source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	1309980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B41
lof_cds	Chr3	1310124	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	17	A11,B102,B114,B129,B16,B33,B70,B83,B90,B92,B97,C16,C3,C59,C74,D2,D9
lof_cds	Chr3	1310126	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	17	A11,B102,B114,B129,B16,B33,B70,B83,B90,B92,B97,C16,C3,C59,C74,D2,D9
lof_cds	Chr3	1310137	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	33	A16,A21,A24,A9,B107,B133,B18,B26,B3,B4,B40,B46,B55,B56,B63,B74,B83,B86,B95,B96,B97,C11,C12,C18,C2,C31,C39,C51,C61,C65,C87,D11,D7
lof_cds	Chr3	1310139	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	33	A16,A21,A24,A9,B107,B133,B18,B26,B3,B4,B40,B46,B55,B56,B63,B74,B83,B86,B95,B96,B97,C11,C12,C18,C2,C31,C39,C51,C61,C65,C87,D11,D7
lof_cds	Chr3	1310232	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B28
typical_cds_rare	Chr3	1310232	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B28
lof_cds	Chr3	1310260	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B107
typical_cds_rare	Chr3	1310260	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B107
typical_cds_rare	Chr3	1310278	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C75
typical_cds_rare	Chr3	1310287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B10,B128,B47,C75,D6
typical_cds_rare	Chr3	1310344	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	A21,C33,C68
lof_cds	Chr3	1310371	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A21,C68
typical_cds_rare	Chr3	1310371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A21,C68
typical_cds_rare	Chr3	1310394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C68
lof_cds	Chr3	1310398	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C85
typical_cds_rare	Chr3	1310398	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C85
lof_cds	Chr3	1310431	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	25	A16,A21,A24,A9,B107,B133,B18,B26,B3,B40,B46,B56,B63,B65,B74,B83,B86,B96,C12,C18,C2,C39,C61,C65,C87
lof_cds	Chr3	1310444	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	7	A21,A7,B101,B130,B26,D4,D5
typical_cds_rare	Chr3	1310464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	B55,C31,D11
typical_cds_rare	Chr3	1310466	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	A6
lof_cds	Chr3	1310530	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	11	B55,B77,C17,C27,C3,C30,C31,C5,C75,C76,D11
lof_cds	Chr3	1310573	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B128
typical_cds_rare	Chr3	1310573	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B128
typical_cds_rare	Chr3	1310660	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B92,C48
typical_cds_rare	Chr3	1310661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	A14
typical_cds_rare	Chr3	1310667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B55,B92,C31,C48
typical_cds_rare	Chr3	1310668	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A24,B46
lof_cds	Chr3	1310704	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	7	A7,B77,C17,C27,C30,C75,C76
typical_cds_rare	Chr3	1310730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	A23
typical_cds_rare	Chr3	1310731	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C32
lof_cds	Chr3	1310760	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B130,B57
typical_cds_rare	Chr3	1310760	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B130,B57
lof_cds	Chr3	1310777	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	14	A2,A8,B134,B17,B27,B30,B48,B50,B93,C35,C41,C50,C53,C82
typical_cds_rare	Chr3	1310784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B77,C17,C27,C30
lof_cds	Chr3	1310866	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C21
typical_cds_rare	Chr3	1310866	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C21
lof_cds	Chr3	1310869	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B38,C14
typical_cds_rare	Chr3	1310869	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B38,C14
lof_cds	Chr3	1310890	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B119
typical_cds_rare	Chr3	1310890	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B119
typical_cds_rare	Chr3	1310891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B105,C33
typical_cds_rare	Chr3	1310899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B119,B38,C14,C65
lof_cds	Chr3	1310914	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	10	B39,B47,B51,B6,B88,C19,C40,C56,C65,D1
typical_cds_rare	Chr3	1310962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B26,B54,B60,C68,C77
lof_cds	Chr3	1310980	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B100,B104,B24,C13
typical_cds_rare	Chr3	1310980	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B100,B104,B24,C13
typical_cds_rare	Chr3	1311005	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B41,C28
lof_cds	Chr3	1311010	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	A23,C1,C52,C57,D9
typical_cds_rare	Chr3	1311010	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	A23,C1,C52,C57,D9
typical_cds_rare	Chr3	1311013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	A23,B78,C24,C49
lof_cds	Chr3	1311034	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	B30,B6,B72
