source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	5474543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B65
typical_cds_rare	Chr3	5474565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	C55
lof_cds	Chr3	5474573	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
typical_cds_rare	Chr3	5474573	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
lof_cds	Chr3	5474578	A	AAG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
typical_cds_rare	Chr3	5474578	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
lof_cds	Chr3	5474579	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
typical_cds_rare	Chr3	5474579	T	TAC	INDEL	2bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
typical_cds_rare	Chr3	5474583	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	C55
typical_cds_rare	Chr3	5474592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B45
lof_cds	Chr3	5474593	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	C55
typical_cds_rare	Chr3	5474593	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	C55
lof_cds	Chr3	5474604	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B21
typical_cds_rare	Chr3	5474604	A	AGT	INDEL	2bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B21
typical_cds_rare	Chr3	5474607	GA	*	INDEL	1bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	3	B21,B45,B56
typical_cds_rare	Chr3	5474629	CTA	*	INDEL	2bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	2	B45,C55
lof_cds	Chr3	5475156	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	17	B112,B133,B137,B14,B28,B3,B47,B56,B84,B95,B96,C12,C21,C56,C80,C84,D5
lof_cds	Chr3	5475158	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	17	B112,B133,B137,B14,B28,B3,B47,B56,B84,B95,B96,C12,C21,C56,C80,C84,D5
lof_cds	Chr3	5475493	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B49
typical_cds_rare	Chr3	5475493	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	1	B49
lof_cds	Chr3	5475496	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	3	B118,B49,B9
typical_cds_rare	Chr3	5475496	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	3	B118,B49,B9
typical_cds_rare	Chr3	5475514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	3	B22,B9,C57
lof_cds	Chr3	5475515	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	6	B117,B118,B138,B49,B55,B80
lof_cds	Chr3	5475523	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945909.1	6	B117,B118,B138,B49,B55,B80
lof_cds	Chr3	5475531	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1,rna-XM_057945909.1	3	A15,B8,C34
typical_cds_rare	Chr3	5475531	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1,rna-XM_057945909.1	3	A15,B8,C34
typical_cds_rare	Chr3	5475555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	B9,B99,C73
typical_cds_rare	Chr3	5475560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B120,B13,B45,B50,C57
lof_cds	Chr3	5475592	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	B22,B90,C58
typical_cds_rare	Chr3	5475592	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	B22,B90,C58
typical_cds_rare	Chr3	5475618	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	B62,B99,C73
typical_cds_rare	Chr3	5475629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	B118,B38,B43,C66
typical_cds_rare	Chr3	5475631	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	B118,B137,B43
typical_cds_rare	Chr3	5475632	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	B41,B9,C22,C26
typical_cds_rare	Chr3	5475662	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	B101
lof_cds	Chr3	5475729	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	37	A15,A22,A4,A5,A7,B109,B118,B12,B135,B35,B36,B44,B56,B6,B76,B8,B80,B94,B96,C19,C21,C32,C34,C36,C37,C48,C61,C62,C63,C66,C67,C68,C72,C81,C83,D2,D7
lof_cds	Chr3	5475734	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	6	B122,B131,C18,C32,C50,C72
lof_cds	Chr3	5475735	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B131,C18,C32,C50,C72
typical_cds_rare	Chr3	5475735	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B131,C18,C32,C50,C72
typical_cds_rare	Chr3	5475751	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B137,B36,B95,C40,C59
typical_cds_rare	Chr3	5475757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B117,B64,B69,B9,B90
typical_cds_rare	Chr3	5475780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	C5
typical_cds_rare	Chr3	5475786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	A21,A24,A7,B80
typical_cds_rare	Chr3	5475789	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	B96
typical_cds_rare	Chr3	5475819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	C5
typical_cds_rare	Chr3	5475849	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	C22,C27,C57,C6
typical_cds_rare	Chr3	5476011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	2	B59,C11
typical_cds_rare	Chr3	5476047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	A23,B114,B46,B70,C61
lof_cds	Chr3	5476096	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	D9
typical_cds_rare	Chr3	5476096	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	D9
typical_cds_rare	Chr3	5476117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	A18
typical_cds_rare	Chr3	5476129	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	B74,C14,D9
typical_cds_rare	Chr3	5476154	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	B117,B3,B44,C31
typical_cds_rare	Chr3	5476197	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	C32
typical_cds_rare	Chr3	5476202	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B117,B29,B44,C31,C32
typical_cds_rare	Chr3	5476240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	B117,B29,B44,C31
typical_cds_rare	Chr3	5476241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	A23,A24,B114,B46,C61
typical_cds_rare	Chr3	5476255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	C32
typical_cds_rare	Chr3	5476256	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	A23,A24,B114,B46,C61
typical_cds_rare	Chr3	5476263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	3	A18,B74,C14
typical_cds_rare	Chr3	5476265	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	5	B117,B29,B44,C31,C32
lof_cds	Chr3	5476275	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	A23,A24,B46,C61
typical_cds_rare	Chr3	5476275	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	A23,A24,B46,C61
typical_cds_rare	Chr3	5476283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	4	A23,A24,B46,C61
lof_cds	Chr3	5476364	C	CAT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	A18
typical_cds_rare	Chr3	5476364	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131017176	SmilChr03G000507	131017176	rna-XM_057945908.1	1	A18