source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	6435330	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	A16,B18,B70,C58,C78
typical_cds_rare	Chr3	6435330	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	A16,B18,B70,C58,C78
typical_cds_rare	Chr3	6435334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	A16,B18,B70,C58,C78
typical_cds_rare	Chr3	6435341	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	A16,B18,B70,C58,C78
lof_cds	Chr3	6435379	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	106	A13,A16,A18,A20,A23,A25,A4,A5,A6,A7,B1,B10,B105,B106,B109,B112,B113,B114,B115,B12,B121,B126,B13,B130,B131,B132,B134,B136,B138,B15,B18,B22,B25,B28,B29,B32,B37,B38,B39,B40,B42,B43,B51,B52,B54,B61,B64,B68,B69,B7,B70,B71,B72,B73,B74,B75,B77,B82,B84,B86,B88,B89,B91,B94,B95,B98,C11,C15,C16,C21,C22,C24,C25,C28,C29,C31,C32,C34,C35,C39,C41,C42,C43,C46,C51,C52,C58,C63,C64,C65,C66,C68,C69,C72,C76,C77,C78,C8,C80,C81,D1,D11,D2,D4,D5,D7
typical_cds_rare	Chr3	6435426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	B25,B89,C16,C28,C81
typical_cds_rare	Chr3	6435431	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	A4,B115,B71,B98
typical_cds_rare	Chr3	6435450	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C60
typical_cds_rare	Chr3	6435462	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	D11
typical_cds_rare	Chr3	6435574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	A4,B73,B95,C24,C68
typical_cds_rare	Chr3	6435585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B115
typical_cds_rare	Chr3	6435599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C68
typical_cds_rare	Chr3	6435609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C71
lof_cds	Chr3	6435634	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	A22,C27
typical_cds_rare	Chr3	6435634	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	A22,C27
lof_cds	Chr3	6435758	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C78
typical_cds_rare	Chr3	6435758	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C78
lof_cds	Chr3	6435761	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C78
typical_cds_rare	Chr3	6435761	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C78
typical_cds_rare	Chr3	6435762	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	A22,C27
typical_cds_rare	Chr3	6435780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	3	A13,B8,C33
typical_cds_rare	Chr3	6435835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	B57,B61
typical_cds_rare	Chr3	6435860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	B10,B113,B117,B87
lof_cds	Chr3	6435894	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	3	B54,B86,C6
typical_cds_rare	Chr3	6435894	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	3	B54,B86,C6
lof_cds	Chr3	6435915	A	AGC	INDEL	2bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	B1,B126,B134,B68
typical_cds_rare	Chr3	6435915	A	AGC	INDEL	2bp_insertion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	B1,B126,B134,B68
typical_cds_rare	Chr3	6435918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	3	C45,C87,D11
typical_cds_rare	Chr3	6435928	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C30
lof_cds	Chr3	6435962	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	89	A10,A13,A16,A18,A2,A20,A23,A25,A4,A5,A6,A7,B1,B10,B105,B106,B109,B113,B115,B117,B121,B126,B13,B130,B131,B134,B136,B15,B18,B28,B29,B32,B34,B37,B38,B39,B42,B43,B51,B52,B54,B59,B61,B62,B68,B7,B70,B71,B72,B74,B75,B82,B84,B86,B87,B91,B98,C10,C11,C15,C21,C22,C29,C31,C34,C35,C36,C39,C43,C46,C51,C52,C58,C63,C64,C65,C66,C69,C72,C77,C78,C79,C8,C80,C85,D1,D5,D6,D7
lof_cds	Chr3	6435964	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	46	A10,A16,A18,A23,A25,A5,A6,A7,B109,B121,B130,B136,B15,B18,B32,B37,B42,B43,B51,B52,B54,B59,B62,B7,B70,B72,B74,B82,B84,B91,C11,C15,C29,C34,C35,C39,C43,C46,C52,C58,C63,C72,C77,C78,C85,D1
lof_cds	Chr3	6435967	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	48	A13,A2,A20,A4,B1,B10,B105,B106,B113,B115,B117,B121,B126,B13,B131,B134,B28,B29,B34,B38,B39,B42,B43,B61,B68,B71,B75,B86,B87,B91,B98,C10,C21,C22,C31,C36,C51,C64,C65,C66,C69,C78,C79,C8,C80,D5,D6,D7
lof_cds	Chr3	6435971	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	45	A10,A16,A18,A23,A25,A5,A6,A7,B109,B121,B130,B136,B15,B18,B32,B37,B42,B43,B51,B52,B54,B59,B62,B7,B70,B72,B74,B82,B84,B91,C11,C15,C29,C34,C35,C39,C43,C46,C52,C58,C63,C72,C77,C85,D1
typical_cds_rare	Chr3	6435990	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	B71,B98
