source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	1027427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	B52,C10,C23,C29
lof_cds	Chr3	1027434	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	C71
typical_cds_rare	Chr3	1027434	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	C71
lof_cds	Chr3	1027453	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B105
typical_cds_rare	Chr3	1027453	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B105
lof_cds	Chr3	1027457	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B13
typical_cds_rare	Chr3	1027457	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B13
typical_cds_rare	Chr3	1027459	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B8
typical_cds_rare	Chr3	1027464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B65
typical_cds_rare	Chr3	1027469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B18,B74,C39
typical_cds_rare	Chr3	1027501	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B115,B126,B91
lof_cds	Chr3	1027519	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	38	A15,A19,A20,A21,A24,B111,B112,B122,B128,B22,B31,B36,B38,B39,B43,B52,B6,B61,B77,B80,B83,B86,B88,B97,C10,C14,C23,C24,C29,C48,C51,C55,C61,C7,C71,C77,C9,D7
typical_cds_rare	Chr3	1027531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	2	B114,B25
typical_cds_rare	Chr3	1027546	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	B27,B40,C53,C85
lof_cds	Chr3	1027563	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	22	A15,A19,A21,B128,B22,B31,B35,B36,B38,B6,B61,B77,B80,B83,B86,B97,C14,C35,C61,C7,C87,C9
typical_cds_rare	Chr3	1027575	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	A24,C74,D3
typical_cds_rare	Chr3	1027580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B122,B27,C28
lof_cds	Chr3	1027586	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B22
typical_cds_rare	Chr3	1027586	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B22
typical_cds_rare	Chr3	1027589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	B16,B24,C8,D9
typical_cds_rare	Chr3	1027610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B22
typical_cds_rare	Chr3	1027620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	2	A9,D8
typical_cds_rare	Chr3	1027627	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B7,C39,C59
typical_cds_rare	Chr3	1027678	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	B28,B70,C69,C70
typical_cds_rare	Chr3	1028499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B122
typical_cds_rare	Chr3	1028506	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	D3
lof_cds	Chr3	1028510	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	9	A11,B3,B35,B56,B63,B95,B96,C19,C60
typical_cds_rare	Chr3	1028518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B114,C84,C85
typical_cds_rare	Chr3	1028533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	2	B123,C26
typical_cds_rare	Chr3	1028555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	5	B1,B122,B13,C28,C67
typical_cds_rare	Chr3	1028577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	B81
typical_cds_rare	Chr3	1028621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	5	B103,B28,B64,B7,D1
typical_cds_rare	Chr3	1028650	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	5	A15,B1,C28,C36,C87
typical_cds_rare	Chr3	1028652	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	A14,C14,C33,C87
typical_cds_rare	Chr3	1028664	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	5	A14,C14,C33,C71,C87
typical_cds_rare	Chr3	1028669	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	1	C8
typical_cds_rare	Chr3	1028684	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B112,C64,C66
typical_cds_rare	Chr3	1028692	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	A14,C14,C33,C87
lof_cds	Chr3	1028708	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	25	A20,A24,B105,B11,B110,B118,B120,B124,B136,B21,B58,B84,B91,C1,C24,C33,C35,C43,C49,C51,C54,C76,C85,C86,D3
lof_cds	Chr3	1028711	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B122,B53,C72
typical_cds_rare	Chr3	1028711	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	B122,B53,C72
typical_cds_rare	Chr3	1028719	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	4	B115,B78,B89,C10
typical_cds_rare	Chr3	1028724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	5	A14,B8,C14,C33,C87
typical_cds_rare	Chr3	1028819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1,rna-XM_057945755.1	3	A14,B126,C33
lof_cds	Chr3	1028873	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	41	A10,A16,A5,B102,B103,B111,B12,B121,B123,B13,B130,B137,B18,B22,B35,B4,B46,B54,B55,B62,B63,B71,B74,B75,B83,B9,B97,C11,C16,C22,C26,C3,C46,C51,C65,C69,C9,D1,D10,D2,D7
lof_cds	Chr3	1028880	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	B127,B129
typical_cds_rare	Chr3	1028880	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	B127,B129
typical_cds_rare	Chr3	1028883	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	A11,D7
typical_cds_rare	Chr3	1028898	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	1	C44
lof_cds	Chr3	1028927	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	14	A13,B30,B31,B48,B61,B63,B83,B86,C26,C35,C36,C42,C70,D2
typical_cds_rare	Chr3	1028944	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	B1,C68
lof_cds	Chr3	1028950	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	A22,B102
typical_cds_rare	Chr3	1028950	C	CTA	INDEL	2bp_insertion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	A22,B102
typical_cds_rare	Chr3	1028969	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	3	B13,B41,C48
lof_cds	Chr3	1028973	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	4	B49,C55,C57,C61
typical_cds_rare	Chr3	1028973	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	4	B49,C55,C57,C61
typical_cds_rare	Chr3	1028993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	1	C80
lof_cds	Chr3	1028998	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	31	A4,B108,B109,B110,B111,B119,B125,B130,B133,B15,B22,B35,B57,B7,B80,B91,B94,B97,C11,C13,C17,C22,C30,C31,C40,C61,C67,C68,C69,C74,C76
typical_cds_rare	Chr3	1029018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	2	C69,D2
typical_cds_rare	Chr3	1029023	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016942	SmilChr03G000091	131016942	rna-XM_057945754.1	4	B105,B133,B9,D4