596015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	4	B131,B139,C46,C49
lof_cds	Chr2	74596031	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	71	A18,A2,A23,A3,A4,A5,A9,B101,B103,B104,B111,B113,B119,B12,B122,B129,B131,B135,B136,B139,B18,B2,B21,B23,B27,B30,B34,B35,B38,B40,B41,B44,B46,B57,B62,B64,B68,B70,B71,B72,B75,B78,B85,B89,B91,B99,C15,C19,C25,C35,C36,C37,C46,C47,C48,C49,C50,C51,C52,C54,C59,C61,C62,C65,C67,C72,C74,C77,C83,C84,D2
lof_cds	Chr2	74596036	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	67	A18,A2,A23,A3,A4,A5,A9,B101,B103,B104,B111,B113,B119,B12,B122,B129,B131,B135,B136,B139,B18,B2,B21,B23,B27,B30,B34,B35,B38,B40,B44,B46,B57,B62,B64,B68,B71,B75,B78,B85,B89,B91,B99,C15,C19,C25,C35,C36,C37,C46,C47,C48,C50,C51,C52,C54,C59,C61,C62,C65,C67,C72,C74,C77,C83,C84,D2
lof_cds	Chr2	74596053	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B139,C46
typical_cds_rare	Chr2	74596053	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B139,C46
typical_cds_rare	Chr2	74596073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B109
lof_cds	Chr2	74596082	T	TC	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	59	A18,A2,A20,A23,A3,A4,A5,A9,B101,B103,B104,B105,B113,B119,B12,B122,B126,B136,B18,B21,B23,B30,B34,B35,B40,B41,B44,B46,B64,B70,B71,B72,B75,B77,B78,B8,B89,B90,B91,B99,C19,C25,C35,C36,C37,C46,C48,C5,C51,C52,C54,C59,C61,C62,C65,C74,C77,C84,D2
lof_cds	Chr2	74596084	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	56	A18,A2,A20,A23,A3,A4,A5,A9,B101,B104,B105,B113,B119,B12,B122,B126,B136,B18,B21,B23,B30,B34,B35,B40,B41,B44,B46,B64,B71,B72,B75,B77,B78,B8,B89,B90,B91,B99,C19,C25,C35,C36,C37,C46,C48,C5,C51,C52,C54,C59,C62,C65,C74,C77,C84,D2
lof_cds	Chr2	74596091	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	56	A18,A2,A20,A23,A3,A4,A5,A9,B105,B113,B119,B12,B122,B126,B136,B18,B2,B21,B30,B34,B40,B41,B44,B46,B64,B70,B71,B72,B75,B77,B78,B8,B89,B90,B91,B99,C19,C25,C35,C36,C37,C46,C48,C5,C51,C52,C54,C59,C61,C62,C65,C74,C75,C77,C84,D2
typical_cds_rare	Chr2	74596102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B118
typical_cds_rare	Chr2	74596104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	3	A2,B44,C35
lof_cds	Chr2	74596105	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	8	B103,B109,B87,C15,C17,C35,C61,C7
lof_cds	Chr2	74596107	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	8	B103,B109,B87,C15,C17,C35,C61,C7
lof_cds	Chr2	74596108	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	56	A10,A13,A18,B105,B106,B11,B118,B131,B134,B136,B15,B19,B2,B24,B25,B27,B32,B37,B38,B39,B45,B46,B59,B6,B74,B76,B8,B83,B93,B97,B98,B99,C11,C14,C18,C24,C3,C38,C4,C45,C47,C56,C58,C60,C63,C69,C74,C76,C79,C8,C81,C86,C87,D4,D7,D9
lof_cds	Chr2	74596128	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	34	A18,A3,A5,A9,B105,B113,B119,B12,B122,B136,B21,B30,B34,B41,B46,B64,B70,B71,B72,B75,B78,B91,B99,C19,C36,C48,C51,C59,C61,C62,C74,C77,C84,D2
lof_cds	Chr2	74596130	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	34	A18,A3,A5,A9,B105,B113,B119,B12,B122,B136,B21,B30,B34,B41,B46,B64,B70,B71,B72,B75,B78,B91,B99,C19,C36,C48,C51,C59,C61,C62,C74,C77,C84,D2
lof_cds	Chr2	74596163	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B136,B46
typical_cds_rare	Chr2	74596163	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B136,B46
lof_cds	Chr2	74596168	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B136,B46
typical_cds_rare	Chr2	74596168	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B136,B46
typical_cds_rare	Chr2	74596176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	3	B136,C15,C7
lof_cds	Chr2	74596231	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B61
typical_cds_rare	Chr2	74596231	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B61
typical_cds_rare	Chr2	74596284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B41,C19
lof_cds	Chr2	74596290	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	5	B111,B128,B20,C37,C67
