source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	75289448	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	10	B113,B24,B27,B8,B83,B86,C13,C36,C4,C76
typical_cds_rare	Chr2	75289482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B16,B50,C14,C42,C70
typical_cds_rare	Chr2	75289502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	4	B140,C45,C58,C87
lof_cds	Chr2	75289518	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	11	A16,B113,B13,B138,B70,B80,B90,B98,C62,C74,C78
lof_cds	Chr2	75289521	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	11	A16,B113,B13,B138,B70,B80,B90,B98,C62,C74,C78
typical_cds_rare	Chr2	75289648	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B50,B83,B86,C13,C76
typical_cds_rare	Chr2	75289656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	4	B83,B86,C13,C76
typical_cds_rare	Chr2	75289679	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	C45,C87
lof_cds	Chr2	75289731	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B23,B70,C69
typical_cds_rare	Chr2	75289731	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B23,B70,C69
typical_cds_rare	Chr2	75289808	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	A10,B140,C67,C74,D10
typical_cds_rare	Chr2	75289850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	A24,A25,B67,B72,C34
typical_cds_rare	Chr2	75289852	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	B135,B87
typical_cds_rare	Chr2	75289893	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	A13,C59,D9
typical_cds_rare	Chr2	75289947	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	A21,B133,B4,B59,B78
typical_cds_rare	Chr2	75289951	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	C55,C59
typical_cds_rare	Chr2	75289969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	4	B10,B67,B83,B86
typical_cds_rare	Chr2	75289971	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B119,B82,D11
typical_cds_rare	Chr2	75289993	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C59
typical_cds_rare	Chr2	75289998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C87
typical_cds_rare	Chr2	75290024	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	4	B32,B39,B88,B92
lof_cds	Chr2	75290030	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	40	A16,A21,A23,A7,B10,B112,B120,B124,B125,B131,B136,B138,B14,B26,B32,B33,B34,B35,B42,B49,B55,B58,B7,B8,B90,B92,B95,B97,C1,C12,C26,C34,C60,C64,C72,C73,C86,C9,D10,D2
lof_cds	Chr2	75290032	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	34	A16,A21,A23,A7,B10,B112,B124,B136,B14,B26,B32,B33,B34,B35,B42,B49,B55,B58,B7,B8,B90,B95,B97,C1,C12,C26,C34,C60,C72,C73,C86,C9,D10,D2
lof_cds	Chr2	75290034	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	75	A1,A11,A16,A2,A20,A21,A23,A24,A25,A4,A7,A8,B10,B107,B11,B110,B112,B118,B120,B124,B136,B14,B18,B26,B3,B30,B33,B34,B35,B38,B42,B48,B49,B55,B56,B58,B59,B6,B62,B66,B68,B77,B78,B8,B90,B94,B95,B96,B97,B99,C12,C2,C20,C26,C27,C29,C30,C34,C35,C40,C52,C56,C59,C6,C61,C65,C72,C73,C77,C78,C81,C86,C9,D10,D3
typical_cds_rare	Chr2	75290080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	C3,C30
typical_cds_rare	Chr2	75290099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	B135
typical_cds_rare	Chr2	75290101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B22,C74,D1
typical_cds_rare	Chr2	75290109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C6
lof_cds	Chr2	75290131	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C18
typical_cds_rare	Chr2	75290131	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C18
lof_cds	Chr2	75290132	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	8	A2,B5,B51,B52,B61,B78,C33,C35
