source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	4455083	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	6	B64,B73,B97,C24,C42,C86
typical_cds_rare	Chr3	4455175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	5	B14,B22,B63,B83,D4
lof_cds	Chr3	4455261	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	31	A4,A5,A7,B102,B107,B119,B121,B122,B124,B127,B139,B22,B26,B37,B46,B5,B55,B62,B63,B7,B75,B82,B85,B92,B94,C29,C43,C44,C62,C8,D4
typical_cds_rare	Chr3	4455266	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	B78
typical_cds_rare	Chr3	4455281	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	B78
typical_cds_rare	Chr3	4455329	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	C10
typical_cds_rare	Chr3	4455397	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	5	B112,B52,C10,C23,C55
typical_cds_rare	Chr3	4455417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	3	A9,C62,C71
lof_cds	Chr3	4455533	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	27	A11,A16,A2,B122,B124,B134,B139,B14,B17,B24,B40,B46,B47,B8,B88,B90,B99,C15,C18,C19,C25,C32,C34,C4,C47,C56,C86
lof_cds	Chr3	4455534	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	27	A11,A16,A2,B122,B124,B134,B139,B14,B17,B24,B40,B46,B47,B8,B88,B90,B99,C15,C18,C19,C25,C32,C34,C4,C47,C56,C86
lof_cds	Chr3	4455537	T	TC	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	26	A11,A16,A2,B122,B124,B134,B139,B14,B17,B24,B40,B46,B47,B8,B90,B99,C15,C18,C19,C25,C32,C34,C4,C47,C56,C86
typical_cds_rare	Chr3	4455545	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	2	C64,C66
typical_cds_rare	Chr3	4455589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	3	B56,B98,C11
typical_cds_rare	Chr3	4455591	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	4	B56,B98,C11,D11
typical_cds_rare	Chr3	4455616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	2	B46,D3
typical_cds_rare	Chr3	4455632	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	5	B115,B132,B89,C33,D3
lof_cds	Chr3	4455663	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	13	A16,A18,B130,B14,B3,B35,B42,B47,B57,B73,C64,C71,D2
typical_cds_rare	Chr3	4455671	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	2	A18,B35
lof_cds	Chr3	4455759	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	4	B125,B126,B32,C49
typical_cds_rare	Chr3	4455759	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	4	B125,B126,B32,C49
typical_cds_rare	Chr3	4455820	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	2	B96,C69
typical_cds_rare	Chr3	4455836	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	5	B69,C13,C33,C50,C65
typical_cds_rare	Chr3	4455864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	A5
typical_cds_rare	Chr3	4455972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	5	B112,B52,C10,C23,C55
typical_cds_rare	Chr3	4455980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	3	B47,B9,C45
typical_cds_rare	Chr3	4456011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	4	B22,B5,B57,C46
typical_cds_rare	Chr3	4456101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	D11
typical_cds_rare	Chr3	4456137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	5	A1,B118,C35,C42,C5
lof_cds	Chr3	4456154	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	6	A1,A3,B118,C35,C42,C5
lof_cds	Chr3	4456157	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	6	A1,A3,B118,C35,C42,C5
lof_cds	Chr3	4456175	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	18	A1,A14,A3,B11,B118,B27,B36,B6,B80,C17,C35,C36,C38,C42,C5,C56,C60,C73
typical_cds_rare	Chr3	4456256	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	B85
typical_cds_rare	Chr3	4456261	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	B112
lof_cds	Chr3	4456345	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	B112
typical_cds_rare	Chr3	4456345	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	B112
typical_cds_rare	Chr3	4456369	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	2	C64,C66
typical_cds_rare	Chr3	4456376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	3	B17,B50,B60
typical_cds_rare	Chr3	4457705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	3	C20,C59,C79
typical_cds_rare	Chr3	4457850	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	4	A4,B14,C38,D6
lof_cds	Chr3	4457861	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	A4
typical_cds_rare	Chr3	4457861	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	A4
lof_cds	Chr3	4457863	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	A4
typical_cds_rare	Chr3	4457863	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	A4
typical_cds_rare	Chr3	4457867	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	1	A4
typical_cds_rare	Chr3	4457868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018159	SmilChr03G000414	131018159	rna-XM_057946875.1	3	B18,C38,C72