source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	5007538	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	82	A13,A2,A24,A4,A5,B10,B100,B104,B105,B113,B117,B12,B120,B124,B126,B127,B13,B132,B137,B14,B140,B15,B16,B17,B2,B24,B25,B29,B3,B31,B34,B38,B39,B42,B43,B45,B5,B52,B55,B56,B59,B63,B65,B67,B68,B70,B76,B79,B91,B96,B97,C13,C14,C15,C19,C21,C32,C35,C40,C42,C55,C56,C6,C62,C65,C68,C71,C73,C74,C75,C82,C86,C9,D1,D11,D2,D3,D5,D6,D7,D8,D9
lof_cds	Chr3	5007582	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	49	A15,A2,A22,B102,B105,B118,B12,B122,B125,B13,B131,B132,B136,B139,B14,B21,B28,B3,B4,B41,B42,B43,B46,B47,B52,B56,B62,B71,B94,C12,C13,C23,C37,C4,C45,C46,C53,C56,C59,C61,C62,C64,C65,C70,C72,C75,C82,C86,D3
lof_cds	Chr3	5007672	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	A10,B100,B114
typical_cds_rare	Chr3	5007672	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	A10,B100,B114
typical_cds_rare	Chr3	5007700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	B104
typical_cds_rare	Chr3	5007772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	B111,B60,C30,C8
typical_cds_rare	Chr3	5007798	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	A9,B44,B85,D6
typical_cds_rare	Chr3	5007810	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	B111,B60,C8
typical_cds_rare	Chr3	5007814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	A8,B74,C14
typical_cds_rare	Chr3	5007818	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B133,B93
lof_cds	Chr3	5007822	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	6	B40,B44,B54,B85,B86,D6
typical_cds_rare	Chr3	5007858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	B104
typical_cds_rare	Chr3	5007916	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B31,B75
typical_cds_rare	Chr3	5008059	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	B83,C40,C55
typical_cds_rare	Chr3	5008098	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	B44,B85,D6
typical_cds_rare	Chr3	5008127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	B102,B108,B9,C23
lof_cds	Chr3	5008164	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	6	A13,B104,B73,B91,C21,D6
lof_cds	Chr3	5008168	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	7	A16,A4,B102,B29,C49,D10,D8
typical_cds_rare	Chr3	5008198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	A11,D4
typical_cds_rare	Chr3	5008220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	C21,C66,D3
lof_cds	Chr3	5008228	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	80	A1,A13,A20,A21,A25,A5,B101,B102,B106,B108,B112,B121,B126,B127,B128,B130,B17,B18,B19,B2,B29,B30,B31,B32,B34,B35,B36,B37,B5,B50,B51,B54,B57,B59,B61,B62,B63,B65,B66,B7,B72,B77,B78,B8,B82,B85,B86,B88,B9,B90,B92,B93,B95,B97,B99,C11,C19,C20,C23,C24,C29,C3,C33,C34,C36,C37,C39,C5,C50,C51,C54,C6,C65,C69,C78,C8,C83,C85,C9,D7
typical_cds_rare	Chr3	5008246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	5	B10,B100,B66,C72,D5
typical_cds_rare	Chr3	5008255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	C66,C78,D3
lof_cds	Chr3	5008263	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	5	A13,B38,B73,C21,D6
typical_cds_rare	Chr3	5008263	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	5	A13,B38,B73,C21,D6
lof_cds	Chr3	5008301	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	B10,B78,C72
typical_cds_rare	Chr3	5008301	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	B10,B78,C72
typical_cds_rare	Chr3	5008315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	A11,D4
lof_cds	Chr3	5008331	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B123,B19
typical_cds_rare	Chr3	5008331	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B123,B19
typical_cds_rare	Chr3	5008387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B104,B118
typical_cds_rare	Chr3	5008392	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B130,B69
typical_cds_rare	Chr3	5009807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	B31
lof_cds	Chr3	5009911	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	A4,B133,B69,C38
typical_cds_rare	Chr3	5009911	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	A4,B133,B69,C38
typical_cds_rare	Chr3	5009930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	B30
typical_cds_rare	Chr3	5009941	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	B98,C41,C60,C84
lof_cds	Chr3	5009943	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	B98,C41,C60,C84
typical_cds_rare	Chr3	5009943	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	B98,C41,C60,C84
typical_cds_rare	Chr3	5009953	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B131,B89
typical_cds_rare	Chr3	5009969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	4	B121,B32,B50,C29
typical_cds_rare	Chr3	5009970	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	A21
lof_cds	Chr3	5009995	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B23,C39
typical_cds_rare	Chr3	5009995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B23,C39
typical_cds_rare	Chr3	5010005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	B104
typical_cds_rare	Chr3	5010096	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B140,C13
typical_cds_rare	Chr3	5010097	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	B140,C13
lof_cds	Chr3	5010167	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	5	A14,B60,C27,C52,C73
typical_cds_rare	Chr3	5010167	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	5	A14,B60,C27,C52,C73
typical_cds_rare	Chr3	5010193	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	B31
lof_cds	Chr3	5010225	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	C12
typical_cds_rare	Chr3	5010225	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	1	C12
typical_cds_rare	Chr3	5011909	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	3	B90,B92,C76
typical_cds_rare	Chr3	5013322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018176	SmilChr03G000469	131018176	rna-XM_057946896.1	2	A9,B99