source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	3409304	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	19	B108,B122,B137,B17,B65,B72,B73,B80,B85,C19,C20,C21,C23,C28,C32,C36,C6,C68,C81
lof_cds	Chr3	3409305	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	46	B109,B11,B111,B132,B134,B27,B37,B45,B47,B5,B59,B69,B70,B75,B77,B90,B92,C14,C15,C17,C2,C27,C29,C33,C37,C38,C41,C45,C46,C50,C56,C63,C64,C66,C69,C71,C75,C76,C79,C8,C82,D1,D3,D5,D6,D7
lof_cds	Chr3	3409308	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	65	B108,B109,B11,B111,B122,B132,B134,B137,B17,B27,B37,B45,B47,B5,B59,B65,B69,B70,B72,B73,B77,B80,B85,B90,B92,C14,C15,C17,C19,C2,C20,C21,C23,C27,C28,C29,C32,C33,C36,C37,C38,C41,C45,C46,C50,C56,C6,C63,C64,C66,C68,C69,C71,C75,C76,C79,C8,C81,C82,D1,D11,D3,D5,D6,D7
lof_cds	Chr3	3409315	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	13	A5,B104,B3,B54,B57,B62,B7,B88,C34,C47,C5,C53,C86
lof_cds	Chr3	3409316	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	61	B108,B109,B111,B122,B132,B134,B137,B17,B27,B37,B45,B47,B5,B59,B65,B69,B70,B72,B73,B77,B80,B85,C14,C15,C17,C19,C2,C20,C21,C23,C27,C28,C29,C32,C33,C36,C37,C38,C41,C45,C46,C50,C56,C6,C63,C64,C66,C68,C69,C71,C75,C76,C79,C8,C81,C82,D1,D11,D3,D5,D7
typical_cds_rare	Chr3	3409335	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B10,B45,B75,C25
typical_cds_rare	Chr3	3409340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	A23,B113,B127,B37,C51
typical_cds_rare	Chr3	3409348	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B108,C23
typical_cds_rare	Chr3	3409350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	A9,C18,C46
typical_cds_rare	Chr3	3409358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	D10
typical_cds_rare	Chr3	3409366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	B2,C64,D10
lof_cds	Chr3	3409398	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C46
typical_cds_rare	Chr3	3409398	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C46
typical_cds_rare	Chr3	3409399	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	A21,B119,B132,B138,B98
typical_cds_rare	Chr3	3409402	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	B64
typical_cds_rare	Chr3	3409427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B17,B65,B72,B85
lof_cds	Chr3	3409430	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C28,C32
typical_cds_rare	Chr3	3409430	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C28,C32
typical_cds_rare	Chr3	3409456	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B115,C67
typical_cds_rare	Chr3	3409487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C31,C67
typical_cds_rare	Chr3	3409490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C30,C75
typical_cds_rare	Chr3	3409498	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	A10,C38
typical_cds_rare	Chr3	3409511	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B103,C74
lof_cds	Chr3	3409514	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	A15,C81
typical_cds_rare	Chr3	3409514	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	A15,C81
typical_cds_rare	Chr3	3409519	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	A20,B117,B64,C27,C49
typical_cds_rare	Chr3	3409520	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	B75
typical_cds_rare	Chr3	3409523	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	A8
lof_cds	Chr3	3409525	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	6	A19,A23,B130,C63,C66,C74
lof_cds	Chr3	3409534	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	6	A19,A23,B130,C63,C66,C74
lof_cds	Chr3	3409538	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	7	A10,B10,B71,B75,B86,C63,C76
lof_cds	Chr3	3409542	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	B10,B71,C76
typical_cds_rare	Chr3	3409542	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	B10,B71,C76
typical_cds_rare	Chr3	3409543	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	B75
typical_cds_rare	Chr3	3409546	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C63
typical_cds_rare	Chr3	3409555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	A5,B56
typical_cds_rare	Chr3	3409609	ACG	*	INDEL	2bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B11,B37,B49,C77
typical_cds_rare	Chr3	3409635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B43,C71
typical_cds_rare	Chr3	3409640	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	B26
typical_cds_rare	Chr3	3409648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	A8,B61,B72
lof_cds	Chr3	3409681	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B105,B94
typical_cds_rare	Chr3	3409681	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B105,B94
typical_cds_rare	Chr3	3409736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B119,C26,C33,C9
typical_cds_rare	Chr3	3409865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	B82
typical_cds_rare	Chr3	3409867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	A11
typical_cds_rare	Chr3	3409869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C13,C69
typical_cds_rare	Chr3	3409880	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C45
typical_cds_rare	Chr3	3409912	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C45
typical_cds_rare	Chr3	3409961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	B5,C47,C57,C61,C9
typical_cds_rare	Chr3	3409993	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B135,C35,C74,D10
typical_cds_rare	Chr3	3410009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B124,B129,B69,C38
lof_cds	Chr3	3410074	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B118,C65,C85,D7
typical_cds_rare	Chr3	3410074	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B118,C65,C85,D7
lof_cds	Chr3	3410076	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B118,C65,C85,D7
typical_cds_rare	Chr3	3410076	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B118,C65,C85,D7
lof_cds	Chr3	3410135	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B119,B22,B91,C22
typical_cds_rare	Chr3	3410135	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B119,B22,B91,C22
lof_cds	Chr3	3410137	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B119,B22,B91,C22
typical_cds_rare	Chr3	3410137	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	B119,B22,B91,C22
typical_cds_rare	Chr3	3410149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	B127,B83,C8
typical_cds_rare	Chr3	3410174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	B62,B75,B96,B98,C69
typical_cds_rare	Chr3	3410186	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	4	A11,A9,B103,C55
typical_cds_rare	Chr3	3410192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	B35
typical_cds_rare	Chr3	3410247	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	B140,B15,D10
typical_cds_rare	Chr3	3410307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	A9,B103,B134,B90,C55
typical_cds_rare	Chr3	3410338	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B11,B8
lof_cds	Chr3	3410351	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
typical_cds_rare	Chr3	3410351	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
lof_cds	Chr3	3410355	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
typical_cds_rare	Chr3	3410355	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
typical_cds_rare	Chr3	3410390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
typical_cds_rare	Chr3	3410464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
typical_cds_rare	Chr3	3410467	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C65
typical_cds_rare	Chr3	3410486	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C58,C68
lof_cds	Chr3	3410576	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B83,C87
typical_cds_rare	Chr3	3410576	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	B83,C87
typical_cds_rare	Chr3	3410606	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	5	B123,B126,B133,B56,D6
typical_cds_rare	Chr3	3410618	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	3	C14,C50,C62
lof_cds	Chr3	3410679	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C14
typical_cds_rare	Chr3	3410679	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	1	C14
typical_cds_rare	Chr3	3410716	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018102	SmilChr03G000298	131018102	rna-XM_057946825.1	2	C50,C62