source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	3517693	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	C11,C18,C69
typical_cds_rare	Chr3	3517693	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	C11,C18,C69
typical_cds_rare	Chr3	3517793	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B104
typical_cds_rare	Chr3	3518051	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B38
typical_cds_rare	Chr3	3518117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B10,B56,B94
typical_cds_rare	Chr3	3518170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B10,B94
typical_cds_rare	Chr3	3518171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B56,C37
typical_cds_rare	Chr3	3518225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	C29
typical_cds_rare	Chr3	3519046	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B59,B63,C25
lof_cds	Chr3	3519053	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	9	B22,B63,C27,C33,C58,C64,C70,C87,D5
typical_cds_rare	Chr3	3519066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	D7
typical_cds_rare	Chr3	3519070	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	A20,B104,B53,C67
typical_cds_rare	Chr3	3519085	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B59,B63,C25,C87
typical_cds_rare	Chr3	3519089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	A10
typical_cds_rare	Chr3	3519109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	A7,B140
typical_cds_rare	Chr3	3519128	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	C66
lof_cds	Chr3	3519133	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B75
typical_cds_rare	Chr3	3519133	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B75
typical_cds_rare	Chr3	3519137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B94,D3
typical_cds_rare	Chr3	3519138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	A21,B13,B24,B81,B94
typical_cds_rare	Chr3	3519139	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	A21,B13,B24,B81,B94
typical_cds_rare	Chr3	3519156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	C39,C52
typical_cds_rare	Chr3	3519161	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B119,C4
typical_cds_rare	Chr3	3519165	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	C39
lof_cds	Chr3	3519175	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B22,C87
typical_cds_rare	Chr3	3519175	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B22,C87
typical_cds_rare	Chr3	3519216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B102,B12,B4,D7
typical_cds_rare	Chr3	3519244	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B41,C10,C74
typical_cds_rare	Chr3	3519250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	A4,B112,B2,B61,C50
typical_cds_rare	Chr3	3519264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B45,B63
typical_cds_rare	Chr3	3519286	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	A10,B22,C27,C87
typical_cds_rare	Chr3	3519318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	A10,B22,C27
typical_cds_rare	Chr3	3519331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	C87
typical_cds_rare	Chr3	3519381	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	B7,B82,B85,C77,C9
typical_cds_rare	Chr3	3519436	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B122,B30
lof_cds	Chr3	3519443	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	C29
typical_cds_rare	Chr3	3519443	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	C29
lof_cds	Chr3	3519456	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B22
typical_cds_rare	Chr3	3519456	G	GAT	INDEL	2bp_insertion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B22
typical_cds_rare	Chr3	3519471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B83
lof_cds	Chr3	3519505	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	19	A1,A5,A8,B105,B114,B118,B134,B137,B65,B66,B67,B68,C18,C36,C43,C50,C77,C87,C9
typical_cds_rare	Chr3	3519517	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	A9,B105,B134,C36,C43
typical_cds_rare	Chr3	3519534	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B102,B4,C29,D7
lof_cds	Chr3	3519535	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B46
typical_cds_rare	Chr3	3519535	G	GGC	INDEL	2bp_insertion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	1	B46
typical_cds_rare	Chr3	3519576	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B4,D7
typical_cds_rare	Chr3	3519713	AT	*	INDEL	1bp_deletion	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	B133,B136,B21,B91,C35
lof_cds	Chr3	3519718	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	16	A14,B11,B126,B127,B24,B37,B54,B55,B86,C12,C19,C25,C29,C33,D4,D5
typical_cds_rare	Chr3	3519758	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B113,B45,B99,C2
typical_cds_rare	Chr3	3519770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B132,C69
lof_cds	Chr3	3519778	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	7	B22,B23,B51,C15,C30,C39,C52
lof_cds	Chr3	3519781	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	8	A2,B134,B2,B70,C15,C32,C68,D9
lof_cds	Chr3	3519783	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	15	A2,B133,B134,B16,B19,B2,B31,B70,C32,C33,C49,C54,C68,D3,D9
lof_cds	Chr3	3519795	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B7,B99,C63,C66
typical_cds_rare	Chr3	3519795	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B7,B99,C63,C66
typical_cds_rare	Chr3	3519869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B55,C33,D3
typical_cds_rare	Chr3	3519912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	B35,B49,C61,C77,C9
lof_cds	Chr3	3519950	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	B31,B65,B72,C20,C6
typical_cds_rare	Chr3	3519950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	5	B31,B65,B72,C20,C6
lof_cds	Chr3	3519956	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	8	B119,B136,B39,B64,C54,C62,C64,C68
typical_cds_rare	Chr3	3519958	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	4	B52,C10,C23,C71
typical_cds_rare	Chr3	3519962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	C14,C7
typical_cds_rare	Chr3	3519988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B31,B65,B72
typical_cds_rare	Chr3	3520013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	2	B120,B94
typical_cds_rare	Chr3	3520022	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	C52,C66,C78
lof_cds	Chr3	3520105	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	39	A10,A25,A3,A4,A7,B110,B111,B121,B130,B136,B140,B15,B33,B38,B39,B40,B50,B52,B53,B59,B73,B77,B8,B80,B9,B93,B99,C10,C17,C23,C29,C30,C42,C46,C5,C53,C71,C75,C76
typical_cds_rare	Chr3	3520219	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B62,C21,C73
lof_cds	Chr3	3520222	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	6	B119,B125,B19,B32,C12,D4
lof_cds	Chr3	3520239	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	25	A13,A16,B102,B109,B119,B136,B18,B22,B24,B36,B6,B61,B83,B91,C15,C2,C24,C39,C40,C49,C5,C54,C79,C85,D7
lof_cds	Chr3	3520241	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	32	A10,A25,A3,A4,A7,B110,B121,B130,B136,B140,B15,B33,B38,B39,B40,B50,B53,B59,B73,B77,B8,B80,B9,B93,B99,C14,C29,C42,C46,C53,C6,C7
lof_cds	Chr3	3520249	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	16	A11,A16,A19,A2,B114,B129,B139,B20,B62,B63,B69,B90,C41,C57,C84,D5
lof_cds	Chr3	3520303	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	10	A9,B16,B34,B52,B70,C10,C32,C55,C79,D9
lof_cds	Chr3	3520312	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	11	A9,B16,B34,B52,B70,C10,C21,C32,C55,C79,D9
typical_cds_rare	Chr3	3520349	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	3	B52,C10,C55
lof_cds	Chr3	3520355	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018109	SmilChr03G000308	131018109	rna-XM_057946831.1	13	A20,A4,B107,B22,B87,B91,C11,C16,C30,C39,C42,C49,C67