source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	2610583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	B120,C72,D2
lof_cds	Chr3	2610618	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	6	B85,C33,C63,C64,C66,D5
lof_cds	Chr3	2610631	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B12,C87
typical_cds_rare	Chr3	2610631	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B12,C87
lof_cds	Chr3	2610672	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	121	A11,A15,A16,A19,A22,A6,A9,B1,B102,B105,B11,B111,B114,B119,B12,B120,B121,B123,B124,B125,B129,B130,B131,B132,B136,B137,B15,B19,B20,B22,B25,B28,B29,B3,B32,B34,B36,B38,B39,B40,B42,B43,B44,B46,B47,B49,B5,B52,B55,B56,B6,B61,B62,B63,B64,B69,B71,B72,B75,B79,B81,B83,B84,B85,B88,B90,B91,B92,B94,B98,C1,C11,C14,C16,C18,C2,C21,C22,C24,C28,C3,C31,C32,C33,C34,C36,C37,C39,C4,C40,C44,C45,C47,C49,C5,C54,C55,C59,C6,C61,C62,C63,C64,C65,C66,C68,C69,C7,C70,C74,C78,C79,C8,C80,C84,C86,C87,D1,D11,D3,D4
lof_cds	Chr3	2610684	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	168	A10,A11,A13,A14,A15,A16,A18,A19,A2,A22,A4,A9,B1,B100,B101,B103,B104,B105,B107,B108,B109,B11,B111,B112,B113,B114,B115,B119,B121,B122,B126,B128,B129,B13,B132,B134,B135,B137,B138,B139,B14,B140,B16,B17,B18,B19,B20,B21,B22,B23,B25,B26,B27,B29,B30,B31,B34,B35,B36,B37,B38,B4,B40,B41,B42,B45,B46,B48,B49,B5,B50,B54,B57,B6,B60,B61,B63,B64,B68,B69,B70,B71,B72,B74,B76,B77,B80,B81,B85,B88,B89,B9,B91,B92,B93,B94,B95,B98,B99,C1,C11,C12,C13,C14,C15,C17,C21,C22,C25,C26,C27,C28,C3,C30,C33,C34,C36,C37,C38,C39,C41,C42,C45,C46,C48,C49,C5,C50,C51,C52,C53,C55,C56,C57,C58,C59,C61,C62,C63,C64,C65,C66,C69,C73,C74,C75,C76,C78,C79,C8,C80,C81,C82,C83,C84,C85,C87,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr3	2610698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B114
lof_cds	Chr3	2610700	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	14	A18,A5,B104,B3,B44,B54,B57,B62,B7,B88,C34,C47,C53,C86
typical_cds_rare	Chr3	2610706	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	B102,B13,D7
typical_cds_rare	Chr3	2610732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	A2,B93,C53
typical_cds_rare	Chr3	2610771	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B113,B17,B27,C50,C63
lof_cds	Chr3	2610784	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	49	A11,A6,A8,B1,B109,B11,B114,B12,B126,B13,B131,B14,B2,B21,B22,B25,B29,B32,B42,B43,B44,B5,B6,B61,B63,B64,B66,B76,B79,B83,B84,B85,B86,B91,C2,C20,C21,C28,C32,C35,C39,C40,C49,C54,C57,C68,C76,C84,C87
lof_cds	Chr3	2610788	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	14	A8,B102,B107,B122,B35,B82,C32,C50,C65,C68,C77,C9,D11,D3
lof_cds	Chr3	2610799	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	18	A14,B105,B114,B120,B128,B139,B21,B28,B4,B79,B85,B95,C40,C59,C71,C74,C82,D7
lof_cds	Chr3	2610800	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	152	A10,A13,A14,A15,A16,A19,A2,A20,A22,A4,A7,A8,A9,B1,B10,B100,B101,B103,B105,B106,B107,B108,B111,B112,B113,B114,B115,B121,B122,B124,B126,B127,B128,B129,B134,B137,B138,B139,B14,B140,B16,B17,B18,B19,B20,B21,B22,B23,B24,B25,B26,B27,B31,B35,B36,B37,B4,B40,B41,B45,B46,B48,B50,B54,B57,B59,B60,B61,B63,B68,B69,B7,B70,B71,B74,B77,B80,B81,B83,B85,B86,B87,B89,B9,B91,B92,B93,B94,B95,B97,B99,C1,C10,C11,C12,C13,C14,C15,C17,C21,C22,C25,C26,C28,C3,C30,C34,C35,C37,C38,C39,C4,C41,C42,C45,C46,C48,C5,C50,C51,C52,C53,C55,C58,C59,C62,C63,C64,C65,C69,C7,C70,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C85,C9,D2,D3,D4,D5,D6,D8,D9
