source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	3337086	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B2
typical_cds_rare	Chr3	3337180	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	B31,B65,B72,C20,C6
typical_cds_rare	Chr3	3337221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	C1,C31
typical_cds_rare	Chr3	3337226	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	C1,C31
typical_cds_rare	Chr3	3338942	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	C78
lof_cds	Chr3	3338944	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	10	A5,B114,B3,B44,B54,B57,B62,C47,C53,C84
lof_cds	Chr3	3338945	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	10	A5,B114,B3,B44,B54,B57,B62,C47,C53,C84
lof_cds	Chr3	3338960	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	95	A11,A13,A14,A16,A19,A21,A25,A3,A4,A6,A7,A9,B10,B103,B107,B109,B11,B111,B112,B115,B119,B121,B122,B125,B126,B127,B128,B13,B140,B15,B18,B21,B22,B32,B34,B36,B40,B41,B45,B53,B6,B64,B65,B7,B72,B73,B77,B8,B81,B83,B86,B88,B90,B92,B93,B94,B98,B99,C1,C11,C17,C18,C19,C22,C23,C26,C27,C30,C36,C39,C42,C43,C44,C49,C5,C52,C53,C55,C57,C58,C59,C61,C63,C64,C65,C71,C74,C75,C77,C82,C87,D10,D2,D3,D8
lof_cds	Chr3	3338964	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	17	A9,B10,B119,B125,B13,B32,B41,B45,B64,B81,B94,B98,C55,C57,C74,C87,D8
typical_cds_rare	Chr3	3338983	ATG	*	INDEL	2bp_deletion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	3	A16,B103,B109
lof_cds	Chr3	3338988	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B94,D8
typical_cds_rare	Chr3	3338988	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B94,D8
typical_cds_rare	Chr3	3339013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A9,B10,B64,C36,C55
typical_cds_rare	Chr3	3339015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A9,B10,B64,C36,C55
typical_cds_rare	Chr3	3339040	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	3	A9,B5,B57
typical_cds_rare	Chr3	3339079	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B5,B57
typical_cds_rare	Chr3	3339198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	A4,B133
typical_cds_rare	Chr3	3339236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A4,B127,B133,B5,B86
typical_cds_rare	Chr3	3339253	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	B131,B53,B65,C31,D3
typical_cds_rare	Chr3	3339275	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B122,C67
lof_cds	Chr3	3339294	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	6	B103,B124,B79,C28,C41,C74
typical_cds_rare	Chr3	3339328	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	3	B1,B108,B31
typical_cds_rare	Chr3	3339333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	4	C17,C66,C75,C76
lof_cds	Chr3	3339366	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	B108,B17,B31,B73,C68
typical_cds_rare	Chr3	3339366	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	B108,B17,B31,B73,C68
typical_cds_rare	Chr3	3339376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B122
typical_cds_rare	Chr3	3339406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B78,D6
lof_cds	Chr3	3339434	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	6	A13,B64,B98,C24,C36,C56
typical_cds_rare	Chr3	3339471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	4	B3,B86,C55,C80
typical_cds_rare	Chr3	3339475	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	C39,C63
typical_cds_rare	Chr3	3339488	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	3	B65,C20,C6
typical_cds_rare	Chr3	3339508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	3	A20,C24,C78
typical_cds_rare	Chr3	3339521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B1
typical_cds_rare	Chr3	3339571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B112
typical_cds_rare	Chr3	3339580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	C87
lof_cds	Chr3	3339588	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B112
typical_cds_rare	Chr3	3339588	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B112
lof_cds	Chr3	3339592	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B112
typical_cds_rare	Chr3	3339592	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B112
typical_cds_rare	Chr3	3339606	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	A20,C24
typical_cds_rare	Chr3	3339627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	A13,B72
typical_cds_rare	Chr3	3339630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B65
typical_cds_rare	Chr3	3339643	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	A13,B72
typical_cds_rare	Chr3	3339644	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B65
typical_cds_rare	Chr3	3339674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B65
typical_cds_rare	Chr3	3339688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	A13,B72
lof_cds	Chr3	3339697	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B15
typical_cds_rare	Chr3	3339697	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B15
typical_cds_rare	Chr3	3339892	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B24
typical_cds_rare	Chr3	3339896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B24
typical_cds_rare	Chr3	3339942	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	C64,C66
lof_cds	Chr3	3339960	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	20	A10,A13,A18,A8,B106,B125,B30,B31,B48,B61,B72,B86,B90,B92,C26,C35,C36,C42,C58,D10
lof_cds	Chr3	3339979	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	12	A2,A20,B106,B117,B118,B120,B124,B129,B139,B87,C7,C72
typical_cds_rare	Chr3	3339988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B24
typical_cds_rare	Chr3	3340008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A9,B131,C18,C2,C24
typical_cds_rare	Chr3	3340056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B2
typical_cds_rare	Chr3	3340065	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	C9
typical_cds_rare	Chr3	3340078	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	4	B10,B78,B94,C9
lof_cds	Chr3	3340080	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	C19
typical_cds_rare	Chr3	3340080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	C19
typical_cds_rare	Chr3	3340102	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B10,B94
lof_cds	Chr3	3340116	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	18	A10,A13,A18,A8,A9,B106,B131,B48,B61,B72,B86,B90,B92,C18,C2,C35,C36,C42
typical_cds_rare	Chr3	3340199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	B99,C10,C15,C23,C55
lof_cds	Chr3	3340218	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B131
typical_cds_rare	Chr3	3340218	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B131
typical_cds_rare	Chr3	3340277	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	4	A20,A6,C78,C85
typical_cds_rare	Chr3	3340365	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B124,B138
typical_cds_rare	Chr3	3340398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	B52,C15,C39,C8,D9
typical_cds_rare	Chr3	3340451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	D11
lof_cds	Chr3	3340465	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A13,B15,B34,B36,C59
typical_cds_rare	Chr3	3340465	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A13,B15,B34,B36,C59
typical_cds_rare	Chr3	3340594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	5	A2,A8,B105,B28,C74
lof_cds	Chr3	3340723	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	7	B118,B52,C10,C23,C55,C60,D1
lof_cds	Chr3	3340837	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B118
typical_cds_rare	Chr3	3340837	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B118
lof_cds	Chr3	3340844	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B118
typical_cds_rare	Chr3	3340844	T	TAC	INDEL	2bp_insertion	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	B118
typical_cds_rare	Chr3	3340932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	1	C29
typical_cds_rare	Chr3	3340939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	3	B121,B134,B99
typical_cds_rare	Chr3	3340949	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	2	B121,B99
lof_cds	Chr3	3340952	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018098	SmilChr03G000292	131018098	rna-XM_057946821.1	9	B49,B7,B82,B97,C61,C77,C8,C9,D7