source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	2298462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	C23
lof_cds	Chr3	2298463	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B11,C1,D3
typical_cds_rare	Chr3	2298463	C	CGA	INDEL	2bp_insertion	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B11,C1,D3
lof_cds	Chr3	2298472	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	30	A18,A20,A7,B1,B103,B106,B110,B120,B123,B124,B139,B33,B41,B53,B59,B8,B87,B9,B93,B99,C10,C16,C32,C42,C53,C68,C69,C7,C74,C77
typical_cds_rare	Chr3	2298474	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B105,B22,B6,B96
typical_cds_rare	Chr3	2298497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B135,B23,C48,C85
typical_cds_rare	Chr3	2298503	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	B126,C21
typical_cds_rare	Chr3	2298510	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	B2
typical_cds_rare	Chr3	2298519	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	5	A16,B140,B81,B9,C27
lof_cds	Chr3	2298532	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	191	A1,A10,A11,A13,A14,A15,A18,A19,A2,A20,A21,A23,A24,A25,A3,A4,A5,A7,A9,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B118,B119,B120,B121,B122,B123,B124,B125,B127,B128,B13,B130,B132,B135,B136,B138,B139,B14,B140,B15,B17,B18,B19,B2,B21,B22,B23,B24,B26,B27,B28,B32,B33,B34,B35,B36,B37,B39,B4,B40,B41,B45,B46,B5,B50,B51,B52,B53,B55,B57,B58,B59,B6,B61,B63,B64,B65,B66,B67,B69,B7,B73,B74,B75,B76,B78,B79,B8,B80,B81,B83,B84,B86,B87,B88,B9,B91,B93,B94,B95,B97,B98,C1,C10,C11,C13,C14,C16,C17,C18,C2,C20,C22,C23,C24,C25,C27,C29,C3,C30,C31,C32,C34,C36,C37,C38,C4,C40,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C72,C73,C74,C75,C76,C77,C78,C79,C81,C82,C83,C87,D1,D10,D2,D3,D4,D6,D8,D9
typical_cds_rare	Chr3	2298553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B100,B24,C38
typical_cds_rare	Chr3	2298559	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B117,B31,B34
typical_cds_rare	Chr3	2298634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	5	B132,B29,B92,C21,C23
typical_cds_rare	Chr3	2298662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	D6
typical_cds_rare	Chr3	2298681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	A24,B118,C61
typical_cds_rare	Chr3	2298687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B64,B91,C78,C85
typical_cds_rare	Chr3	2298691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B29,B44,B89,C23
typical_cds_rare	Chr3	2298704	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	A15,C36,C58,C81
typical_cds_rare	Chr3	2298705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	C58
typical_cds_rare	Chr3	2298707	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	C2,C68
typical_cds_rare	Chr3	2298722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	B58,C73
typical_cds_rare	Chr3	2298726	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B135,B23,B78,C48
typical_cds_rare	Chr3	2298747	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	5	B29,B44,B89,C21,C73
typical_cds_rare	Chr3	2298781	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B63,B83,C21,C73
typical_cds_rare	Chr3	2298784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B128,B95,C6,C70
typical_cds_rare	Chr3	2298786	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	B108
typical_cds_rare	Chr3	2298826	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B100,B16,B77
typical_cds_rare	Chr3	2298855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	5	A16,B11,B26,B4,B43
lof_cds	Chr3	2298866	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	61	A13,A2,A20,B107,B117,B118,B122,B127,B129,B134,B137,B139,B17,B19,B21,B22,B25,B28,B31,B33,B34,B35,B43,B46,B48,B52,B57,B59,B61,B62,B65,B7,B70,B72,B82,B83,B88,B95,B97,C1,C13,C18,C19,C26,C30,C31,C35,C41,C43,C56,C62,C63,C7,C75,C76,C77,C8,C87,D10,D2,D5
lof_cds	Chr3	2298869	T	TTG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	62	A13,A2,A20,B107,B117,B118,B122,B127,B129,B137,B139,B17,B19,B21,B22,B25,B28,B31,B33,B34,B35,B43,B46,B48,B52,B57,B59,B61,B62,B65,B7,B70,B72,B82,B83,B88,B95,B97,C1,C13,C18,C19,C26,C30,C31,C35,C36,C41,C43,C56,C58,C62,C63,C7,C75,C76,C77,C8,C87,D10,D2,D5
lof_cds	Chr3	2298884	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	C2,C82
typical_cds_rare	Chr3	2298884	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	C2,C82
lof_cds	Chr3	2298889	A	AGG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	18	A25,A5,B126,B128,B35,B38,B45,B7,B80,B85,B87,B94,B95,C46,C60,C63,C64,C66
lof_cds	Chr3	2298891	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	15	A11,A13,A19,A6,B112,B115,B23,B83,B85,C37,C39,C59,C66,C74,C9
typical_cds_rare	Chr3	2301598	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	5	B56,B63,B71,B95,C62
typical_cds_rare	Chr3	2301599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	5	B119,B128,B138,B40,C24
typical_cds_rare	Chr3	2301613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	A21,A24,B46,C61
typical_cds_rare	Chr3	2301623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	C19
typical_cds_rare	Chr3	2301648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	A21,A24,B46,C29
typical_cds_rare	Chr3	2301649	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B136,B64,C18,C49
typical_cds_rare	Chr3	2301660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	C46
typical_cds_rare	Chr3	2301662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	A2,C33,D3
lof_cds	Chr3	2301664	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	17	A2,A20,B111,B120,B124,B63,B65,B78,B83,B97,C20,C40,C6,C7,C72,C74,D2
typical_cds_rare	Chr3	2301678	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B113,B44,B71
typical_cds_rare	Chr3	2301694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	1	B101
typical_cds_rare	Chr3	2302164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	3	B135,C48,D1
typical_cds_rare	Chr3	2302186	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	5	A16,B21,C35,C5,C80
typical_cds_rare	Chr3	2302187	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	5	A16,B21,C35,C5,C80
lof_cds	Chr3	2302198	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	45	A1,A14,A20,A22,A5,B1,B103,B119,B124,B127,B13,B138,B14,B26,B27,B28,B32,B37,B38,B41,B48,B51,B58,B59,B64,B68,B8,B98,B99,C10,C14,C24,C3,C32,C34,C41,C45,C49,C68,C7,C73,C74,C77,C78,D6
lof_cds	Chr3	2302202	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B22,C24,C78,C85
typical_cds_rare	Chr3	2302202	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B22,C24,C78,C85
typical_cds_rare	Chr3	2302210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	4	B123,B71,C27,C76
lof_cds	Chr3	2302218	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	B35,B46
typical_cds_rare	Chr3	2302218	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	2	B35,B46
typical_cds_rare	Chr3	2302220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	3	B12,D10,D6
lof_cds	Chr3	2302243	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1,rna-XM_057945627.1	13	A1,A8,B10,B15,B2,B46,B53,B75,B78,B81,C33,C61,D9
lof_cds	Chr3	2302260	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	9	A2,A8,B26,B57,B77,B93,C21,C53,C9
lof_cds	Chr3	2302274	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	6	A23,B102,B125,C26,C44,D5
typical_cds_rare	Chr3	2302298	TG	*	INDEL	1bp_deletion	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	4	B20,B42,B43,B5
typical_cds_rare	Chr3	2302302	TAA	*	INDEL	2bp_deletion	CDS_variant	LOC131016850	SmilChr03G000203	131016850	rna-XM_057945626.1	4	B20,B42,B43,B5