source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	3494257	CAG	*	INDEL	2bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945834.1	5	B121,B138,B43,B82,C18
lof_cds	Chr3	3494269	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945834.1	69	A14,A15,A2,A21,A23,A24,A5,A9,B1,B104,B107,B109,B11,B111,B113,B115,B119,B12,B122,B124,B125,B126,B136,B24,B32,B37,B40,B41,B5,B50,B57,B60,B61,B64,B65,B68,B76,B80,B91,C11,C14,C16,C17,C2,C20,C21,C27,C28,C29,C30,C33,C36,C4,C41,C44,C46,C48,C49,C5,C54,C58,C59,C6,C60,C69,C73,C75,C76,C87
lof_cds	Chr3	3494270	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945834.1	51	A14,A15,A21,A23,A9,B1,B107,B109,B11,B111,B113,B119,B122,B124,B125,B126,B136,B24,B37,B40,B5,B50,B57,B58,B60,B64,B65,B80,C11,C14,C16,C17,C20,C21,C27,C28,C29,C30,C33,C36,C48,C49,C5,C54,C59,C6,C60,C69,C75,C76,C81
typical_cds_rare	Chr3	3494275	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945834.1	1	B10
lof_cds	Chr3	3495320	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	142	A1,A11,A13,A14,A15,A2,A20,A23,A4,A6,A8,A9,B10,B100,B101,B102,B104,B106,B107,B108,B109,B110,B111,B113,B115,B118,B119,B12,B120,B121,B122,B124,B125,B126,B127,B128,B129,B131,B133,B134,B137,B139,B16,B18,B19,B2,B20,B21,B22,B25,B29,B30,B31,B35,B36,B38,B39,B4,B40,B42,B43,B44,B45,B46,B48,B49,B54,B55,B61,B65,B67,B68,B70,B71,B72,B75,B76,B77,B82,B83,B85,B86,B88,B89,B90,B91,B92,B93,B94,B99,C1,C14,C15,C16,C2,C22,C24,C26,C31,C32,C33,C35,C36,C37,C38,C41,C42,C43,C44,C48,C49,C50,C53,C59,C62,C63,C64,C66,C7,C71,C72,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C9,D1,D10,D3,D4,D5,D8,D9
typical_cds_rare	Chr3	3495333	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	5	B34,B38,C1,C13,D6
lof_cds	Chr3	3495348	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	8	A1,B134,B137,B19,B70,C43,C50,C82
lof_cds	Chr3	3495353	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	C48
typical_cds_rare	Chr3	3495353	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	C48
lof_cds	Chr3	3495355	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	B49
typical_cds_rare	Chr3	3495355	CCG	C	INDEL	2bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	B49
lof_cds	Chr3	3495359	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	B49
typical_cds_rare	Chr3	3495359	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	B49
typical_cds_rare	Chr3	3495367	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	1	A21
typical_cds_rare	Chr3	3495369	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	3	A14,B19,D4
typical_cds_rare	Chr3	3495380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	3	B16,B4,B76
lof_cds	Chr3	3495404	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	3	B46,C63,C66
typical_cds_rare	Chr3	3495404	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	3	B46,C63,C66
lof_cds	Chr3	3495410	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	2	B55,C80
typical_cds_rare	Chr3	3495410	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	2	B55,C80
lof_cds	Chr3	3495432	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	5	A14,C30,C53,C82,D4
typical_cds_rare	Chr3	3495432	TTA	T	INDEL	2bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	5	A14,C30,C53,C82,D4
lof_cds	Chr3	3495444	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	39	A22,A25,A4,A5,A7,A9,B110,B120,B131,B136,B138,B14,B140,B28,B37,B50,B59,B73,B8,B80,B9,B99,C18,C2,C21,C28,C29,C3,C32,C33,C34,C41,C42,C45,C46,C60,C68,C78,D3
lof_cds	Chr3	3495454	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	4	A3,B114,B94,C41
typical_cds_rare	Chr3	3495454	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	4	A3,B114,B94,C41
lof_cds	Chr3	3495465	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	27	A6,A8,B100,B106,B108,B127,B16,B2,B24,B28,B3,B30,B56,B61,B71,B72,B79,B86,B97,B99,C15,C25,C28,C35,C37,C87,D6
lof_cds	Chr3	3495472	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1	10	B10,B110,B125,B26,B4,B45,B55,C39,C87,D10
typical_cds_rare	Chr3	3495806	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	5	A2,B40,B93,C53,D11
lof_cds	Chr3	3495815	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	7	B14,B50,B59,B8,B80,C34,C60
lof_cds	Chr3	3495854	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	2	C64,C66
typical_cds_rare	Chr3	3495854	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	2	C64,C66
lof_cds	Chr3	3495901	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	24	A19,B111,B113,B17,B27,B49,B69,B7,B74,B82,B97,C11,C14,C32,C50,C51,C61,C63,C67,C68,C69,C82,C9,D11
typical_cds_rare	Chr3	3495930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	1	C73
lof_cds	Chr3	3495939	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	2	B73,D10
typical_cds_rare	Chr3	3495939	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	2	B73,D10
lof_cds	Chr3	3495960	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	8	B12,B20,B42,B43,B68,B94,C48,C85
lof_cds	Chr3	3495962	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	7	B20,B42,B43,B68,B94,C48,C85
typical_cds_rare	Chr3	3495978	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016978	SmilChr03G000307	131016978	rna-XM_057945833.1,rna-XM_057945834.1,rna-XM_057945835.1	2	B118,B24