source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	5263584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B11
typical_cds_rare	Chr3	5263599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	5	B109,B131,B6,B89,C25
typical_cds_rare	Chr3	5263635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	4	A24,B60,C62,C74
typical_cds_rare	Chr3	5263668	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	5	B2,B20,B78,C38,C77
typical_cds_rare	Chr3	5263673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B110,B25
typical_cds_rare	Chr3	5263700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B22,B42,B43
typical_cds_rare	Chr3	5263707	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	4	B21,B62,B71,B75
typical_cds_rare	Chr3	5263761	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	4	B21,B22,B42,B43
lof_cds	Chr3	5263812	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	102	A10,A11,A16,A19,A20,A22,A23,A3,A4,A6,A7,A8,A9,B1,B10,B103,B104,B106,B108,B109,B112,B114,B115,B12,B126,B129,B133,B137,B14,B15,B16,B21,B28,B29,B32,B33,B39,B46,B48,B49,B52,B53,B55,B58,B59,B6,B63,B64,B68,B7,B70,B74,B76,B81,B83,B84,B9,C1,C11,C12,C14,C15,C16,C19,C2,C20,C24,C25,C27,C32,C36,C37,C40,C42,C43,C44,C45,C46,C49,C51,C52,C54,C55,C57,C58,C6,C61,C63,C65,C68,C71,C73,C75,C76,C80,C84,C87,D10,D2,D3,D5,D9
lof_cds	Chr3	5263881	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	138	A1,A10,A11,A19,A2,A20,A21,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B1,B10,B104,B105,B106,B108,B109,B110,B112,B113,B114,B120,B121,B123,B126,B128,B129,B132,B133,B135,B14,B15,B16,B20,B21,B24,B28,B29,B3,B30,B31,B32,B33,B35,B36,B39,B40,B41,B47,B51,B52,B53,B56,B58,B59,B6,B60,B61,B62,B64,B68,B69,B7,B71,B72,B75,B76,B79,B8,B80,B81,B83,B84,B85,B86,B89,B9,B93,B94,B96,C1,C10,C11,C12,C14,C15,C16,C17,C18,C19,C2,C20,C24,C25,C28,C29,C30,C31,C34,C36,C41,C42,C43,C44,C45,C48,C49,C51,C52,C55,C57,C58,C6,C61,C62,C63,C66,C67,C7,C71,C76,C80,C84,C85,C87,D10,D2,D3,D4,D5,D9
typical_cds_rare	Chr3	5265757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B54,B86,C85
typical_cds_rare	Chr3	5265825	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	4	B10,B19,B49,C12
typical_cds_rare	Chr3	5265907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	A5,D11
typical_cds_rare	Chr3	5265975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	C85
typical_cds_rare	Chr3	5265980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
lof_cds	Chr3	5265991	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
typical_cds_rare	Chr3	5265991	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
lof_cds	Chr3	5266016	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	32	B102,B109,B112,B114,B127,B128,B18,B19,B25,B36,B37,B5,B6,B63,B77,B82,B95,B97,B98,C12,C25,C3,C39,C4,C41,C54,C59,C60,C81,C83,C84,C9
lof_cds	Chr3	5266019	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
typical_cds_rare	Chr3	5266019	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
lof_cds	Chr3	5266028	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
typical_cds_rare	Chr3	5266028	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
typical_cds_rare	Chr3	5266038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C63,C67
typical_cds_rare	Chr3	5266065	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B109,B6,C25
typical_cds_rare	Chr3	5266071	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	D11
typical_cds_rare	Chr3	5266101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B10
typical_cds_rare	Chr3	5266137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A9,B113,D5
typical_cds_rare	Chr3	5266210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B111,B50,B60
typical_cds_rare	Chr3	5266214	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B49
typical_cds_rare	Chr3	5266328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	C68
lof_cds	Chr3	5266353	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	40	A1,A13,A5,A8,B101,B106,B110,B114,B128,B18,B2,B25,B30,B31,B34,B35,B54,B57,B59,B62,B72,B74,B85,B86,B89,B98,C20,C23,C29,C33,C34,C36,C41,C5,C51,C65,C69,C70,C71,D4
lof_cds	Chr3	5266358	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A5,B23,B73
typical_cds_rare	Chr3	5266358	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A5,B23,B73
typical_cds_rare	Chr3	5266374	ATT	*	INDEL	2bp_deletion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B23
lof_cds	Chr3	5266382	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A9,B113,D5
typical_cds_rare	Chr3	5266382	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A9,B113,D5
typical_cds_rare	Chr3	5266387	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B10,B49