lof_cds	Chr3	2610806	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	6	B103,B104,B119,B135,B23,C48
lof_cds	Chr3	2610809	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	A6,B42,B43,B5
typical_cds_rare	Chr3	2610809	A	ACT	INDEL	2bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	A6,B42,B43,B5
typical_cds_rare	Chr3	2610810	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	A6,B42,B43,B5
lof_cds	Chr3	2610815	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	11	B13,B132,B52,B53,B75,B93,C33,C47,C55,C8,D1
typical_cds_rare	Chr3	2610837	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B89
lof_cds	Chr3	2610854	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	C36,C81
typical_cds_rare	Chr3	2610854	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	C36,C81
lof_cds	Chr3	2610863	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B27,C50
typical_cds_rare	Chr3	2610863	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B27,C50
lof_cds	Chr3	2610884	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B132,B89
typical_cds_rare	Chr3	2610884	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B132,B89
typical_cds_rare	Chr3	2610890	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	C65
lof_cds	Chr3	2610894	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B68
typical_cds_rare	Chr3	2610894	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B68
lof_cds	Chr3	2610895	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	40	A16,A2,A20,A21,A22,B1,B103,B106,B117,B118,B120,B124,B125,B127,B138,B14,B140,B21,B22,B24,B28,B37,B46,B49,B68,B74,B79,B8,B87,B90,B92,C14,C27,C35,C4,C45,C60,C7,C72,D5
typical_cds_rare	Chr3	2610917	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B41,B54,B77,B9,C74
typical_cds_rare	Chr3	2610934	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B75
typical_cds_rare	Chr3	2610942	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B128,C64
typical_cds_rare	Chr3	2610943	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	A2,B128,B93,D2
lof_cds	Chr3	2610947	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B135,B23,C48,C51,C69
typical_cds_rare	Chr3	2610947	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B135,B23,C48,C51,C69
typical_cds_rare	Chr3	2610954	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	A5,B75,B96
typical_cds_rare	Chr3	2610963	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	B131,B28,C62
lof_cds	Chr3	2610970	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	6	B101,B115,B126,B49,B91,D5
lof_cds	Chr3	2610989	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	84	A10,A13,A15,A16,A19,A25,A3,A4,A6,A7,B1,B110,B112,B119,B121,B123,B127,B129,B13,B130,B131,B136,B14,B140,B15,B2,B22,B26,B28,B29,B32,B33,B40,B43,B44,B5,B50,B53,B59,B61,B64,B69,B73,B77,B8,B80,B83,B84,B88,B9,B91,B93,C1,C16,C17,C2,C20,C23,C24,C27,C29,C3,C30,C34,C40,C42,C45,C46,C49,C5,C52,C53,C54,C59,C63,C67,C75,C80,C86,C87,D1,D10,D11,D4
typical_cds_rare	Chr3	2610996	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	B127,B129,D3
typical_cds_rare	Chr3	2611000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B114,B25,C41,C58,C84
typical_cds_rare	Chr3	2611003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	B110,B79,C63,D10
lof_cds	Chr3	2611008	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B101,B79,B94,C81,D9
