source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	3052654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B10,B4
typical_cds_rare	Chr3	3052666	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B54,B9,C22,C26
typical_cds_rare	Chr3	3052681	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B4
typical_cds_rare	Chr3	3052682	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B4
typical_cds_rare	Chr3	3052686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B4
typical_cds_rare	Chr3	3052693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C40
typical_cds_rare	Chr3	3052701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
lof_cds	Chr3	3052714	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052714	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052716	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	A6,B134
lof_cds	Chr3	3052717	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052717	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
lof_cds	Chr3	3052724	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052724	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
lof_cds	Chr3	3052727	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052727	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C18,C36
typical_cds_rare	Chr3	3052737	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	A6,C18,C36
typical_cds_rare	Chr3	3052753	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C1
typical_cds_rare	Chr3	3052784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B102,B47,C14
typical_cds_rare	Chr3	3052869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	A11,B117,C53,C63,C8
typical_cds_rare	Chr3	3052874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B107,C31
typical_cds_rare	Chr3	3052878	TAC	*	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	A21,B107,B59,C31
lof_cds	Chr3	3052886	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C15
typical_cds_rare	Chr3	3052886	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C15
typical_cds_rare	Chr3	3052891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B50
typical_cds_rare	Chr3	3052926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B59,B66,C42
lof_cds	Chr3	3052949	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	67	A22,A23,B10,B100,B102,B104,B105,B118,B121,B123,B126,B127,B128,B131,B140,B15,B16,B20,B22,B23,B24,B26,B32,B34,B37,B4,B5,B53,B63,B64,B71,B74,B83,B85,B93,B96,B99,C10,C13,C18,C26,C30,C32,C33,C39,C4,C40,C41,C45,C47,C48,C5,C50,C54,C55,C59,C6,C63,C67,C68,C69,C77,C78,C80,C82,C83,C84
lof_cds	Chr3	3052954	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	45	A11,A18,A2,A20,A24,A6,B105,B114,B117,B120,B122,B132,B22,B29,B3,B33,B39,B40,B48,B52,B54,B55,B56,B63,B69,B79,B89,B9,B96,C12,C16,C26,C31,C37,C45,C53,C57,C63,C68,C7,C70,C72,C8,D10,D5
typical_cds_rare	Chr3	3052959	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C37
typical_cds_rare	Chr3	3052961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	A5
typical_cds_rare	Chr3	3052976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B93,C10
lof_cds	Chr3	3053001	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	6	B32,B78,C30,C32,C45,C68
typical_cds_rare	Chr3	3053018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	A8
lof_cds	Chr3	3053022	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	21	A10,A11,A14,A25,A3,A5,B105,B11,B130,B27,B38,B50,B73,B79,B8,B9,C11,C29,C53,C7,D2
lof_cds	Chr3	3053023	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	25	A5,B1,B106,B128,B139,B140,B6,B62,B63,B65,B83,B91,B93,B98,C1,C14,C15,C18,C28,C55,C56,C68,C87,D2,D8
lof_cds	Chr3	3053024	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	106	A13,A22,A23,A4,A8,A9,B1,B10,B100,B102,B104,B105,B110,B113,B118,B12,B121,B123,B126,B127,B128,B131,B132,B133,B136,B137,B140,B15,B16,B17,B20,B21,B22,B23,B24,B25,B28,B32,B34,B37,B4,B42,B46,B48,B5,B53,B63,B64,B68,B71,B74,B76,B78,B80,B83,B85,B86,B87,B93,B96,B98,B99,C1,C10,C13,C14,C18,C19,C24,C25,C27,C30,C32,C33,C39,C4,C40,C41,C42,C43,C45,C46,C47,C48,C5,C50,C51,C55,C56,C57,C59,C60,C63,C64,C67,C68,C69,C77,C78,C80,C82,C83,C84,C85,D3,D8
lof_cds	Chr3	3053087	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B105,B70
typical_cds_rare	Chr3	3053087	A	ATG	INDEL	2bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B105,B70
typical_cds_rare	Chr3	3053102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B5,C1,C54