typical_cds_rare	Chr3	1311034	A	ACG	INDEL	2bp_insertion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	B30,B6,B72
typical_cds_rare	Chr3	1311079	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	A1,B128,B132,B43
typical_cds_rare	Chr3	1311094	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	C61,C83,D11
typical_cds_rare	Chr3	1311098	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B35,B55
typical_cds_rare	Chr3	1311103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	B139,C7,C72
typical_cds_rare	Chr3	1311123	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B100,B104,B24,B38,C13
typical_cds_rare	Chr3	1311147	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B127,B131,B133,B41,B42
typical_cds_rare	Chr3	1311193	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C9
typical_cds_rare	Chr3	1311225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	C48,D3
typical_cds_rare	Chr3	1311328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	A3,A7,B33
typical_cds_rare	Chr3	1311346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B10,B104
typical_cds_rare	Chr3	1311390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	A8,B30,B83,C26
typical_cds_rare	Chr3	1311397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A8,B134
typical_cds_rare	Chr3	1311456	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	C22,C39,C59,D8
typical_cds_rare	Chr3	1311505	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	D11
typical_cds_rare	Chr3	1311513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	A2,B104,B98,C74
typical_cds_rare	Chr3	1311516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A2,B104
typical_cds_rare	Chr3	1311538	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A2,B104
typical_cds_rare	Chr3	1311613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	A11,B40,B93,C53
lof_cds	Chr3	1311617	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	A24
typical_cds_rare	Chr3	1311617	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	A24
lof_cds	Chr3	1311623	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	7	A22,B138,B14,B37,C34,C45,C78
typical_cds_rare	Chr3	1311652	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C7
lof_cds	Chr3	1311687	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B133,B77,C30,C83
typical_cds_rare	Chr3	1311687	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B133,B77,C30,C83
typical_cds_rare	Chr3	1311717	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C78
typical_cds_rare	Chr3	1311720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C78
typical_cds_rare	Chr3	1311832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C30
typical_cds_rare	Chr3	1311857	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	A24,B16,B58,B60,C86
lof_cds	Chr3	1311860	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	A20,B68,B85,C22,C80
typical_cds_rare	Chr3	1311860	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	A20,B68,B85,C22,C80
lof_cds	Chr3	1311872	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	6	B134,B70,C15,C37,C79,D9
typical_cds_rare	Chr3	1311879	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B108,B90,C1,C81
typical_cds_rare	Chr3	1311904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B119,B133,B23,B99
typical_cds_rare	Chr3	1311932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B31,B78
typical_cds_rare	Chr3	1311936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C63
typical_cds_rare	Chr3	1311954	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B113,B134,B17,B27,C82
typical_cds_rare	Chr3	1311959	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	C63,C67
typical_cds_rare	Chr3	1311967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B113,B134,B17,B27,C82
typical_cds_rare	Chr3	1311968	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	A21,C39,C52
typical_cds_rare	Chr3	1311972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B14,B43,C54,C80,C84
lof_cds	Chr3	1312113	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	18	B100,B115,B128,B14,B35,B47,B62,B73,B83,B84,C32,C43,C47,C48,C49,C54,C62,C8
lof_cds	Chr3	1312126	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	67	A10,A13,A14,A19,A2,A22,A24,A7,A8,B10,B109,B111,B113,B115,B126,B128,B129,B134,B137,B139,B14,B16,B17,B21,B27,B28,B3,B30,B31,B47,B48,B50,B52,B57,B60,B61,B63,B72,B91,B93,B95,B96,B98,C12,C17,C21,C27,C34,C35,C36,C40,C41,C42,C44,C45,C5,C56,C70,C73,C78,C79,C82,C86,C87,D10,D2,D5
lof_cds	Chr3	1312127	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	63	A10,A13,A14,A19,A2,A22,A24,A7,A8,B10,B109,B111,B113,B115,B126,B128,B134,B137,B139,B14,B16,B21,B27,B28,B3,B30,B31,B47,B48,B52,B57,B61,B63,B72,B91,B93,B95,B96,B98,C12,C17,C21,C23,C27,C34,C35,C36,C40,C41,C42,C44,C45,C5,C70,C73,C78,C79,C82,C86,C87,D10,D2,D5
lof_cds	Chr3	1312130	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	16	B100,B115,B128,B14,B35,B47,B62,B73,B83,C32,C43,C47,C49,C54,C62,C8
typical_cds_rare	Chr3	1312161	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B114,B25,C41,C84
typical_cds_rare	Chr3	1312214	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B31,B65,C6,C82
lof_cds	Chr3	1312234	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	18	A25,A7,A9,B134,B29,B63,B77,B8,B94,B95,B97,C12,C41,C58,C78,C81,C82,C84
