source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	3859462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B106,B120,C33,C7,D3
typical_cds_rare	Chr3	3859494	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	C52,C8
lof_cds	Chr3	3859527	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B108,C36,C81,C87
typical_cds_rare	Chr3	3859527	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B108,C36,C81,C87
lof_cds	Chr3	3859538	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	A10,D5
typical_cds_rare	Chr3	3859538	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	A10,D5
lof_cds	Chr3	3859567	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	27	A19,A20,A4,A7,B112,B119,B120,B136,B22,B32,B61,B63,B64,B83,B88,C22,C24,C39,C40,C57,C59,C72,C74,C78,C79,C85,D7
typical_cds_rare	Chr3	3859573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	B78,D9
typical_cds_rare	Chr3	3859581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B104
typical_cds_rare	Chr3	3859587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	C51,D2
lof_cds	Chr3	3859591	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	A14,C12,C33,C71
typical_cds_rare	Chr3	3859591	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	A14,C12,C33,C71
typical_cds_rare	Chr3	3859617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	B1,C28
typical_cds_rare	Chr3	3859644	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A15,B16,B18,B4,C39
typical_cds_rare	Chr3	3859665	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B75
typical_cds_rare	Chr3	3859734	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B22,B90,B92
lof_cds	Chr3	3859868	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	9	B128,B25,B29,B52,B63,B84,B95,C79,C87
typical_cds_rare	Chr3	3859881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A14,C12,C33,C71,D4
typical_cds_rare	Chr3	3859886	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B48,B7,C9,D1
lof_cds	Chr3	3859900	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B28,B30,C41
typical_cds_rare	Chr3	3859900	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B28,B30,C41
lof_cds	Chr3	3859941	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	D10
typical_cds_rare	Chr3	3859941	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	D10
typical_cds_rare	Chr3	3860159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B46
typical_cds_rare	Chr3	3860175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	C41
typical_cds_rare	Chr3	3860179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A21,A5,B125,B35,B55
lof_cds	Chr3	3860234	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A9,B138,B20,B42,B98
typical_cds_rare	Chr3	3860234	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A9,B138,B20,B42,B98
lof_cds	Chr3	3860251	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	29	A13,B11,B111,B125,B134,B135,B136,B26,B3,B38,B40,B43,B60,B61,B66,B69,B70,B71,B73,C1,C10,C18,C31,C40,C51,C53,C73,D4,D9
lof_cds	Chr3	3860255	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	30	A13,B11,B111,B125,B134,B135,B136,B26,B3,B38,B40,B43,B60,B61,B66,B69,B70,B71,B73,C1,C10,C18,C21,C31,C40,C51,C53,C73,D4,D9
typical_cds_rare	Chr3	3860316	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B123,B57,C16,C46,D4
typical_cds_rare	Chr3	3860379	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B9
typical_cds_rare	Chr3	3860385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	B30,C24
lof_cds	Chr3	3860433	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	C14
typical_cds_rare	Chr3	3860433	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	C14
lof_cds	Chr3	3860442	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	73	A13,A16,A20,A21,A3,A5,A8,A9,B100,B11,B121,B129,B131,B132,B135,B139,B18,B19,B2,B26,B28,B3,B34,B38,B39,B40,B41,B44,B49,B5,B61,B62,B64,B66,B67,B69,B7,B71,B82,B87,B88,B91,B92,B94,B95,B96,B97,C1,C10,C11,C17,C20,C21,C23,C27,C31,C38,C4,C40,C45,C46,C50,C52,C63,C66,C74,C78,C80,C84,D11,D4,D5,D9
typical_cds_rare	Chr3	3860451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B122,C23,C29,C71
typical_cds_rare	Chr3	3860474	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	A20,C24
typical_cds_rare	Chr3	3860496	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B115,B89,B92,C28
typical_cds_rare	Chr3	3860497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B76,C55,C67,C81
typical_cds_rare	Chr3	3860504	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	A16,B125,B40,B92
typical_cds_rare	Chr3	3860514	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	B17,C13,C52,C82
typical_cds_rare	Chr3	3860518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B105
lof_cds	Chr3	3860605	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A16,B11,B134,B7,C45
typical_cds_rare	Chr3	3860605	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A16,B11,B134,B7,C45
lof_cds	Chr3	3860608	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A16,B11,B134,B7,C45
typical_cds_rare	Chr3	3860608	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A16,B11,B134,B7,C45
typical_cds_rare	Chr3	3860620	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B16,B96,C28
typical_cds_rare	Chr3	3860823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A25,B11,B40,B7,D7
typical_cds_rare	Chr3	3860841	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A25,B11,B40,B7,D7
typical_cds_rare	Chr3	3860852	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	A25,B11,B7,D7
typical_cds_rare	Chr3	3862075	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	C33
lof_cds	Chr3	3862093	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B101,B15,B27,B85,C15
typical_cds_rare	Chr3	3862093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B101,B15,B27,B85,C15
lof_cds	Chr3	3862102	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B101,B15,B27,B85,C15
typical_cds_rare	Chr3	3862102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B101,B15,B27,B85,C15
typical_cds_rare	Chr3	3866242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B52
lof_cds	Chr3	3866299	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B134
typical_cds_rare	Chr3	3866299	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B134
lof_cds	Chr3	3866302	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B134
typical_cds_rare	Chr3	3866302	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B134
typical_cds_rare	Chr3	3866386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	B122,B56,B67,B83,C30
typical_cds_rare	Chr3	3866400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B129
typical_cds_rare	Chr3	3866554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	C36,C74,C85
typical_cds_rare	Chr3	3866556	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B113
typical_cds_rare	Chr3	3866612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B76
lof_cds	Chr3	3866627	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	7	A15,B46,B55,B70,C21,C81,C82
typical_cds_rare	Chr3	3866631	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	B102,B13
lof_cds	Chr3	3866640	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	13	A20,B119,B136,B32,B61,B83,B91,C22,C24,C72,C74,C78,C79
lof_cds	Chr3	3866654	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	8	A10,A16,B18,B40,B44,B46,B47,C53
typical_cds_rare	Chr3	3866676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B131
typical_cds_rare	Chr3	3866694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A2,B135,B2,C60,D2
typical_cds_rare	Chr3	3866718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	C15,C52
typical_cds_rare	Chr3	3866742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	C65
lof_cds	Chr3	3866794	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	6	A18,B17,B33,B50,B78,D11
lof_cds	Chr3	3866796	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	26	A2,B10,B106,B132,B134,B19,B2,B27,B51,B62,B69,B79,B81,B82,B87,B93,C38,C50,C58,C60,C65,C68,C69,C79,C82,D9
lof_cds	Chr3	3866799	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	23	A15,A4,B128,B18,B31,B35,B4,B42,B6,B66,B72,B86,B88,B94,C22,C26,C35,C61,C74,C77,C81,C85,C9
typical_cds_rare	Chr3	3866816	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B89,C38,C58
typical_cds_rare	Chr3	3866835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	B101,C86
lof_cds	Chr3	3866836	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B109,B80,C81
typical_cds_rare	Chr3	3866836	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	3	B109,B80,C81
typical_cds_rare	Chr3	3866842	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	4	A19,B69,B95,D6
typical_cds_rare	Chr3	3866860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	5	A6,B122,B55,C14,C7
typical_cds_rare	Chr3	3866879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	2	B132,C22
typical_cds_rare	Chr3	3866885	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018119	SmilChr03G000340	131018119	rna-XM_057946841.1	1	B94