source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	5851450	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A24,B60,C52,C74
typical_cds_rare	Chr3	5851461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B18,B2
typical_cds_rare	Chr3	5851490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B18,B2,C28
typical_cds_rare	Chr3	5851515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C28
typical_cds_rare	Chr3	5851666	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C13,C28
typical_cds_rare	Chr3	5851699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B12,C87,D2
typical_cds_rare	Chr3	5851705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B12,C87,D2
typical_cds_rare	Chr3	5851714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C31,C83
typical_cds_rare	Chr3	5853661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A22,B135,B139,C27
typical_cds_rare	Chr3	5853688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C52
typical_cds_rare	Chr3	5853714	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B119,B45
lof_cds	Chr3	5853741	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B78,B99
typical_cds_rare	Chr3	5853741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B78,B99
lof_cds	Chr3	5853748	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	32	A10,A21,A22,A4,A6,B101,B111,B115,B14,B140,B64,B66,B76,B94,C10,C17,C19,C21,C24,C26,C31,C35,C42,C5,C61,C63,C64,C67,C7,C75,C76,C83
lof_cds	Chr3	5853755	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	A1,B85
typical_cds_rare	Chr3	5853755	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	A1,B85
typical_cds_rare	Chr3	5853775	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B78
typical_cds_rare	Chr3	5853788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	A22,B78
typical_cds_rare	Chr3	5853791	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C55,C57
typical_cds_rare	Chr3	5853800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	A5,B82,C34
typical_cds_rare	Chr3	5853801	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B93,C53
typical_cds_rare	Chr3	5853804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B99
typical_cds_rare	Chr3	5853806	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	A22,B78,C27
typical_cds_rare	Chr3	5853816	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B100,C60,C64,C66,C80
lof_cds	Chr3	5853818	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	8	A8,B19,B48,B6,C25,C49,C55,C57
typical_cds_rare	Chr3	5853824	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B16,B74,C79
typical_cds_rare	Chr3	5853831	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A22,B78,C27,D4
lof_cds	Chr3	5853854	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A18,B74,C79,D11
typical_cds_rare	Chr3	5853854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A18,B74,C79,D11
typical_cds_rare	Chr3	5853866	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B22,B23,C39
typical_cds_rare	Chr3	5853869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B22,B23,C39
typical_cds_rare	Chr3	5853903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B77
typical_cds_rare	Chr3	5853904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B93,C53
typical_cds_rare	Chr3	5853910	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B99
typical_cds_rare	Chr3	5853927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A18,B64,B90,B92
typical_cds_rare	Chr3	5856648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C71
typical_cds_rare	Chr3	5856654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B11,B34,B63,B69
typical_cds_rare	Chr3	5856661	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B119
typical_cds_rare	Chr3	5856675	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B119,B136,B140,B33,D4
typical_cds_rare	Chr3	5856685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	A14
typical_cds_rare	Chr3	5856690	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B59,B86,D9
typical_cds_rare	Chr3	5856724	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B35
typical_cds_rare	Chr3	5856725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B33
typical_cds_rare	Chr3	5856748	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B134,B48,B94
typical_cds_rare	Chr3	5856751	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C41
typical_cds_rare	Chr3	5856761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B41,B43
typical_cds_rare	Chr3	5856762	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B56,C37,C80
typical_cds_rare	Chr3	5856766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B115,C49,C55
typical_cds_rare	Chr3	5856775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B56,C80,D5
typical_cds_rare	Chr3	5856784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B56,C80,D5
typical_cds_rare	Chr3	5856811	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C80,D2
typical_cds_rare	Chr3	5856832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B104,C82,D2
typical_cds_rare	Chr3	5856966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B105,B33,B4,B87
typical_cds_rare	Chr3	5856968	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B122,B61,C4
lof_cds	Chr3	5857007	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	57	A11,A16,A2,A3,A5,A7,B10,B102,B109,B120,B122,B129,B15,B18,B20,B3,B31,B34,B39,B42,B52,B55,B57,B60,B62,B64,B69,B76,B80,B85,B9,B94,B96,B99,C15,C16,C21,C23,C31,C33,C34,C35,C38,C39,C4,C42,C44,C50,C55,C57,C58,C59,C62,C68,C69,C71,D3
lof_cds	Chr3	5857012	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	54	A11,A16,A2,A3,A5,A7,B10,B102,B109,B120,B122,B129,B15,B18,B20,B3,B31,B34,B39,B42,B52,B55,B57,B60,B62,B76,B80,B85,B9,B94,B96,B99,C15,C16,C21,C23,C31,C33,C34,C35,C39,C4,C42,C44,C50,C55,C57,C58,C59,C62,C68,C69,C71,D3
lof_cds	Chr3	5857031	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	18	A1,A8,B109,B25,B31,B48,B59,B82,C18,C25,C40,C50,C79,C8,C9,D2,D8,D9
typical_cds_rare	Chr3	5857066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B43,D2
typical_cds_rare	Chr3	5857134	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	A7,C56
typical_cds_rare	Chr3	5857153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B69,C38
typical_cds_rare	Chr3	5857920	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B30,B61,B72,C64
typical_cds_rare	Chr3	5857927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C38
typical_cds_rare	Chr3	5857935	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B20