typical_cds_rare	Chr3	2611008	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B101,B79,B94,C81,D9
lof_cds	Chr3	2611011	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B101,B79,B94,C81,D9
typical_cds_rare	Chr3	2611011	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	5	B101,B79,B94,C81,D9
lof_cds	Chr3	2611022	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B115,B89
typical_cds_rare	Chr3	2611022	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B115,B89
typical_cds_rare	Chr3	2611059	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B139,B25
lof_cds	Chr3	2611075	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B110
typical_cds_rare	Chr3	2611075	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	B110
typical_cds_rare	Chr3	2611085	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	2	B74,C62
lof_cds	Chr3	2611087	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	121	A10,A11,A13,A14,A16,A19,A20,A22,A4,A7,A8,A9,B10,B100,B101,B103,B105,B108,B11,B114,B115,B119,B126,B127,B13,B133,B134,B135,B138,B140,B16,B18,B19,B20,B23,B25,B26,B30,B32,B35,B37,B39,B4,B40,B41,B42,B45,B46,B48,B5,B56,B57,B59,B61,B64,B68,B70,B71,B72,B74,B81,B85,B86,B87,B89,B91,B93,B94,B95,B96,B98,C1,C10,C12,C13,C14,C15,C21,C24,C25,C26,C27,C28,C33,C35,C38,C39,C4,C41,C45,C46,C49,C50,C52,C53,C55,C58,C59,C60,C61,C63,C64,C65,C71,C74,C77,C78,C8,C80,C82,C84,C85,C9,D1,D11,D2,D3,D4,D5,D6,D9
typical_cds_rare	Chr3	2611094	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	C70
typical_cds_rare	Chr3	2611116	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	1	C65
typical_cds_rare	Chr3	2611123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	B22,B49,C48,D5
lof_cds	Chr3	2611126	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	9	B113,B131,B140,B21,B69,B73,B78,C73,D5
lof_cds	Chr3	2611129	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	8	B113,B131,B140,B21,B69,B78,C73,D5
lof_cds	Chr3	2611133	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	24	A13,A14,A19,A4,B105,B106,B112,B120,B137,B139,B17,B36,B61,B83,B88,B97,C13,C41,C59,C7,C72,C82,D2,D3
lof_cds	Chr3	2611139	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	98	A11,A13,A14,A18,A20,A4,A7,A8,A9,B10,B100,B101,B102,B103,B105,B106,B108,B109,B114,B115,B119,B12,B122,B123,B126,B134,B135,B138,B139,B140,B16,B19,B20,B22,B25,B26,B34,B39,B40,B42,B43,B45,B46,B48,B5,B57,B59,B61,B64,B70,B72,B74,B81,B86,B89,B91,B93,B94,B95,B96,B98,C1,C12,C13,C15,C16,C24,C25,C33,C35,C37,C41,C46,C49,C52,C53,C55,C56,C58,C59,C63,C64,C65,C78,C79,C8,C80,C81,C82,C83,C84,C85,D11,D2,D4,D6,D7,D9
lof_cds	Chr3	2611143	T	TA	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	109	A11,A13,A14,A15,A16,A18,A20,A8,A9,B10,B100,B101,B102,B103,B108,B109,B11,B114,B115,B119,B12,B122,B123,B125,B126,B127,B133,B134,B135,B138,B16,B18,B19,B20,B22,B23,B25,B26,B34,B37,B39,B4,B42,B43,B45,B46,B48,B5,B57,B61,B64,B70,B71,B72,B74,B81,B85,B86,B89,B91,B94,B95,B96,B98,C1,C10,C12,C13,C14,C15,C16,C24,C25,C26,C27,C3,C33,C35,C37,C39,C4,C45,C49,C50,C52,C55,C56,C58,C59,C61,C63,C64,C65,C66,C71,C74,C77,C79,C8,C80,C81,C83,C84,C85,C9,D4,D6,D7,D9
typical_cds_rare	Chr3	2611175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	3	B27,C50,C67
lof_cds	Chr3	2611186	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	A20,A7,B10,C33
typical_cds_rare	Chr3	2611186	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131015775	SmilChr03G000223	131015775	rna-XM_057944200.1	4	A20,A7,B10,C33