source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	1224349	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	17	A20,B103,B115,B12,B134,B136,B139,B14,B19,B24,B40,B59,B79,C1,C10,C20,C64
typical_cds_rare	Chr3	1224488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	D11
typical_cds_rare	Chr3	1224565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B2,C23
typical_cds_rare	Chr3	1224566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C82
typical_cds_rare	Chr3	1224574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B99,C38,C44
lof_cds	Chr3	1224588	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B3,B78
typical_cds_rare	Chr3	1224588	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B3,B78
lof_cds	Chr3	1224590	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B3,B78
typical_cds_rare	Chr3	1224590	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B3,B78
lof_cds	Chr3	1224594	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B3
typical_cds_rare	Chr3	1224594	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B3
typical_cds_rare	Chr3	1224605	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B64
typical_cds_rare	Chr3	1224608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B64,C19
lof_cds	Chr3	1224613	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	47	A11,A4,B103,B111,B112,B113,B115,B133,B134,B139,B14,B140,B24,B26,B27,B42,B49,B58,B59,B60,B79,B83,B86,B90,B92,B98,C10,C13,C14,C15,C19,C26,C28,C3,C31,C37,C4,C40,C45,C61,C65,C71,C72,C78,C87,D3,D4
lof_cds	Chr3	1224628	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B2
typical_cds_rare	Chr3	1224628	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B2
typical_cds_rare	Chr3	1224740	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	5	A18,B134,B52,C82,D11
typical_cds_rare	Chr3	1224775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C83
typical_cds_rare	Chr3	1224800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C83
typical_cds_rare	Chr3	1224807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B43,C71
typical_cds_rare	Chr3	1224812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	C41,C82
typical_cds_rare	Chr3	1224813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	4	B18,C41,C82,C86
typical_cds_rare	Chr3	1224815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	C41,C82
typical_cds_rare	Chr3	1224839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B131,B132,C79
typical_cds_rare	Chr3	1224902	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B85,C1,C21
typical_cds_rare	Chr3	1224918	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B90
typical_cds_rare	Chr3	1224922	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B1,B118,C48
typical_cds_rare	Chr3	1224942	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C5
lof_cds	Chr3	1224945	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	13	A10,A19,A7,A9,B120,B123,B72,B74,C1,C19,C24,C39,C45
typical_cds_rare	Chr3	1224948	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B64,C51,C87
typical_cds_rare	Chr3	1224959	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C5
typical_cds_rare	Chr3	1225026	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	5	B137,B18,B35,B7,C86
typical_cds_rare	Chr3	1225037	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B51,B73
typical_cds_rare	Chr3	1225088	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	4	B72,B83,C51,C70
typical_cds_rare	Chr3	1225120	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	B78
typical_cds_rare	Chr3	1225136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B112,B44,D3
typical_cds_rare	Chr3	1225151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B136,C5
typical_cds_rare	Chr3	1225190	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	5	B19,B53,B79,B89,C49
typical_cds_rare	Chr3	1225197	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B131,B44,C85
lof_cds	Chr3	1225244	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C80
typical_cds_rare	Chr3	1225244	G	GGT	INDEL	2bp_insertion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	1	C80
typical_cds_rare	Chr3	1225258	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B14,B65
lof_cds	Chr3	1225362	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	15	B10,B108,B11,B12,B2,B24,B47,B83,C26,C43,C44,C73,C78,C86,D6
lof_cds	Chr3	1225376	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B93,C42,C74
typical_cds_rare	Chr3	1225376	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B93,C42,C74
typical_cds_rare	Chr3	1225378	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	4	A18,B134,B52,C82
lof_cds	Chr3	1225380	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B93,C42
typical_cds_rare	Chr3	1225380	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B93,C42
typical_cds_rare	Chr3	1225388	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	2	B2,B24
typical_cds_rare	Chr3	1225413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	5	B131,C25,C26,C44,C73
lof_cds	Chr3	1225422	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	43	A13,A15,A6,B103,B107,B108,B109,B118,B128,B137,B139,B140,B35,B38,B39,B41,B47,B50,B56,B57,B59,B65,B69,B76,B9,B96,C10,C13,C20,C21,C24,C26,C37,C4,C41,C44,C46,C50,C54,C62,C70,C76,C86
lof_cds	Chr3	1225426	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	52	A13,A15,A6,B103,B107,B108,B109,B118,B128,B130,B137,B139,B140,B35,B36,B38,B39,B41,B47,B50,B56,B57,B59,B63,B65,B69,B76,B77,B9,B96,C10,C11,C13,C2,C20,C21,C24,C25,C26,C37,C4,C41,C44,C46,C50,C53,C54,C62,C69,C73,C76,C86
typical_cds_rare	Chr3	1225439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016908	SmilChr03G000002	131016908	rna-XM_057945709.1,rna-XM_057945710.1	3	B111,B131,C45