source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	5118171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B36
typical_cds_rare	Chr3	5118208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B65,C57
lof_cds	Chr3	5118213	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	55	A21,A22,A23,A7,B101,B104,B106,B108,B109,B110,B117,B126,B127,B130,B132,B140,B16,B22,B28,B41,B42,B45,B48,B50,B61,B62,B71,B76,B79,B83,B87,B89,C11,C14,C19,C21,C24,C28,C44,C53,C57,C58,C60,C61,C63,C67,C69,C72,C74,C79,C83,D1,D3,D8,D9
lof_cds	Chr3	5118217	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	55	A21,A22,A23,A7,B101,B104,B106,B108,B109,B110,B117,B126,B127,B130,B132,B140,B16,B22,B28,B41,B42,B45,B48,B50,B61,B62,B71,B76,B79,B83,B87,B89,C11,C14,C19,C21,C24,C28,C44,C53,C57,C58,C60,C61,C63,C67,C69,C72,C74,C79,C83,D1,D3,D8,D9
lof_cds	Chr3	5118230	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B128
typical_cds_rare	Chr3	5118230	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B128
lof_cds	Chr3	5118261	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	56	A21,A22,A23,A7,B101,B104,B106,B108,B109,B110,B117,B126,B127,B130,B132,B140,B16,B22,B28,B3,B41,B42,B45,B48,B50,B61,B62,B71,B76,B79,B83,B87,B89,C11,C14,C19,C21,C24,C28,C44,C53,C57,C58,C60,C61,C63,C67,C69,C72,C74,C79,C83,D1,D3,D8,D9
lof_cds	Chr3	5118267	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	56	A21,A22,A23,A7,B101,B104,B106,B108,B109,B110,B117,B126,B127,B130,B132,B140,B16,B22,B28,B3,B41,B42,B45,B48,B50,B61,B62,B71,B76,B79,B83,B87,B89,C11,C14,C19,C21,C24,C28,C44,C53,C57,C58,C60,C61,C63,C67,C69,C72,C74,C79,C83,D1,D3,D8,D9
typical_cds_rare	Chr3	5118319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B118,D7
lof_cds	Chr3	5118384	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	12	A23,B1,B102,B120,B126,B127,B53,C14,C62,C63,C79,C87
typical_cds_rare	Chr3	5118404	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C69
typical_cds_rare	Chr3	5118497	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B111
typical_cds_rare	Chr3	5118686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B119,B126,C20
typical_cds_rare	Chr3	5118694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B119,B126,C20
typical_cds_rare	Chr3	5118711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C65
lof_cds	Chr3	5118731	A	ATC	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C73
typical_cds_rare	Chr3	5118731	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C73
lof_cds	Chr3	5118732	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C73
typical_cds_rare	Chr3	5118732	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C73
lof_cds	Chr3	5118760	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B5,C56
typical_cds_rare	Chr3	5118760	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B5,C56
typical_cds_rare	Chr3	5118786	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B5,C56
lof_cds	Chr3	5118789	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	11	B121,B31,B36,B61,B72,B78,B93,C29,C33,C36,C65
lof_cds	Chr3	5118818	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	A14,B58,B65,C17,D10
typical_cds_rare	Chr3	5118818	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	A14,B58,B65,C17,D10
typical_cds_rare	Chr3	5118829	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B131,B25,C79
lof_cds	Chr3	5118840	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B117,C22
typical_cds_rare	Chr3	5118840	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B117,C22
typical_cds_rare	Chr3	5118846	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	B17,B23,B31,C38,C39
typical_cds_rare	Chr3	5118848	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B13,B52,C72
typical_cds_rare	Chr3	5118885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	A9,B119,B33,B46,C87
typical_cds_rare	Chr3	5118886	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B65
typical_cds_rare	Chr3	5118898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	A9,B73,B76,C12,C49
lof_cds	Chr3	5118909	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	19	A25,B127,B128,B130,B17,B19,B23,B31,B53,B63,B86,B90,B99,C24,C3,C36,C39,C54,D7
typical_cds_rare	Chr3	5118971	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	B21,B72,B90,C3,D4
lof_cds	Chr3	5118982	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	28	A14,A5,B112,B113,B119,B129,B137,B140,B2,B21,B3,B56,B63,B72,B73,B78,B90,C13,C35,C45,C47,C48,C54,C58,C67,C74,D4,D5
