source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	5780417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B20,C34
typical_cds_rare	Chr3	5780719	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	A7,B15,B55,C31,C34
typical_cds_rare	Chr3	5780758	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	A1,B117
typical_cds_rare	Chr3	5780771	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	B15,B55,C31,C34
typical_cds_rare	Chr3	5780785	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	B15,B55,C31,C34
typical_cds_rare	Chr3	5826157	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	B117,B28,B89,C10
lof_cds	Chr3	5826275	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B117
typical_cds_rare	Chr3	5826275	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B117
typical_cds_rare	Chr3	5826292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	A7,B5,C55,D2,D5
lof_cds	Chr3	5826316	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B109,B34,C46,C77,C8
typical_cds_rare	Chr3	5826316	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B109,B34,C46,C77,C8
lof_cds	Chr3	5826320	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B109,B34,C46,C77,C8
typical_cds_rare	Chr3	5826320	T	TAC	INDEL	2bp_insertion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B109,B34,C46,C77,C8
lof_cds	Chr3	5826430	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	39	A13,B105,B106,B11,B117,B123,B125,B13,B131,B28,B29,B30,B31,B36,B41,B61,B7,B72,B76,B8,B86,B89,B98,C10,C11,C15,C16,C29,C3,C33,C36,C51,C60,C65,C69,C73,C74,D1,D4
lof_cds	Chr3	5826434	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B71
typical_cds_rare	Chr3	5826434	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B71
typical_cds_rare	Chr3	5826453	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B119,B48,C18
typical_cds_rare	Chr3	5826543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B78
typical_cds_rare	Chr3	5826557	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B78
typical_cds_rare	Chr3	5826599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	A3,B103,B54,C68
typical_cds_rare	Chr3	5826613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B107,B47,C47
typical_cds_rare	Chr3	5826623	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	A18
typical_cds_rare	Chr3	5826674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B128,B34,B72,C18,C35
typical_cds_rare	Chr3	5826781	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B97
typical_cds_rare	Chr3	5826844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B16,B74
typical_cds_rare	Chr3	5826849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	A13,B34,B39,B91,C8
typical_cds_rare	Chr3	5826947	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B1,B93,C80
typical_cds_rare	Chr3	5826950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B17,B26,C6,C78,D11
typical_cds_rare	Chr3	5826960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B68,B78,C1
typical_cds_rare	Chr3	5826969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B78,C1
typical_cds_rare	Chr3	5826993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	C34,C66
typical_cds_rare	Chr3	5827006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B55,B97,C3,C31,C83
typical_cds_rare	Chr3	5827008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B108,C34,C57
lof_cds	Chr3	5827020	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B136,B31,B71,C12,C66
typical_cds_rare	Chr3	5827020	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B136,B31,B71,C12,C66
typical_cds_rare	Chr3	5827026	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	B136,B31,B71,C12
typical_cds_rare	Chr3	5827034	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B100,C80
typical_cds_rare	Chr3	5827095	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B128,C70
typical_cds_rare	Chr3	5827096	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B55
typical_cds_rare	Chr3	5827100	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	A20,B71
typical_cds_rare	Chr3	5827140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	C28,C54
typical_cds_rare	Chr3	5827148	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	C28,C54
lof_cds	Chr3	5827149	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	23	A3,A8,B107,B109,B11,B122,B17,B25,B37,B48,B59,B60,B71,B72,B82,C18,C25,C4,C40,C46,C77,C9,D8
typical_cds_rare	Chr3	5827168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B86,D6
lof_cds	Chr3	5827184	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	A19
typical_cds_rare	Chr3	5827184	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	A19
typical_cds_rare	Chr3	5827191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	C54,C70
typical_cds_rare	Chr3	5827203	CAT	*	INDEL	2bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	A10,B109,B69,C55,C57
typical_cds_rare	Chr3	5827225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	B69,B82
typical_cds_rare	Chr3	5827299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B12,B68,D2
lof_cds	Chr3	5827341	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	11	A8,B122,B25,B37,B59,C25,C4,C46,C8,C9,D8
lof_cds	Chr3	5827352	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	10	A8,B122,B25,B37,B59,C4,C46,C8,C9,D8
typical_cds_rare	Chr3	5827380	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	B122,B28,B73,B8
lof_cds	Chr3	5827425	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	C22,C47
typical_cds_rare	Chr3	5827425	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	C22,C47
lof_cds	Chr3	5827426	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B36,B63,C25,C68,C86
typical_cds_rare	Chr3	5827426	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B36,B63,C25,C68,C86
lof_cds	Chr3	5827437	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	28	A16,A23,B108,B128,B137,B24,B30,B37,B42,B63,B71,B77,B83,C15,C21,C23,C35,C41,C45,C46,C60,C66,C72,C75,C81,C9,D3,D7
typical_cds_rare	Chr3	5827476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	B101
lof_cds	Chr3	5827499	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	A5,B19,B63,C68,C86
typical_cds_rare	Chr3	5827499	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	A5,B19,B63,C68,C86
lof_cds	Chr3	5827512	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	31	A15,A21,B105,B112,B129,B13,B130,B14,B17,B20,B26,B28,B3,B4,B47,B55,B56,B71,B75,B84,B85,B90,B95,B96,C12,C21,C56,C62,C80,C84,D5
typical_cds_rare	Chr3	5827514	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	2	A18,A7
lof_cds	Chr3	5827515	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B71,B75,B90
typical_cds_rare	Chr3	5827515	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B71,B75,B90
lof_cds	Chr3	5827517	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	28	A15,A21,B105,B112,B129,B13,B130,B14,B17,B20,B26,B28,B3,B4,B47,B55,B56,B84,B85,B95,B96,C12,C21,C56,C62,C80,C84,D5
lof_cds	Chr3	5827518	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	28	A15,A21,B105,B112,B129,B13,B130,B14,B17,B20,B26,B28,B3,B4,B47,B55,B56,B84,B85,B95,B96,C12,C21,C56,C62,C80,C84,D5
typical_cds_rare	Chr3	5827569	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B6,B63,C46,C49,C66
lof_cds	Chr3	5827570	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	22	A14,A22,A7,B30,B37,B53,B77,B81,B83,B95,B99,C20,C39,C45,C54,C55,C56,C64,C70,C72,C73,D7
lof_cds	Chr3	5827574	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B6,B63,C46,C49,C66
typical_cds_rare	Chr3	5827574	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B6,B63,C46,C49,C66
lof_cds	Chr3	5827575	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	30	A24,B113,B119,B15,B19,B23,B24,B26,B41,B42,B47,B55,B66,B75,B82,B9,B97,C1,C27,C35,C43,C58,C60,C64,C71,C76,C79,C83,D2,D5
typical_cds_rare	Chr3	5827592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	B53,C47,C77
typical_cds_rare	Chr3	5827649	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	5	B132,B15,B47,C22,C47
typical_cds_rare	Chr3	5827709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	D7
lof_cds	Chr3	5827713	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	A3,C22,C26
typical_cds_rare	Chr3	5827713	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	A3,C22,C26
typical_cds_rare	Chr3	5827716	AG	*	INDEL	1bp_deletion	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	3	A3,C22,C26
lof_cds	Chr3	5827717	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	6	B113,B49,B50,B54,B60,C58
lof_cds	Chr3	5827723	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	6	B113,B49,B50,B54,B60,C58
typical_cds_rare	Chr3	5827731	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	4	B113,B50,B54,B60
typical_cds_rare	Chr3	5827737	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018199	SmilChr03G000536	131018199	rna-XM_057946924.1	1	D7