source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	75309642	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	A14
typical_cds_rare	Chr2	75309642	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	A14
lof_cds	Chr2	75309673	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B65
typical_cds_rare	Chr2	75309673	TAG	T	INDEL	2bp_deletion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B65
typical_cds_rare	Chr2	75309705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	4	A11,B121,B86,C14
typical_cds_rare	Chr2	75309816	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B65
typical_cds_rare	Chr2	75309838	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B50
typical_cds_rare	Chr2	75309839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B65
typical_cds_rare	Chr2	75309866	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B6
typical_cds_rare	Chr2	75309873	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B6
typical_cds_rare	Chr2	75309884	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	5	A1,A8,B66,C27,C82
typical_cds_rare	Chr2	75309897	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B1,B140,C58
typical_cds_rare	Chr2	75309902	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B82
typical_cds_rare	Chr2	75309903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B78,B83,D3
typical_cds_rare	Chr2	75309990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B50
typical_cds_rare	Chr2	75310002	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B50
typical_cds_rare	Chr2	75310083	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	C14,C42
lof_cds	Chr2	75310219	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B96
typical_cds_rare	Chr2	75310219	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B96
typical_cds_rare	Chr2	75310224	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B139
lof_cds	Chr2	75310289	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	C19,C68
typical_cds_rare	Chr2	75310289	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	C19,C68
lof_cds	Chr2	75310329	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	48	A20,B100,B102,B103,B106,B108,B11,B113,B117,B124,B131,B135,B136,B138,B14,B18,B21,B25,B27,B33,B34,B43,B49,B57,B65,B68,B70,B8,B80,B82,B84,B87,B90,C14,C21,C25,C36,C41,C42,C43,C46,C49,C6,C68,C70,C72,C78,D7
typical_cds_rare	Chr2	75310332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	C23
lof_cds	Chr2	75310346	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	21	A20,A5,B100,B103,B108,B113,B135,B138,B18,B21,B27,B49,B65,B70,B80,B90,C6,C68,C78,C80,D7
lof_cds	Chr2	75310347	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	55	A21,A4,A9,B10,B106,B11,B117,B123,B128,B136,B14,B16,B23,B24,B25,B29,B3,B33,B34,B38,B4,B43,B56,B57,B68,B79,B8,B82,B87,C13,C15,C17,C21,C22,C25,C36,C38,C41,C43,C46,C49,C5,C53,C58,C61,C65,C69,C70,C72,C81,C82,C83,C9,D4,D8
lof_cds	Chr2	75310350	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B133,C39
typical_cds_rare	Chr2	75310350	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B133,C39
lof_cds	Chr2	75310351	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	79	A21,A24,A25,A3,A4,A7,B10,B11,B113,B114,B117,B12,B123,B124,B128,B13,B133,B135,B136,B14,B16,B22,B23,B24,B25,B27,B28,B29,B32,B33,B34,B36,B38,B4,B43,B57,B65,B68,B73,B77,B79,B81,B82,B84,B87,B90,B96,B97,C12,C13,C15,C16,C17,C22,C25,C30,C32,C36,C38,C39,C41,C43,C44,C46,C47,C48,C53,C58,C61,C62,C65,C70,C72,C82,C83,C9,D3,D4,D8
lof_cds	Chr2	75310353	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	6	A24,A25,B96,C16,C30,D3
lof_cds	Chr2	75310391	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B106,C21
typical_cds_rare	Chr2	75310391	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B106,C21
typical_cds_rare	Chr2	75310392	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B24,C48
lof_cds	Chr2	75310395	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B106,C21
typical_cds_rare	Chr2	75310395	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B106,C21
typical_cds_rare	Chr2	75310405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B69
lof_cds	Chr2	75310411	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B106,C21
typical_cds_rare	Chr2	75310411	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B106,C21
typical_cds_rare	Chr2	75310425	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B70
typical_cds_rare	Chr2	75310447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	4	B17,B90,B92,C26
lof_cds	Chr2	75310451	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	49	A23,A25,A6,A8,B107,B110,B114,B117,B131,B133,B139,B140,B15,B18,B30,B35,B37,B45,B48,B53,B54,B56,B6,B63,B69,B91,B96,B98,C10,C16,C2,C20,C21,C30,C34,C38,C4,C41,C5,C53,C64,C65,C67,C68,C7,C81,C84,C85,D3