lof_cds	Chr2	75290136	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	79	A13,A18,A6,A8,A9,B101,B106,B107,B114,B117,B119,B122,B123,B125,B13,B131,B133,B137,B139,B14,B15,B21,B22,B30,B35,B38,B39,B40,B45,B46,B47,B51,B55,B57,B59,B63,B64,B65,B69,B7,B72,B75,B76,B77,B78,B83,B86,B89,B9,B98,B99,C10,C13,C16,C18,C19,C20,C21,C23,C27,C32,C33,C40,C41,C43,C46,C49,C5,C52,C53,C60,C64,C65,C68,C71,C73,C86,D11,D7
lof_cds	Chr2	75290140	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	86	A1,A11,A13,A15,A18,A19,A8,B100,B106,B108,B113,B115,B119,B12,B121,B122,B123,B126,B130,B132,B135,B138,B139,B21,B22,B23,B28,B3,B32,B36,B38,B39,B49,B50,B53,B57,B58,B60,B64,B65,B66,B7,B71,B72,B73,B83,B84,B85,B87,B88,B89,B9,B92,B93,B99,C14,C15,C16,C17,C21,C23,C26,C27,C29,C3,C31,C32,C34,C39,C40,C42,C46,C5,C52,C60,C68,C8,C80,C82,C84,D1,D10,D3,D5,D7,D9
lof_cds	Chr2	75290146	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	46	A14,A9,B107,B110,B124,B139,B15,B27,B37,B4,B5,B54,B59,B6,B63,B68,B74,B75,B85,B87,C18,C19,C24,C27,C31,C36,C38,C4,C41,C43,C49,C50,C55,C56,C61,C62,C63,C65,C66,C7,C74,C75,C9,D4,D6,D8
lof_cds	Chr2	75290149	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	33	A18,A8,B101,B106,B107,B110,B114,B122,B125,B131,B133,B15,B22,B35,B38,B47,B51,B54,B63,B65,B75,B9,B98,C10,C2,C23,C40,C43,C49,C52,C63,C73,D11
lof_cds	Chr2	75290151	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	17	A22,B1,B103,B104,B134,B2,B23,B24,B42,B43,B70,B72,C11,C51,C67,C69,C83
lof_cds	Chr2	75290163	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	68	A10,A22,A23,A25,A4,A7,B1,B101,B103,B104,B109,B119,B120,B129,B131,B134,B136,B14,B140,B18,B2,B20,B23,B24,B25,B42,B43,B44,B52,B55,B60,B70,B72,B84,B89,B91,B93,B95,C11,C16,C22,C25,C28,C3,C32,C34,C37,C44,C46,C47,C51,C53,C60,C67,C68,C69,C7,C70,C72,C79,C8,C82,C83,C84,C85,C86,D2,D9
lof_cds	Chr2	75290185	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	18	A21,B11,B117,B124,B139,B44,B60,B62,B68,B85,C22,C33,C41,C43,C47,C64,C65,C81
lof_cds	Chr2	75290189	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	17	A21,B11,B117,B124,B139,B44,B60,B62,B68,B85,C22,C33,C41,C43,C47,C64,C81
typical_cds_rare	Chr2	75290208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	B27
lof_cds	Chr2	75290228	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	130	A11,A14,A16,A2,A21,A22,A23,A25,A6,A7,A9,B1,B100,B102,B103,B107,B11,B112,B114,B117,B120,B121,B124,B128,B129,B13,B130,B131,B132,B134,B135,B136,B137,B139,B14,B140,B15,B19,B2,B23,B26,B30,B31,B32,B33,B34,B35,B36,B37,B41,B42,B43,B44,B46,B49,B50,B52,B53,B54,B55,B6,B60,B62,B68,B69,B7,B71,B72,B74,B75,B77,B78,B8,B81,B82,B83,B85,B86,B90,B91,B94,B96,B97,C1,C10,C12,C15,C2,C24,C25,C26,C30,C31,C33,C34,C36,C37,C38,C41,C47,C48,C5,C50,C51,C53,C60,C61,C62,C63,C64,C65,C67,C68,C69,C7,C72,C73,C76,C77,C8,C81,C82,C83,C85,C86,C9,D10,D2,D4,D6
lof_cds	Chr2	75290234	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	113	A11,A14,A16,A21,A22,A23,A7,A9,B100,B102,B103,B107,B11,B117,B120,B121,B124,B129,B13,B130,B131,B132,B135,B136,B137,B139,B14,B140,B15,B19,B2,B23,B26,B30,B31,B32,B33,B34,B36,B37,B42,B43,B44,B46,B49,B50,B51,B52,B53,B54,B55,B59,B6,B60,B62,B64,B68,B69,B7,B71,B74,B75,B77,B79,B8,B81,B82,B83,B85,B86,B90,B91,B96,B97,C1,C10,C12,C22,C25,C26,C30,C31,C33,C34,C36,C37,C38,C41,C47,C48,C51,C53,C60,C61,C62,C63,C67,C68,C69,C7,C72,C76,C8,C81,C82,C83,C85,C86,C9,D10,D2,D4,D6
typical_cds_rare	Chr2	75290250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	4	B132,B26,B82,C76
typical_cds_rare	Chr2	75290252	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	B128,B77
typical_cds_rare	Chr2	75290257	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	A2,B132,B26,B82,C76
typical_cds_rare	Chr2	75290284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B22,C74,D1