typical_cds_rare	Chr3	3053110	GA	*	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B46,B60,B93,C10,C48
typical_cds_rare	Chr3	3053166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	D2
typical_cds_rare	Chr3	3053167	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	D2
lof_cds	Chr3	3053169	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	6	A10,B127,B129,B9,C17,C29
lof_cds	Chr3	3053172	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	6	A10,B127,B129,B9,C17,C29
typical_cds_rare	Chr3	3053206	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B86
lof_cds	Chr3	3053263	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B122,B44,B68,C56,D4
typical_cds_rare	Chr3	3053263	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B122,B44,B68,C56,D4
typical_cds_rare	Chr3	3053273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B24
typical_cds_rare	Chr3	3053283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B54,B9,C22,C26
typical_cds_rare	Chr3	3053289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B45,B52
typical_cds_rare	Chr3	3053364	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	A16,B67,C45,C46,D4
typical_cds_rare	Chr3	3053370	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B110
lof_cds	Chr3	3053397	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B38,B80
typical_cds_rare	Chr3	3053397	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B38,B80
typical_cds_rare	Chr3	3053398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B2,B38,B80,C20
typical_cds_rare	Chr3	3053414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B17,B38,B80
typical_cds_rare	Chr3	3053426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	C44,D11
lof_cds	Chr3	3053447	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B109,B13,B132,B80,C81
typical_cds_rare	Chr3	3053447	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B109,B13,B132,B80,C81
lof_cds	Chr3	3053464	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	14	B135,B29,B45,B61,B64,B7,B9,C21,C69,C76,C78,C85,D10,D4
lof_cds	Chr3	3053474	A	ATT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	A18,B1,C43
typical_cds_rare	Chr3	3053474	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	A18,B1,C43
typical_cds_rare	Chr3	3053488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B39,C31,D1
typical_cds_rare	Chr3	3053497	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B104,B71,B81,C15,C37
lof_cds	Chr3	3053533	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	7	B10,B121,B65,B71,C31,C6,C72
typical_cds_rare	Chr3	3053582	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B136,B64,C65
lof_cds	Chr3	3053600	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	8	A18,A5,B1,B28,B68,C27,C43,C64
lof_cds	Chr3	3053605	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	79	A14,A16,A2,A21,A24,B1,B101,B106,B107,B11,B111,B113,B121,B123,B126,B13,B131,B138,B14,B16,B17,B18,B2,B22,B26,B27,B28,B32,B33,B35,B44,B46,B47,B48,B55,B64,B65,B66,B68,B7,B76,B77,B78,B8,B9,B96,B99,C1,C16,C17,C2,C20,C21,C24,C27,C29,C30,C31,C32,C33,C39,C44,C45,C47,C49,C5,C53,C56,C58,C62,C68,C75,C80,C82,D10,D4,D5,D6,D7
lof_cds	Chr3	3053608	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	71	A14,A16,A2,A21,A24,B101,B106,B107,B11,B111,B113,B121,B123,B126,B13,B131,B138,B14,B16,B17,B18,B2,B22,B26,B28,B32,B33,B35,B44,B46,B47,B48,B55,B64,B66,B68,B76,B77,B78,B8,B9,B96,C1,C16,C17,C2,C20,C24,C27,C29,C30,C32,C33,C39,C44,C45,C47,C49,C5,C53,C56,C62,C68,C75,C80,C82,D10,D4,D5,D6,D7
lof_cds	Chr3	3053609	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	26	A18,A5,A6,A9,B1,B111,B122,B125,B130,B135,B24,B25,B28,B39,B49,B50,B54,B55,B68,B99,C14,C27,C43,C58,C64,C83
typical_cds_rare	Chr3	3053628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B33
lof_cds	Chr3	3053644	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	56	A1,A16,A18,A19,A5,A6,A9,B1,B111,B120,B121,B122,B125,B130,B135,B21,B24,B25,B27,B28,B39,B49,B50,B51,B54,B55,B58,B59,B65,B66,B68,B7,B71,B73,B75,B86,B99,C12,C13,C14,C21,C27,C31,C37,C4,C43,C55,C58,C6,C64,C70,C72,C73,C83,D11,D3
lof_cds	Chr3	3053648	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	57	A1,A16,A18,A19,A5,A6,A9,B1,B111,B120,B121,B122,B125,B130,B135,B21,B24,B25,B27,B28,B39,B49,B50,B51,B54,B55,B58,B59,B65,B66,B68,B7,B71,B73,B75,B86,B99,C12,C13,C14,C21,C27,C31,C37,C4,C43,C5,C55,C58,C6,C64,C70,C72,C73,C83,D11,D3