typical_cds_rare	Chr2	74596290	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	5	B111,B128,B20,C37,C67
typical_cds_rare	Chr2	74596344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B24,C14
lof_cds	Chr2	74596345	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B72
typical_cds_rare	Chr2	74596345	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B72
lof_cds	Chr2	74596347	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B72
typical_cds_rare	Chr2	74596347	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B72
lof_cds	Chr2	74596372	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	8	A1,B34,C11,C15,C30,C31,C69,C7
typical_cds_rare	Chr2	74596405	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	3	B118,B25,B29
typical_cds_rare	Chr2	74596414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	4	B104,B55,B93,C23
lof_cds	Chr2	74596424	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	5	A21,B53,B72,B77,C62
typical_cds_rare	Chr2	74596424	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	5	A21,B53,B72,B77,C62
typical_cds_rare	Chr2	74596448	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B70
typical_cds_rare	Chr2	74596495	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B23,B86
typical_cds_rare	Chr2	74596513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B3,D10
lof_cds	Chr2	74596682	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	11	B105,B3,B59,B61,C1,C15,C27,C82,D6,D8,D9
lof_cds	Chr2	74596686	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	11	B105,B3,B59,B61,C1,C15,C27,C82,D6,D8,D9
typical_cds_rare	Chr2	74596726	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	4	A6,B40,B41,C47
typical_cds_rare	Chr2	74596816	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B24,C14
lof_cds	Chr2	74596831	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	28	A15,B10,B112,B123,B130,B139,B14,B4,B42,B48,B52,B55,B58,B90,C18,C23,C28,C29,C32,C40,C53,C55,C63,C68,C78,C79,D5,D7
lof_cds	Chr2	74596851	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	58	A2,A20,A22,A3,A4,A5,A9,B1,B105,B111,B113,B119,B12,B122,B135,B136,B18,B21,B23,B26,B28,B34,B38,B39,B46,B5,B62,B64,B68,B71,B72,B73,B75,B78,B82,B85,B89,B91,B99,C1,C19,C25,C36,C5,C50,C51,C54,C59,C61,C65,C67,C74,C75,C77,C80,C83,C84,C85
lof_cds	Chr2	74596860	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	40	A13,A9,B101,B103,B105,B106,B11,B111,B118,B131,B2,B20,B24,B27,B3,B30,B38,B45,B55,B61,B66,B68,B80,B82,B94,B97,C1,C16,C22,C27,C33,C35,C53,C6,C61,C69,C74,C82,C87,D9
lof_cds	Chr2	74596864	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	7	B3,B61,B82,C1,C27,C82,D9
typical_cds_rare	Chr2	74596878	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	4	A7,B118,B40,C47
typical_cds_rare	Chr2	74596886	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	B24
typical_cds_rare	Chr2	74596903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B104,B93
typical_cds_rare	Chr2	74596925	GCC	*	INDEL	2bp_deletion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B104,B93
typical_cds_rare	Chr2	74597006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	4	B109,B98,C17,C35
typical_cds_rare	Chr2	74597031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B2,C18
typical_cds_rare	Chr2	74597054	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	5	B125,B3,B72,C62,D10
lof_cds	Chr2	74597119	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	C87
typical_cds_rare	Chr2	74597119	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	1	C87
typical_cds_rare	Chr2	74597148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	C62,D10
typical_cds_rare	Chr2	74597171	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	3	B59,B6,B98
lof_cds	Chr2	74597177	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B46,C20
typical_cds_rare	Chr2	74597177	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131010009	SmilChr02G005409	131010009	rna-XM_057937404.1	2	B46,C20