typical_cds_rare	Chr3	5266414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B102
typical_cds_rare	Chr3	5266432	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	5	B102,B41,C10,C56,C74
typical_cds_rare	Chr3	5266460	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B102
typical_cds_rare	Chr3	5266503	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B42,B43,D7
typical_cds_rare	Chr3	5266512	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B23
typical_cds_rare	Chr3	5266568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B54
typical_cds_rare	Chr3	5266570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B126,C20
typical_cds_rare	Chr3	5266620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	5	B21,B22,B65,C19,C6
typical_cds_rare	Chr3	5266711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B101
typical_cds_rare	Chr3	5266730	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	C28,C42
typical_cds_rare	Chr3	5266769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B50,B60
lof_cds	Chr3	5266787	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B21,B65,C19
typical_cds_rare	Chr3	5266787	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B21,B65,C19
typical_cds_rare	Chr3	5266792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B21,B65,C19
typical_cds_rare	Chr3	5266800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A14,B27,B83
typical_cds_rare	Chr3	5266815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B21,B22,C19
typical_cds_rare	Chr3	5266816	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	5	B18,C26,C42,C5,D4
typical_cds_rare	Chr3	5266833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B22,C19
typical_cds_rare	Chr3	5266840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	C42
typical_cds_rare	Chr3	5266875	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	D7
typical_cds_rare	Chr3	5266962	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	C17
typical_cds_rare	Chr3	5266968	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A9,B113,D5
typical_cds_rare	Chr3	5266995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B41,C57
typical_cds_rare	Chr3	5267034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B10,B49
typical_cds_rare	Chr3	5267058	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B93,C53
typical_cds_rare	Chr3	5267061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B120,C47,C57
typical_cds_rare	Chr3	5267098	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B104
typical_cds_rare	Chr3	5267100	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B107,B127,B65
lof_cds	Chr3	5267133	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B110
typical_cds_rare	Chr3	5267133	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B110
typical_cds_rare	Chr3	5267187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	D4
typical_cds_rare	Chr3	5267226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	A5,B23,D11
typical_cds_rare	Chr3	5267234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B131,B89
typical_cds_rare	Chr3	5267303	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B109,B131,C25
typical_cds_rare	Chr3	5267315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	D11
typical_cds_rare	Chr3	5267323	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	5	B126,B65,C19,C20,C60
typical_cds_rare	Chr3	5267356	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B22,B42,B43
typical_cds_rare	Chr3	5267443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B21,B22
typical_cds_rare	Chr3	5267475	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B140
typical_cds_rare	Chr3	5267480	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	3	B49,C52,C6
typical_cds_rare	Chr3	5267495	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B64
typical_cds_rare	Chr3	5267508	AC	*	INDEL	1bp_deletion	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	1	B43
lof_cds	Chr3	5267630	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	6	A15,A6,B21,B75,C62,C81
typical_cds_rare	Chr3	5267642	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	4	B139,C12,C38,C70
lof_cds	Chr3	5267692	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	7	A15,A6,B21,B75,B80,C62,C81
typical_cds_rare	Chr3	5267704	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B22,B43
typical_cds_rare	Chr3	5267830	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B105,C13
typical_cds_rare	Chr3	5267920	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	A5,B23
typical_cds_rare	Chr3	5267942	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017165	SmilChr03G000491	131017165	rna-XM_057945896.1	2	B111,B50