source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	78583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B35
typical_cds_rare	Chr3	78622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C68
typical_cds_rare	Chr3	78647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B35
typical_cds_rare	Chr3	78663	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	B122,C74,D10
typical_cds_rare	Chr3	78687	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B104,C84
typical_cds_rare	Chr3	78706	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B36,C10
typical_cds_rare	Chr3	78707	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C84
typical_cds_rare	Chr3	78721	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B117,C27
typical_cds_rare	Chr3	78769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C43
typical_cds_rare	Chr3	78785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	B110,C20,C31
typical_cds_rare	Chr3	78803	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A14,A19,B20
lof_cds	Chr3	78814	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	B36,C39,C69
typical_cds_rare	Chr3	78814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	B36,C39,C69
typical_cds_rare	Chr3	78818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	4	B36,B46,C39,D9
typical_cds_rare	Chr3	78820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	5	B110,C20,C23,C31,C78
typical_cds_rare	Chr3	78827	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B89
typical_cds_rare	Chr3	78842	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A5,C29,C43
typical_cds_rare	Chr3	78845	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	5	A19,B1,B36,B51,C39
lof_cds	Chr3	78854	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	13	A21,B104,B107,B131,B2,B43,B51,B96,C39,C47,C55,C56,D2
lof_cds	Chr3	78855	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	D11
typical_cds_rare	Chr3	78855	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	D11
typical_cds_rare	Chr3	78881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	A19,B20
lof_cds	Chr3	78916	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C25
typical_cds_rare	Chr3	78916	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C25
typical_cds_rare	Chr3	78948	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	A8
lof_cds	Chr3	78952	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A1,B111,B25
typical_cds_rare	Chr3	78952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A1,B111,B25
typical_cds_rare	Chr3	79020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	A5
lof_cds	Chr3	79044	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B89
typical_cds_rare	Chr3	79044	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B89
typical_cds_rare	Chr3	79067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B32,D9
lof_cds	Chr3	79185	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	6	B11,B130,B61,C20,C25,C74
lof_cds	Chr3	79188	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	13	B106,B129,B139,B21,B29,B36,B41,B9,C51,C52,C6,C78,C83
lof_cds	Chr3	79191	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	25	A20,B100,B112,B119,B122,B16,B25,B29,B41,B48,B51,B79,B90,C15,C16,C30,C45,C48,C6,C60,C61,C79,D1,D2,D9
lof_cds	Chr3	79193	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	42	A15,A20,B100,B103,B108,B112,B119,B122,B16,B25,B29,B41,B48,B51,B58,B65,B71,B73,B79,B90,C12,C15,C16,C28,C30,C31,C36,C45,C48,C53,C6,C60,C61,C68,C79,C82,C85,D1,D11,D2,D5,D9
lof_cds	Chr3	79194	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	19	A15,B103,B108,B12,B58,B65,B71,B73,B79,C12,C28,C31,C36,C53,C68,C82,C85,D11,D5
typical_cds_rare	Chr3	79209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B128
typical_cds_rare	Chr3	79229	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B98
lof_cds	Chr3	79236	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	122	A10,A11,A22,A24,A25,A5,A7,B1,B100,B102,B106,B11,B110,B111,B112,B113,B119,B120,B122,B125,B126,B127,B130,B131,B134,B136,B138,B140,B15,B17,B2,B20,B21,B23,B24,B27,B28,B29,B30,B31,B32,B34,B35,B37,B4,B41,B44,B45,B46,B48,B49,B5,B51,B55,B57,B58,B60,B64,B67,B70,B72,B73,B74,B75,B76,B79,B81,B82,B83,B85,B88,B9,B90,B91,B92,B95,B98,C1,C11,C15,C18,C19,C21,C23,C26,C29,C30,C31,C32,C33,C37,C41,C44,C45,C47,C48,C5,C51,C52,C57,C6,C60,C63,C64,C66,C67,C68,C7,C72,C73,C74,C78,C79,C8,C80,C85,C87,D10,D11,D2,D4,D5
lof_cds	Chr3	79240	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	6	B62,B95,C34,C44,C63,C81
typical_cds_rare	Chr3	79243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	A7,C30
typical_cds_rare	Chr3	79253	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B98
typical_cds_rare	Chr3	79263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C27
lof_cds	Chr3	79313	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	116	A1,A10,A16,A22,A24,A25,A5,A6,A8,B102,B106,B107,B113,B120,B122,B130,B132,B134,B135,B136,B138,B140,B15,B17,B19,B2,B20,B21,B23,B24,B25,B27,B28,B3,B30,B31,B32,B34,B35,B38,B39,B4,B45,B46,B48,B49,B54,B55,B57,B59,B60,B63,B64,B65,B67,B68,B72,B74,B81,B82,B83,B85,B86,B88,B9,B91,B92,B95,B97,B98,B99,C10,C13,C15,C18,C19,C23,C26,C29,C30,C33,C35,C36,C37,C40,C41,C42,C44,C45,C48,C5,C51,C54,C56,C57,C58,C59,C6,C63,C64,C66,C7,C70,C72,C73,C74,C77,C79,C81,C82,C85,C87,D10,D11,D4,D9
lof_cds	Chr3	79321	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	10	A22,A24,A5,B17,B20,B30,B65,C33,C37,C5
typical_cds_rare	Chr3	79328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A4,B1,B89
typical_cds_rare	Chr3	79332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C71
typical_cds_rare	Chr3	79554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	4	B22,B83,C39,C52
typical_cds_rare	Chr3	79576	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B127
typical_cds_rare	Chr3	79585	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	C31
lof_cds	Chr3	79611	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A3,B18,B78
typical_cds_rare	Chr3	79611	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	3	A3,B18,B78
typical_cds_rare	Chr3	79649	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	4	B2,B46,B53,C66
typical_cds_rare	Chr3	79656	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	1	B127
lof_cds	Chr3	79660	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	13	A10,A14,B112,B135,B67,B80,C25,C27,C35,C40,C42,C67,C69
lof_cds	Chr3	79701	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B94,C42
typical_cds_rare	Chr3	79701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B94,C42
typical_cds_rare	Chr3	79723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	5	A20,B120,B59,C34,C59
lof_cds	Chr3	79733	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	11	B128,B139,B25,B63,B83,B95,B98,C1,C59,C9,D8
typical_cds_rare	Chr3	79742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016889	SmilChr03G000005	131016889	rna-XM_057945677.1	2	B85,C28