typical_cds_rare	Chr3	5119000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	4	B23,B31,B53,B99
lof_cds	Chr3	5119016	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B19
typical_cds_rare	Chr3	5119016	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B19
typical_cds_rare	Chr3	5119042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B128,B17
lof_cds	Chr3	5119159	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B109
typical_cds_rare	Chr3	5119159	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B109
typical_cds_rare	Chr3	5119220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B123,C19,C3
typical_cds_rare	Chr3	5119280	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B45,B60
typical_cds_rare	Chr3	5119291	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B128
typical_cds_rare	Chr3	5119297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C78
typical_cds_rare	Chr3	5119300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C78
typical_cds_rare	Chr3	5119394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B112,B129,C12
typical_cds_rare	Chr3	5119403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	A5
lof_cds	Chr3	5119531	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	C41,C60,C81
typical_cds_rare	Chr3	5119531	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	C41,C60,C81
lof_cds	Chr3	5119618	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	D11
typical_cds_rare	Chr3	5119618	G	GTC	INDEL	2bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	D11
lof_cds	Chr3	5119622	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C65
typical_cds_rare	Chr3	5119622	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C65
typical_cds_rare	Chr3	5119626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	A20,B121,B50,B66,C78
lof_cds	Chr3	5121903	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	23	A14,A19,B114,B120,B123,B138,B17,B19,B25,B41,B53,B88,B98,C27,C4,C41,C47,C57,C60,C73,C77,C81,C84
typical_cds_rare	Chr3	5121971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B127,B85
typical_cds_rare	Chr3	5121982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	B71,C56,C61
lof_cds	Chr3	5122008	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	34	A1,A13,A14,A9,B106,B107,B109,B115,B119,B29,B37,B41,B51,B53,B58,B6,B65,B66,B72,B78,B8,B81,B82,C11,C29,C47,C55,C58,C68,C69,C76,C77,C87,D5
lof_cds	Chr3	5122013	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	34	A1,A13,A14,A9,B106,B107,B109,B115,B119,B29,B37,B41,B51,B53,B58,B6,B65,B66,B72,B78,B8,B81,B82,C11,C29,C47,C55,C58,C68,C69,C76,C77,C87,D5
lof_cds	Chr3	5122067	A	ATT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	C32,C55,D8
typical_cds_rare	Chr3	5122067	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	C32,C55,D8
lof_cds	Chr3	5122100	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	B40,B6,C25,C58,D5
typical_cds_rare	Chr3	5122100	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	B40,B6,C25,C58,D5
typical_cds_rare	Chr3	5122112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	3	A1,C72,C78
typical_cds_rare	Chr3	5122168	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B50
typical_cds_rare	Chr3	5122196	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	B119,B81,B82,C47,C55
lof_cds	Chr3	5122232	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	26	A13,A19,A24,A9,B101,B107,B124,B129,B137,B14,B2,B33,B36,B42,B7,B73,B84,C21,C36,C52,C58,C60,C68,C69,C71,C80
lof_cds	Chr3	5122241	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B111
typical_cds_rare	Chr3	5122241	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B111
lof_cds	Chr3	5122245	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B111
typical_cds_rare	Chr3	5122245	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B111
typical_cds_rare	Chr3	5122276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C71
typical_cds_rare	Chr3	5122295	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	2	B123,B19
lof_cds	Chr3	5122334	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B131
typical_cds_rare	Chr3	5122334	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	B131
typical_cds_rare	Chr3	5122438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	1	C57
typical_cds_rare	Chr3	5122451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018180	SmilChr03G000481	131018180	rna-XM_057946900.1	5	B131,B88,C27,D3,D5