lof_cds	Chr2	75310454	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	49	A23,A25,A6,A8,B107,B110,B114,B117,B131,B133,B139,B140,B15,B18,B30,B35,B37,B45,B48,B53,B54,B56,B6,B63,B69,B91,B96,B98,C10,C16,C2,C20,C21,C30,C34,C38,C4,C41,C5,C53,C64,C65,C67,C68,C7,C81,C84,C85,D3
lof_cds	Chr2	75310497	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B35
typical_cds_rare	Chr2	75310497	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B35
typical_cds_rare	Chr2	75310500	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B71
lof_cds	Chr2	75310501	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B71
typical_cds_rare	Chr2	75310501	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B71
lof_cds	Chr2	75310505	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B71
typical_cds_rare	Chr2	75310505	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B71
typical_cds_rare	Chr2	75310508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B71
typical_cds_rare	Chr2	75310548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	5	B44,B56,B96,C17,C9
typical_cds_rare	Chr2	75310551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	4	B56,B96,C17,C9
lof_cds	Chr2	75310588	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	7	A1,B112,B17,B45,C13,C84,D1
lof_cds	Chr2	75310591	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	7	A1,B112,B17,B45,C13,C84,D1
typical_cds_rare	Chr2	75310622	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B113,B24,C71
typical_cds_rare	Chr2	75310628	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	A21,C15,C30
typical_cds_rare	Chr2	75310648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	5	B107,B71,C1,C4,D10
typical_cds_rare	Chr2	75310653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B104,B117,B71
typical_cds_rare	Chr2	75310661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B119,B120,C3
typical_cds_rare	Chr2	75310705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B44,B66,C30
typical_cds_rare	Chr2	75310718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B44,B66,C30
lof_cds	Chr2	75310729	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B11,B85
typical_cds_rare	Chr2	75310729	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B11,B85
typical_cds_rare	Chr2	75310732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B11,B85
typical_cds_rare	Chr2	75310752	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	3	B121,B76,C86
typical_cds_rare	Chr2	75310758	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B63,B65
typical_cds_rare	Chr2	75310770	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B133
typical_cds_rare	Chr2	75312215	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	C6
typical_cds_rare	Chr2	75312219	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	D11
typical_cds_rare	Chr2	75312258	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	4	B21,B56,B96,C44
typical_cds_rare	Chr2	75312263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	4	B22,B50,B80,C38
typical_cds_rare	Chr2	75312264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B128,C6
typical_cds_rare	Chr2	75312268	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	2	B128,C6
lof_cds	Chr2	75312272	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	23	A1,A21,A22,B1,B103,B115,B120,B13,B134,B19,B2,B29,B41,B66,B94,B99,C11,C15,C17,C30,C48,C69,C83
lof_cds	Chr2	75312376	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	6	B12,B135,B58,B7,B93,C1
lof_cds	Chr2	75312378	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	6	B12,B135,B58,B7,B93,C1
lof_cds	Chr2	75312385	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	19	A22,B1,B102,B103,B134,B2,B23,B24,B42,B43,B70,B78,C11,C51,C58,C67,C69,C83,C84
lof_cds	Chr2	75312388	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	6	B12,B135,B58,B7,B93,C1
typical_cds_rare	Chr2	75312415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	5	B127,B15,C18,C55,C59
lof_cds	Chr2	75312460	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	120	A1,A11,A13,A14,A16,A19,A2,A20,A23,A25,A3,A4,A7,A8,A9,B1,B100,B102,B103,B108,B111,B115,B119,B123,B124,B125,B128,B129,B13,B131,B133,B134,B135,B136,B139,B14,B16,B18,B19,B2,B20,B25,B26,B28,B3,B31,B42,B43,B47,B50,B52,B58,B66,B7,B70,B71,B76,B8,B83,B85,B86,B88,B9,B91,B93,B95,B99,C1,C11,C12,C13,C14,C15,C17,C18,C23,C24,C25,C27,C28,C29,C3,C31,C37,C4,C40,C42,C44,C46,C48,C5,C50,C51,C54,C55,C58,C59,C6,C62,C64,C69,C7,C70,C71,C72,C76,C77,C78,C79,C81,C82,C83,C84,C9,D10,D11,D3,D4,D5,D7
lof_cds	Chr2	75312494	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B45
typical_cds_rare	Chr2	75312494	C	CCA	INDEL	2bp_insertion	CDS_variant	LOC131009485	SmilChr02G005523	131009485	rna-XM_057936830.1,rna-XM_057936831.1	1	B45