typical_cds_rare	Chr3	1312240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	B95,C82,C84
lof_cds	Chr3	1312246	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B93
typical_cds_rare	Chr3	1312246	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B93
typical_cds_rare	Chr3	1312269	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B52,C45
typical_cds_rare	Chr3	1312311	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	3	B85,C30,C64
lof_cds	Chr3	1312333	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	31	A10,A14,A24,B105,B126,B133,B137,B16,B17,B21,B27,B28,B31,B48,B50,B52,B56,B57,B60,B63,C10,C12,C21,C30,C34,C35,C41,C44,C56,C86,C87
typical_cds_rare	Chr3	1312373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B50,B56,C12,C58
typical_cds_rare	Chr3	1312377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C83
lof_cds	Chr3	1312380	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B50
typical_cds_rare	Chr3	1312380	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B50
lof_cds	Chr3	1312404	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	17	A14,A9,B11,B128,B137,B48,B52,B77,B85,B95,C22,C36,C42,C52,C57,C68,D9
lof_cds	Chr3	1312406	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	28	A20,A25,A3,A4,A6,A7,B102,B104,B123,B130,B136,B19,B26,B40,B53,B64,B72,B79,B80,B97,C24,C27,C29,C41,C50,C6,C69,C77
lof_cds	Chr3	1312407	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	11	A20,B109,B2,B54,B61,B64,B9,C49,C68,C76,C85
typical_cds_rare	Chr3	1312464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	B99
lof_cds	Chr3	1312470	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	94	A14,A20,A21,A23,A25,A3,A4,A6,A7,A8,A9,B102,B104,B105,B109,B11,B119,B12,B123,B130,B132,B133,B136,B137,B140,B16,B19,B2,B26,B29,B3,B40,B45,B48,B5,B52,B53,B54,B55,B6,B61,B64,B72,B77,B79,B80,B85,B89,B9,B90,B92,B95,B97,C10,C13,C19,C20,C21,C22,C24,C25,C27,C29,C31,C32,C36,C39,C41,C42,C49,C50,C52,C55,C57,C6,C61,C65,C68,C69,C74,C76,C77,C78,C79,C8,C82,C85,C9,D10,D11,D3,D6,D7,D9
lof_cds	Chr3	1312472	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	94	A14,A20,A21,A23,A25,A3,A4,A6,A7,A8,A9,B102,B104,B105,B109,B11,B119,B12,B123,B130,B132,B133,B136,B137,B140,B16,B19,B2,B26,B29,B3,B40,B45,B48,B5,B52,B53,B54,B55,B6,B61,B64,B72,B77,B79,B80,B85,B89,B9,B90,B92,B95,B97,C10,C13,C19,C20,C21,C22,C24,C25,C27,C29,C31,C32,C36,C39,C41,C42,C49,C50,C52,C55,C57,C6,C61,C65,C68,C69,C74,C76,C77,C78,C79,C8,C82,C85,C9,D10,D11,D3,D6,D7,D9
lof_cds	Chr3	1312484	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	6	B104,B26,B5,B53,B64,C24
typical_cds_rare	Chr3	1312497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	B104,B24,C74,D8
lof_cds	Chr3	1312556	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	40	A14,B102,B123,B125,B130,B15,B20,B28,B34,B38,B42,B43,B46,B5,B50,B6,B60,B74,B76,B92,B94,C1,C11,C13,C14,C16,C19,C24,C3,C37,C41,C49,C50,C56,C62,C65,C67,C71,D11,D6
typical_cds_rare	Chr3	1312565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	D11
typical_cds_rare	Chr3	1312567	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	C28,C32,C59,C68
lof_cds	Chr3	1312574	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	10	B40,B57,C14,C2,C31,C41,C56,C63,C67,C87
typical_cds_rare	Chr3	1312591	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A14,C33
lof_cds	Chr3	1312634	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	10	A16,B119,B129,B137,B138,B74,C24,C62,C66,C85
typical_cds_rare	Chr3	1312687	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B31,C64
typical_cds_rare	Chr3	1312763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C13
typical_cds_rare	Chr3	1312766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	A11,C58
typical_cds_rare	Chr3	1312794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	1	C2
typical_cds_rare	Chr3	1312808	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B52,C23
lof_cds	Chr3	1312825	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	100	A18,A21,A24,A25,A6,A9,B10,B103,B104,B107,B111,B113,B115,B12,B120,B122,B126,B13,B132,B138,B16,B18,B2,B23,B24,B26,B29,B33,B36,B38,B4,B40,B41,B42,B43,B45,B5,B52,B53,B54,B55,B6,B64,B65,B71,B72,B73,B74,B77,B78,B81,B82,B83,B90,B92,B95,B97,B98,C1,C11,C13,C14,C16,C17,C18,C2,C24,C27,C28,C30,C39,C44,C46,C47,C48,C49,C5,C50,C51,C53,C55,C57,C58,C61,C63,C64,C65,C69,C7,C71,C74,C75,C76,C77,C78,C85,C86,C87,D2,D9
lof_cds	Chr3	1312829	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	96	A18,A21,A24,A25,A6,A9,B10,B103,B104,B107,B111,B113,B115,B12,B120,B122,B126,B13,B132,B138,B16,B2,B23,B24,B26,B29,B33,B38,B4,B40,B41,B42,B43,B45,B52,B53,B54,B55,B6,B64,B65,B71,B72,B73,B77,B78,B81,B82,B83,B90,B92,B97,B98,C1,C11,C13,C14,C16,C17,C18,C2,C24,C27,C28,C30,C33,C37,C39,C44,C47,C48,C49,C5,C50,C51,C53,C55,C56,C57,C58,C61,C63,C64,C65,C69,C7,C71,C74,C75,C76,C78,C85,C86,C87,D2,D9
typical_cds_rare	Chr3	1312843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	2	B22,B76
lof_cds	Chr3	1312857	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B140,B65,B73,C40,C43
typical_cds_rare	Chr3	1312857	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	5	B140,B65,B73,C40,C43
typical_cds_rare	Chr3	1312863	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016793	SmilChr03G000121	131016793	rna-XM_057945526.1,rna-XM_057945527.1	4	C64,C66,C87,D3