lof_cds	Chr3	3053653	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	46	A10,A13,A14,A8,B13,B132,B15,B2,B21,B31,B34,B38,B39,B41,B47,B51,B57,B6,B62,B72,B75,B76,B80,B86,B88,B94,C1,C13,C19,C21,C22,C26,C34,C35,C36,C37,C38,C44,C56,C66,C67,C68,C81,C83,C87,D6
typical_cds_rare	Chr3	3053662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B111,D2
lof_cds	Chr3	3053673	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B34,B92,C58,C65
typical_cds_rare	Chr3	3053673	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B34,B92,C58,C65
typical_cds_rare	Chr3	3053712	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B9,C22,C26
typical_cds_rare	Chr3	3053720	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B39,B55,C14,C7
typical_cds_rare	Chr3	3053744	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B138,C63
typical_cds_rare	Chr3	3053757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B2,C66
lof_cds	Chr3	3053762	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	51	A1,A16,A5,A9,B1,B104,B107,B121,B122,B125,B128,B131,B135,B25,B27,B28,B39,B54,B55,B58,B59,B6,B65,B66,B7,B71,B73,B75,B99,C12,C14,C21,C27,C29,C31,C37,C4,C43,C5,C58,C6,C62,C64,C7,C70,C72,C73,C79,C83,C9,D3
typical_cds_rare	Chr3	3053781	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C27
typical_cds_rare	Chr3	3053784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B78
typical_cds_rare	Chr3	3053800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B86
typical_cds_rare	Chr3	3053821	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	A4,B78,C55,C56
lof_cds	Chr3	3053827	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	A10,B57,C32,C67
typical_cds_rare	Chr3	3053827	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	A10,B57,C32,C67
typical_cds_rare	Chr3	3053864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	B54,C22,C26
lof_cds	Chr3	3053883	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B66,B73
typical_cds_rare	Chr3	3053883	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B66,B73
typical_cds_rare	Chr3	3053888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	A4,B78,C55,C58
lof_cds	Chr3	3053889	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B66,B73
typical_cds_rare	Chr3	3053889	CCG	C	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B66,B73
typical_cds_rare	Chr3	3053890	CG	*	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B66,B73
typical_cds_rare	Chr3	3053895	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B15,B86
typical_cds_rare	Chr3	3053921	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B114,B73
typical_cds_rare	Chr3	3053987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B122,D3
typical_cds_rare	Chr3	3054005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B54,B9,C22,C26
typical_cds_rare	Chr3	3054016	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B73,C68
typical_cds_rare	Chr3	3054022	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B61,B72,B76,C26,C38
typical_cds_rare	Chr3	3054041	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C80
typical_cds_rare	Chr3	3054043	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	3	C52,C62,C68
typical_cds_rare	Chr3	3054071	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C67
typical_cds_rare	Chr3	3054085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B112,C22
typical_cds_rare	Chr3	3054204	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	A8,C55
lof_cds	Chr3	3054212	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	A8,C55
typical_cds_rare	Chr3	3054212	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	A8,C55
typical_cds_rare	Chr3	3054230	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	A8,C55
typical_cds_rare	Chr3	3054254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	A8,B83,C5,C55
typical_cds_rare	Chr3	3054256	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	5	B105,B107,B128,B23,C82
typical_cds_rare	Chr3	3054259	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B112
lof_cds	Chr3	3054333	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B41,C57
typical_cds_rare	Chr3	3054333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B41,C57
typical_cds_rare	Chr3	3054371	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C82
typical_cds_rare	Chr3	3054446	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B54,B9,C22,C26
typical_cds_rare	Chr3	3054535	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B83