typical_cds_rare	Chr3	6436120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	B118,B85
lof_cds	Chr3	6436128	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	A4,B115,B71,B98
typical_cds_rare	Chr3	6436128	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	A4,B115,B71,B98
typical_cds_rare	Chr3	6436149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	4	A4,B115,B71,B98
lof_cds	Chr3	6436187	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	6	A2,B10,B113,B117,B87,D1
lof_cds	Chr3	6436188	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	6	A2,B10,B113,B117,B87,D1
lof_cds	Chr3	6436237	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B75
typical_cds_rare	Chr3	6436237	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B75
typical_cds_rare	Chr3	6436262	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B120
typical_cds_rare	Chr3	6436330	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	C14
typical_cds_rare	Chr3	6436360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B26
typical_cds_rare	Chr3	6436362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B99
lof_cds	Chr3	6436383	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	119	A10,A13,A16,A18,A2,A20,A23,A25,A4,A5,A6,A7,B1,B10,B105,B109,B112,B113,B114,B115,B117,B121,B126,B13,B130,B131,B132,B133,B134,B136,B137,B138,B15,B18,B22,B23,B25,B28,B29,B32,B33,B34,B37,B38,B39,B40,B42,B43,B52,B54,B59,B61,B62,B64,B68,B69,B7,B70,B71,B72,B73,B74,B75,B77,B84,B86,B87,B88,B89,B91,B94,B95,B98,C11,C15,C16,C19,C20,C21,C22,C24,C25,C28,C29,C3,C31,C32,C34,C35,C36,C39,C41,C42,C43,C46,C51,C52,C58,C63,C65,C66,C68,C69,C72,C76,C77,C78,C79,C8,C80,C81,C85,D1,D11,D2,D4,D5,D6,D7
lof_cds	Chr3	6436386	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B26
typical_cds_rare	Chr3	6436386	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B26
lof_cds	Chr3	6436388	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	119	A10,A13,A16,A18,A2,A20,A23,A25,A4,A5,A6,A7,B1,B10,B105,B109,B112,B113,B114,B115,B117,B121,B126,B13,B130,B131,B132,B133,B134,B136,B137,B138,B15,B18,B22,B23,B25,B28,B29,B32,B33,B34,B37,B38,B39,B40,B42,B43,B52,B54,B59,B61,B62,B64,B68,B69,B7,B70,B71,B72,B73,B74,B75,B77,B84,B86,B87,B88,B89,B91,B94,B95,B98,C11,C15,C16,C19,C20,C21,C22,C24,C25,C28,C29,C3,C31,C32,C34,C35,C36,C39,C41,C42,C43,C46,C51,C52,C58,C63,C65,C66,C68,C69,C72,C76,C77,C78,C79,C8,C80,C81,C85,D1,D11,D2,D4,D5,D6,D7
typical_cds_rare	Chr3	6436435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	B119,B26
lof_cds	Chr3	6436439	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
typical_cds_rare	Chr3	6436439	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
typical_cds_rare	Chr3	6436441	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
lof_cds	Chr3	6436446	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	51	A2,A20,A4,A7,B10,B105,B106,B113,B115,B117,B13,B131,B132,B23,B28,B29,B34,B38,B39,B42,B43,B61,B71,B75,B86,B87,B91,B94,B98,C10,C11,C21,C22,C24,C29,C31,C36,C39,C51,C65,C66,C69,C72,C78,C79,C8,C80,D1,D5,D6,D7
lof_cds	Chr3	6436449	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
typical_cds_rare	Chr3	6436449	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
lof_cds	Chr3	6436450	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B26
typical_cds_rare	Chr3	6436450	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B26
typical_cds_rare	Chr3	6436455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	3	B104,C58,C85
lof_cds	Chr3	6436471	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
typical_cds_rare	Chr3	6436471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
typical_cds_rare	Chr3	6436477	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B119
typical_cds_rare	Chr3	6436483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B74
typical_cds_rare	Chr3	6436527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	A16,A23,B18,B70,C78
typical_cds_rare	Chr3	6436601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	5	B12,B138,B68,C65,D2
typical_cds_rare	Chr3	6436757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B13
lof_cds	Chr3	6436783	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	D1
typical_cds_rare	Chr3	6436783	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	D1
typical_cds_rare	Chr3	6436809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	1	B99
typical_cds_rare	Chr3	6436942	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017236	SmilChr03G000580	131017236	rna-XM_057945964.1	2	B40,C76