source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	4451048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	C24,C8,D2
typical_cds_rare	Chr3	4451054	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	C24,C8,D2
typical_cds_rare	Chr3	4451108	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C6
lof_cds	Chr3	4451114	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B104
typical_cds_rare	Chr3	4451114	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B104
lof_cds	Chr3	4451163	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C8
typical_cds_rare	Chr3	4451163	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C8
lof_cds	Chr3	4451220	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	B136,B64,C24
typical_cds_rare	Chr3	4451220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	B136,B64,C24
lof_cds	Chr3	4451251	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B67
typical_cds_rare	Chr3	4451251	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B67
typical_cds_rare	Chr3	4451283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A20,C78
lof_cds	Chr3	4451294	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	10	B104,B107,B131,B16,B28,B76,C37,C62,C64,C79
typical_cds_rare	Chr3	4451310	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B13
lof_cds	Chr3	4451316	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B72,B9
typical_cds_rare	Chr3	4451316	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B72,B9
lof_cds	Chr3	4451331	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	27	A24,A9,B100,B110,B130,B134,B15,B20,B38,B49,B55,B70,B75,B77,B94,C13,C15,C19,C29,C38,C46,C56,C65,C67,C79,D6,D7
lof_cds	Chr3	4451353	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	4	A5,B57,C5,C53
typical_cds_rare	Chr3	4451353	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	4	A5,B57,C5,C53
lof_cds	Chr3	4451392	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A8,C12
typical_cds_rare	Chr3	4451392	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A8,C12
lof_cds	Chr3	4451435	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	B17,B50,D11
typical_cds_rare	Chr3	4451435	C	CCG	INDEL	2bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	B17,B50,D11
typical_cds_rare	Chr3	4451470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B94
typical_cds_rare	Chr3	4451472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B131
typical_cds_rare	Chr3	4451498	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C15
typical_cds_rare	Chr3	4451517	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	A9,B107,C18
typical_cds_rare	Chr3	4451571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	A14,B8,C33
lof_cds	Chr3	4451584	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	A9,B107,B65,C18,C2
typical_cds_rare	Chr3	4451584	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	A9,B107,B65,C18,C2
lof_cds	Chr3	4451598	A	AAT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	B107,B65,C18,C2,C69
typical_cds_rare	Chr3	4451598	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	B107,B65,C18,C2,C69
lof_cds	Chr3	4451627	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C59
typical_cds_rare	Chr3	4451627	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C59
lof_cds	Chr3	4451640	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	6	A4,B133,B135,B140,C38,C48
typical_cds_rare	Chr3	4451696	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A8,B135
typical_cds_rare	Chr3	4451790	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B49,B94
typical_cds_rare	Chr3	4451994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C41
typical_cds_rare	Chr3	4451996	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A20,C12
typical_cds_rare	Chr3	4452005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C12
typical_cds_rare	Chr3	4452029	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C12
typical_cds_rare	Chr3	4452038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B10
typical_cds_rare	Chr3	4452049	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	B125,B43,B53,C25,C3
typical_cds_rare	Chr3	4452050	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	4	B107,B110,B122,B67
typical_cds_rare	Chr3	4452073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	B107,B110,B122,B67,C46
lof_cds	Chr3	4452079	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	22	A13,B114,B135,B140,B36,B48,B69,B76,B78,B94,C1,C19,C34,C37,C41,C48,C61,C63,C66,C67,C81,C83
typical_cds_rare	Chr3	4452086	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	4	A24,A6,C31,D7
lof_cds	Chr3	4452092	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	10	A5,B103,B26,B32,B41,B68,B8,C24,C6,C77
lof_cds	Chr3	4452163	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	18	A8,B11,B119,B120,B135,B139,B2,B27,B34,B42,B5,B6,B64,B79,B97,C12,C26,D2
lof_cds	Chr3	4452167	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	19	A8,B11,B119,B120,B135,B139,B2,B27,B34,B42,B5,B6,B64,B79,B97,C12,C26,C78,D2
typical_cds_rare	Chr3	4452178	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B97,D2
lof_cds	Chr3	4452193	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	6	B107,B110,B122,B67,C4,C46
typical_cds_rare	Chr3	4452195	CAT	*	INDEL	2bp_deletion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	B107,B110,B122,C4,C46
lof_cds	Chr3	4452211	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	12	A5,B103,B128,B41,B53,B65,B68,B95,C24,C6,C77,C87
lof_cds	Chr3	4452216	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	6	B54,B86,C12,C19,C87,D4
lof_cds	Chr3	4452220	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	C31,C87
typical_cds_rare	Chr3	4452220	A	AGT	INDEL	2bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	C31,C87
typical_cds_rare	Chr3	4452231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B138
lof_cds	Chr3	4452257	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C72
typical_cds_rare	Chr3	4452257	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C72
typical_cds_rare	Chr3	4452321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B57
typical_cds_rare	Chr3	4452362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B75
typical_cds_rare	Chr3	4452427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	C6
typical_cds_rare	Chr3	4452463	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B104
typical_cds_rare	Chr3	4452570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	B138,B65,C77
typical_cds_rare	Chr3	4452582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B54,D4
typical_cds_rare	Chr3	4452717	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	A8,B135,B2,C12,C65
typical_cds_rare	Chr3	4452722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	A8,B135,B2,C12,C65
lof_cds	Chr3	4452736	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	12	A9,B100,B123,B137,B16,B45,B74,C28,C31,C40,C64,C66
lof_cds	Chr3	4452762	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A9,C45
typical_cds_rare	Chr3	4452762	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	A9,C45
lof_cds	Chr3	4452764	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	25	A15,A8,B104,B114,B135,B17,B2,B20,B27,B3,B30,B91,B97,C12,C2,C24,C39,C56,C59,C74,C78,C85,C86,D11,D2
typical_cds_rare	Chr3	4452807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B109
typical_cds_rare	Chr3	4452850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B89,D6
typical_cds_rare	Chr3	4452867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B89,D6
typical_cds_rare	Chr3	4452875	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	5	B109,B27,B57,B80,C63
typical_cds_rare	Chr3	4452876	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B89
typical_cds_rare	Chr3	4452898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	A8,C12,C65
typical_cds_rare	Chr3	4452936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B6,B87
typical_cds_rare	Chr3	4453009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	3	A8,B53,C65
typical_cds_rare	Chr3	4453010	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B3,C24
typical_cds_rare	Chr3	4453022	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	1	B3
typical_cds_rare	Chr3	4453043	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	4	B3,B44,C47,C86
typical_cds_rare	Chr3	4453060	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B139,B30
lof_cds	Chr3	4453074	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	12	A15,B104,B38,B39,B56,B80,B91,B96,C56,C62,C81,D6
typical_cds_rare	Chr3	4453119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018157	SmilChr03G000412	131018157	rna-XM_057946874.1	2	B103,C82