typical_cds_rare	Chr3	3054554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	4	B54,B9,C22,C26
lof_cds	Chr3	3054564	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	25	A3,B111,B129,B134,B5,B50,B53,B61,B66,B72,B97,C13,C21,C24,C25,C27,C29,C3,C30,C34,C40,C47,C51,C56,C63
lof_cds	Chr3	3054575	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	33	A20,A24,B105,B107,B109,B112,B124,B133,B139,B14,B23,B28,B29,B3,B35,B46,B48,B54,B56,B83,B87,B9,B95,B96,C12,C26,C39,C45,C61,C69,D10,D5,D9
typical_cds_rare	Chr3	3054609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B83,C39
typical_cds_rare	Chr3	3054679	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B120
lof_cds	Chr3	3054693	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	27	A10,A2,A24,B11,B118,B129,B130,B131,B21,B45,B5,B62,B70,B75,B77,B80,C13,C16,C28,C41,C42,C43,C64,C72,C85,C86,D5
lof_cds	Chr3	3054699	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B137,B82
typical_cds_rare	Chr3	3054699	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B137,B82
lof_cds	Chr3	3054703	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	27	A11,A4,A5,B11,B111,B13,B28,B33,B35,B5,B50,B53,B66,B72,B81,B85,B95,C18,C27,C29,C30,C34,C47,C5,C52,C56,C65
typical_cds_rare	Chr3	3054704	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C28
typical_cds_rare	Chr3	3054709	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B56,C87
typical_cds_rare	Chr3	3054729	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B120
lof_cds	Chr3	3054732	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B71
typical_cds_rare	Chr3	3054732	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B71
lof_cds	Chr3	3054736	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	8	B13,B32,B78,B92,C29,C85,D1,D4
lof_cds	Chr3	3054740	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	8	B13,B32,B78,B92,C29,C85,D1,D4
typical_cds_rare	Chr3	3054749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C45
typical_cds_rare	Chr3	3054766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	B71
typical_cds_rare	Chr3	3054835	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	2	B23,C87
typical_cds_rare	Chr3	3054894	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	1	C43
lof_cds	Chr3	3054906	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	9	A21,A23,B102,B35,B42,B94,C71,D3,D9
lof_cds	Chr3	3054909	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1,rna-XM_057945554.1	9	A21,A23,B102,B35,B42,B94,C71,D3,D9
lof_cds	Chr3	3054955	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	4	B54,B9,C22,C26
typical_cds_rare	Chr3	3054955	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	4	B54,B9,C22,C26
lof_cds	Chr3	3054983	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	2	B63,C32
typical_cds_rare	Chr3	3054983	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	2	B63,C32
typical_cds_rare	Chr3	3055037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B103,B115,B32
typical_cds_rare	Chr3	3055039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	4	B2,B36,C39,C59
typical_cds_rare	Chr3	3055198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	2	B85,C61
typical_cds_rare	Chr3	3055210	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	4	B114,C16,C20,C74
typical_cds_rare	Chr3	3055215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B103,C16,C31
typical_cds_rare	Chr3	3055222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	2	B104,B136
typical_cds_rare	Chr3	3055232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	4	B35,B93,C1,C69
typical_cds_rare	Chr3	3055255	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
lof_cds	Chr3	3055257	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
typical_cds_rare	Chr3	3055257	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
lof_cds	Chr3	3055261	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
typical_cds_rare	Chr3	3055261	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
typical_cds_rare	Chr3	3055268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
typical_cds_rare	Chr3	3055320	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	3	B105,B29,C37
lof_cds	Chr3	3055343	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	12	A11,A15,B113,B17,B45,B49,B55,C30,C37,C76,D3,D9
typical_cds_rare	Chr3	3055369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016811	SmilChr03G000263	131016811	rna-XM_057945553.1	1	A23