lof_cds	Chr2	75290307	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B127,B15,C18,C55,C59
typical_cds_rare	Chr2	75290307	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B127,B15,C18,C55,C59
typical_cds_rare	Chr2	75290309	TCC	*	INDEL	2bp_deletion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B127,B15,C18,C55,C59
typical_cds_rare	Chr2	75290313	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B88,C70,C84
typical_cds_rare	Chr2	75290366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	B104
lof_cds	Chr2	75290406	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	9	A15,B104,B27,B3,C25,C30,C40,C43,C69
lof_cds	Chr2	75290409	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	6	A15,B3,C30,C40,C43,C69
lof_cds	Chr2	75290411	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B104,B27,B41,B55,C25
typical_cds_rare	Chr2	75290411	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	5	B104,B27,B41,B55,C25
typical_cds_rare	Chr2	75290460	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	D7
typical_cds_rare	Chr2	75290483	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	B67,C18
typical_cds_rare	Chr2	75290494	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	B104
typical_cds_rare	Chr2	75290518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C14
typical_cds_rare	Chr2	75290557	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	A25
lof_cds	Chr2	75290568	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	B15
typical_cds_rare	Chr2	75290568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	B15
typical_cds_rare	Chr2	75290583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B121,B139,B84
typical_cds_rare	Chr2	75290587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	C44,C84
typical_cds_rare	Chr2	75290590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B126,B15,B96
lof_cds	Chr2	75290614	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	B101,B87
typical_cds_rare	Chr2	75290614	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	2	B101,B87
lof_cds	Chr2	75290616	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	146	A1,A10,A18,A19,A21,A22,A23,A5,A6,A7,A8,B1,B10,B101,B102,B103,B104,B106,B108,B109,B11,B112,B113,B114,B115,B117,B12,B120,B121,B122,B123,B124,B128,B13,B131,B133,B134,B136,B138,B14,B140,B17,B18,B19,B2,B21,B23,B24,B25,B27,B28,B29,B3,B31,B32,B33,B36,B37,B42,B43,B44,B45,B46,B47,B48,B52,B53,B55,B57,B58,B60,B62,B64,B65,B66,B68,B69,B7,B70,B75,B76,B77,B78,B86,B88,B89,B9,B91,B92,B95,B97,B99,C1,C11,C13,C15,C17,C18,C20,C21,C22,C25,C26,C27,C28,C29,C3,C30,C31,C34,C35,C36,C37,C40,C43,C46,C47,C5,C50,C51,C52,C54,C55,C58,C59,C6,C60,C64,C66,C67,C69,C72,C73,C74,C77,C79,C8,C81,C82,C83,C84,C86,D1,D10,D11,D2
lof_cds	Chr2	75290621	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	131	A1,A10,A18,A19,A21,A22,A23,A6,A7,A8,B1,B10,B101,B102,B103,B104,B106,B109,B11,B112,B113,B114,B115,B117,B12,B120,B121,B122,B123,B124,B128,B13,B131,B133,B134,B136,B138,B14,B140,B17,B18,B2,B23,B24,B25,B27,B29,B3,B31,B33,B36,B37,B42,B43,B44,B45,B46,B47,B48,B52,B55,B57,B58,B60,B62,B65,B66,B68,B69,B7,B70,B75,B76,B77,B78,B86,B9,B91,B95,B97,B99,C1,C11,C13,C15,C17,C18,C20,C21,C22,C23,C25,C26,C27,C28,C29,C30,C34,C35,C36,C37,C40,C43,C46,C47,C5,C51,C52,C55,C58,C59,C6,C60,C64,C66,C67,C69,C72,C73,C74,C77,C79,C8,C81,C82,C83,C84,C86,D10,D11,D2
lof_cds	Chr2	75290636	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B126,B139,B15
typical_cds_rare	Chr2	75290636	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	3	B126,B139,B15
typical_cds_rare	Chr2	75290663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009480	SmilChr02G005518	131009480	rna-XM_057936825.1	1	C18