typical_cds_rare	Chr3	5857936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C13,C28
typical_cds_rare	Chr3	5857964	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B129
typical_cds_rare	Chr3	5857984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B76,C34,C63,C67
typical_cds_rare	Chr3	5858008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	D6
typical_cds_rare	Chr3	5858036	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B20,C56,C65,C82
typical_cds_rare	Chr3	5858040	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B139,B63,B83,C73,C9
typical_cds_rare	Chr3	5858051	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B20
typical_cds_rare	Chr3	5858053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B110,B53,C45
typical_cds_rare	Chr3	5858104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	A16,B89,B99
typical_cds_rare	Chr3	5858127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	C16,C51,C56
typical_cds_rare	Chr3	5858154	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B68,C87,D2
typical_cds_rare	Chr3	5858168	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B126,B20,B66,C64,C66
typical_cds_rare	Chr3	5858221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B89
typical_cds_rare	Chr3	5858232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	A22,B48,B78,C31,C37
typical_cds_rare	Chr3	5858240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	A22
typical_cds_rare	Chr3	5858332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C74,C82
typical_cds_rare	Chr3	5858341	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B99
typical_cds_rare	Chr3	5858348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B117,B12,D6
typical_cds_rare	Chr3	5858375	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A10,A23,B136,C51
typical_cds_rare	Chr3	5858459	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B1,B16,B85,C13,C64
typical_cds_rare	Chr3	5858507	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	B59,C50,C8
typical_cds_rare	Chr3	5858522	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B103,C55
typical_cds_rare	Chr3	5858527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B127,B70,C15,D2
typical_cds_rare	Chr3	5858530	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B82
lof_cds	Chr3	5858559	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	24	A23,B1,B119,B136,B15,B2,B30,B41,B61,B66,B84,B9,B91,B94,C16,C18,C28,C4,C46,C64,C66,C74,C8,D10
lof_cds	Chr3	5858563	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	24	A23,B1,B119,B136,B15,B2,B30,B41,B61,B66,B84,B9,B91,B94,C16,C18,C28,C4,C46,C64,C66,C74,C8,D10
typical_cds_rare	Chr3	5858565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B77,B9,C22,C26,C60
typical_cds_rare	Chr3	5858603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B16,B74,B89,C79
typical_cds_rare	Chr3	5858614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	3	A14,C30,D4
typical_cds_rare	Chr3	5858621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A24,B20,B78,C21
typical_cds_rare	Chr3	5858624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B121,B2,B92,C58
typical_cds_rare	Chr3	5858634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	B12,B121,B92,D1
typical_cds_rare	Chr3	5858658	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	B66
lof_cds	Chr3	5858686	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B15,B2,B41,C18,C4
typical_cds_rare	Chr3	5858686	TTA	T	INDEL	2bp_deletion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B15,B2,B41,C18,C4
lof_cds	Chr3	5858690	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B103,B53,B97,C45,C55
typical_cds_rare	Chr3	5858690	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	B103,B53,B97,C45,C55
lof_cds	Chr3	5858693	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	6	B103,B53,B97,C44,C45,C55
typical_cds_rare	Chr3	5858704	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C66
lof_cds	Chr3	5858722	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B60,B65
typical_cds_rare	Chr3	5858722	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B60,B65
lof_cds	Chr3	5858724	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B60,B65
typical_cds_rare	Chr3	5858724	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	B60,B65
typical_cds_rare	Chr3	5858726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	2	C17,C7
typical_cds_rare	Chr3	5858770	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C55
lof_cds	Chr3	5858829	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	29	A13,A18,A3,A7,B1,B101,B110,B131,B134,B137,B140,B36,B40,B55,B70,B8,B80,C13,C23,C25,C36,C53,C56,C57,C73,C78,C87,D10,D8
lof_cds	Chr3	5858834	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	29	A13,A18,A3,A7,B1,B101,B110,B131,B134,B137,B140,B36,B40,B55,B70,B8,B80,C13,C23,C25,C36,C53,C56,C57,C73,C78,C87,D10,D8
lof_cds	Chr3	5858845	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	29	A13,A18,A3,A7,B1,B101,B110,B131,B134,B137,B140,B36,B40,B55,B70,B8,B80,C13,C23,C25,C36,C53,C56,C57,C73,C78,C87,D10,D8
lof_cds	Chr3	5858927	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A24,B109,B68,C52
typical_cds_rare	Chr3	5858927	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A24,B109,B68,C52
typical_cds_rare	Chr3	5858930	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	4	A24,B109,B68,C52
lof_cds	Chr3	5858963	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	31	A16,A24,A7,B1,B101,B102,B109,B110,B134,B137,B140,B40,B48,B55,B68,B70,B8,B80,B85,C13,C23,C25,C36,C57,C72,C73,C74,C78,C87,D10,D8
lof_cds	Chr3	5858977	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	25	A16,A24,A7,B1,B101,B102,B110,B134,B137,B140,B40,B48,B68,B70,B8,B85,C23,C25,C57,C72,C73,C74,C78,D10,D8
lof_cds	Chr3	5858980	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	25	A16,A24,A7,B1,B101,B102,B110,B134,B137,B140,B40,B48,B68,B70,B8,B85,C23,C25,C57,C72,C73,C74,C78,D10,D8
typical_cds_rare	Chr3	5859030	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	1	C31
lof_cds	Chr3	5859031	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	37	A11,A15,A16,A21,B104,B105,B112,B12,B129,B13,B130,B133,B14,B20,B26,B28,B3,B4,B47,B54,B55,B56,B84,B95,B96,C12,C21,C31,C40,C56,C62,C64,C71,C80,C84,D5,D9
lof_cds	Chr3	5859033	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	A24,B102,B110,B134,B40
typical_cds_rare	Chr3	5859033	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131018201	SmilChr03G000539	131018201	rna-XM_057946926.1	5	A24,B102,B110,B134,B40