source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	3486040	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	1	C31
typical_cds_rare	Chr3	3486040	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	1	C31
lof_cds	Chr3	3486041	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	99	A1,A14,A19,A20,A22,A23,A24,A25,A4,A6,B101,B104,B107,B109,B11,B110,B111,B113,B115,B117,B118,B120,B121,B124,B127,B128,B130,B132,B138,B140,B20,B21,B22,B24,B26,B27,B29,B30,B42,B48,B49,B52,B58,B62,B63,B65,B7,B71,B72,B76,B8,B83,B85,B87,B89,B95,C10,C13,C17,C18,C2,C22,C23,C24,C25,C26,C27,C3,C30,C33,C34,C35,C39,C41,C42,C45,C46,C47,C5,C51,C55,C57,C59,C6,C60,C63,C69,C7,C70,C74,C76,C78,C8,C81,C85,C87,D2,D3,D5
lof_cds	Chr3	3486071	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	17	B106,B137,B16,B57,B69,B97,B98,C15,C23,C38,C40,C56,C77,C79,C82,D2,D8
lof_cds	Chr3	3486087	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	5	B103,B28,B32,C45,C73
typical_cds_rare	Chr3	3486087	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	5	B103,B28,B32,C45,C73
typical_cds_rare	Chr3	3486101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	5	A16,B21,B87,C35,C80
lof_cds	Chr3	3486600	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	1	A3
typical_cds_rare	Chr3	3486600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	1	A3
typical_cds_rare	Chr3	3486638	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945589.1	5	B119,B64,C54,C85,D1
typical_cds_rare	Chr3	3497329	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	4	A22,B101,B140,C27
typical_cds_rare	Chr3	3497331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	2	B6,C16
typical_cds_rare	Chr3	3497659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	5	C33,C87,D11,D3,D7
typical_cds_rare	Chr3	3497668	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	2	C11,C69
typical_cds_rare	Chr3	3497672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	4	A21,B115,B49,B68
typical_cds_rare	Chr3	3497675	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	1	B101
typical_cds_rare	Chr3	3497680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	3	B125,B90,B92
typical_cds_rare	Chr3	3497720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	1	B71
typical_cds_rare	Chr3	3497765	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	4	B122,B13,B39,C14
typical_cds_rare	Chr3	3498126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1	2	B120,B31
typical_cds_rare	Chr3	3498475	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B85
typical_cds_rare	Chr3	3498879	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	D2
typical_cds_rare	Chr3	3498880	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	3	A20,C7,C72
typical_cds_rare	Chr3	3498953	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	3	A1,C32,C82
lof_cds	Chr3	3498955	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B107,B122
typical_cds_rare	Chr3	3498955	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B107,B122
lof_cds	Chr3	3499001	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B38
typical_cds_rare	Chr3	3499001	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B38
typical_cds_rare	Chr3	3499052	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B11
typical_cds_rare	Chr3	3499056	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	D10
typical_cds_rare	Chr3	3499082	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	C11,C51
typical_cds_rare	Chr3	3499088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	4	A1,A14,B58,B7
typical_cds_rare	Chr3	3499157	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B108,C23
typical_cds_rare	Chr3	3499171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B107,B65
typical_cds_rare	Chr3	3499194	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B108,C23
typical_cds_rare	Chr3	3499233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B121,B20
typical_cds_rare	Chr3	3499310	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	5	A20,C24,C29,C78,C85
lof_cds	Chr3	3499450	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	4	B11,B127,B129,B37
typical_cds_rare	Chr3	3499450	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	4	B11,B127,B129,B37
typical_cds_rare	Chr3	3499479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B137
typical_cds_rare	Chr3	3499481	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B87,C62
typical_cds_rare	Chr3	3499489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B42,B43
lof_cds	Chr3	3499494	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B115
typical_cds_rare	Chr3	3499494	T	TCG	INDEL	2bp_insertion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B115
typical_cds_rare	Chr3	3499521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B102
typical_cds_rare	Chr3	3499601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	5	A22,B1,B101,B140,C27
typical_cds_rare	Chr3	3499747	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	3	C32,C33,D3
typical_cds_rare	Chr3	3500293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	4	A1,B19,B55,C50
lof_cds	Chr3	3500354	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B78
typical_cds_rare	Chr3	3500354	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B78
typical_cds_rare	Chr3	3500364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B2
typical_cds_rare	Chr3	3500390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	C85
typical_cds_rare	Chr3	3500666	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	3	B110,B125,C76
typical_cds_rare	Chr3	3500670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	3	B139,B45,B52
lof_cds	Chr3	3500722	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	13	A13,A19,B102,B18,B7,B85,C22,C37,C59,C63,C64,C66,C74
lof_cds	Chr3	3500751	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	8	B137,B28,B48,B56,B79,B86,C23,D5
typical_cds_rare	Chr3	3500956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	3	B129,C63,C67
typical_cds_rare	Chr3	3500972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B31
typical_cds_rare	Chr3	3500989	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	C58,D10
typical_cds_rare	Chr3	3501004	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	2	B5,C46
typical_cds_rare	Chr3	3501064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B35
typical_cds_rare	Chr3	3501080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016828	SmilChr03G000306	131016828	rna-XM_057945588.1,rna-XM_057945589.1	1	B102