source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	7757826	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	5	A7,B110,B80,C35,D1
typical_cds_rare	Chr3	7757842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	B112,B60,B93,C85
typical_cds_rare	Chr3	7757847	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	A16,C11,C78,C87
typical_cds_rare	Chr3	7757871	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	B19,B35,D10
typical_cds_rare	Chr3	7757874	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	A8,B122,D2,D6
typical_cds_rare	Chr3	7757884	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C12
lof_cds	Chr3	7757902	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	128	A10,A13,A18,A19,A20,A22,A24,A4,A5,A7,A8,A9,B1,B100,B102,B103,B105,B106,B107,B108,B109,B110,B111,B112,B114,B115,B117,B120,B122,B124,B126,B127,B129,B13,B133,B134,B136,B137,B138,B139,B14,B140,B15,B22,B24,B26,B3,B32,B36,B37,B40,B42,B43,B44,B5,B54,B57,B58,B59,B6,B61,B62,B64,B66,B67,B68,B70,B72,B73,B74,B79,B8,B82,B83,B84,B85,B86,B88,B89,B91,C12,C14,C16,C17,C23,C24,C25,C26,C3,C30,C32,C33,C34,C35,C36,C38,C40,C42,C44,C46,C48,C49,C5,C52,C53,C59,C6,C60,C62,C64,C65,C68,C7,C70,C71,C72,C74,C75,C77,C8,C80,C81,C84,C86,D2,D4,D6,D9
lof_cds	Chr3	7757908	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C73
typical_cds_rare	Chr3	7757908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C73
typical_cds_rare	Chr3	7757915	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	A8,B122,D6
lof_cds	Chr3	7757927	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	B25
typical_cds_rare	Chr3	7757927	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	B25
lof_cds	Chr3	7757959	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	55	A14,A19,A20,A21,A25,A7,B1,B101,B103,B105,B108,B111,B115,B12,B121,B124,B130,B131,B135,B138,B17,B20,B23,B24,B32,B49,B50,B51,B65,B66,B68,B71,B78,B79,C1,C13,C15,C20,C24,C29,C31,C47,C49,C5,C52,C55,C57,C73,C78,C8,C84,C9,D2,D5,D7
lof_cds	Chr3	7757984	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	B112,B5,C13,C61
typical_cds_rare	Chr3	7757984	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	B112,B5,C13,C61
lof_cds	Chr3	7757988	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	56	A24,A8,A9,B1,B103,B114,B119,B12,B126,B131,B18,B26,B27,B30,B35,B38,B39,B4,B41,B43,B47,B48,B53,B55,B59,B61,B64,B66,B7,B71,B77,B85,B90,B91,B92,B95,C15,C21,C22,C25,C29,C31,C40,C41,C45,C50,C55,C59,C63,C70,C74,C77,C9,D7,D8,D9
typical_cds_rare	Chr3	7757991	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	A7
lof_cds	Chr3	7757993	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	A23,B18,B70
typical_cds_rare	Chr3	7757993	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	A23,B18,B70
lof_cds	Chr3	7758001	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	52	A1,A18,A24,A8,A9,B1,B103,B114,B119,B12,B131,B18,B26,B27,B30,B35,B38,B39,B4,B41,B43,B47,B48,B5,B53,B55,B57,B61,B66,B7,B77,B90,B91,B92,B95,C13,C21,C22,C25,C29,C31,C34,C40,C41,C45,C50,C63,C74,C77,D7,D8,D9
typical_cds_rare	Chr3	7758018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	B30
typical_cds_rare	Chr3	7758048	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C22
typical_cds_rare	Chr3	7758073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C13
lof_cds	Chr3	7758091	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	22	A10,A16,A18,A24,B125,B126,B129,B130,B134,B45,B46,B64,B74,B95,B96,C21,C28,C36,C54,C71,D7,D9
typical_cds_rare	Chr3	7758101	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	B75
lof_cds	Chr3	7758198	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	10	B115,B137,B18,B26,B86,B97,C18,C44,C86,D4
lof_cds	Chr3	7758210	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	181	A1,A10,A11,A13,A16,A18,A19,A2,A20,A22,A23,A25,A3,A5,A6,A7,A9,B101,B103,B104,B106,B107,B108,B109,B11,B110,B112,B114,B115,B117,B118,B119,B12,B120,B121,B123,B126,B127,B128,B129,B130,B131,B132,B133,B136,B137,B138,B139,B14,B140,B15,B17,B18,B22,B23,B24,B25,B26,B29,B3,B31,B32,B33,B34,B35,B36,B39,B4,B40,B42,B43,B44,B47,B49,B5,B51,B52,B54,B56,B57,B59,B6,B60,B61,B62,B63,B65,B66,B68,B7,B70,B71,B72,B73,B75,B76,B79,B8,B80,B82,B83,B84,B85,B86,B90,B91,B93,B94,B96,B97,C1,C10,C12,C13,C14,C16,C17,C18,C19,C20,C21,C23,C24,C26,C28,C3,C32,C33,C34,C35,C36,C39,C40,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C54,C56,C57,C58,C59,C6,C60,C61,C62,C65,C66,C68,C69,C7,C71,C72,C74,C75,C77,C78,C79,C8,C80,C82,C83,C84,C85,C86,C9,D11,D2,D3,D4,D6,D7,D8,D9
lof_cds	Chr3	7758214	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	169	A1,A10,A11,A13,A16,A18,A19,A2,A20,A22,A23,A25,A3,A5,A6,A7,A9,B101,B103,B104,B106,B107,B108,B109,B11,B110,B112,B114,B115,B117,B118,B119,B12,B120,B121,B123,B126,B127,B128,B129,B130,B131,B132,B133,B136,B137,B138,B139,B14,B140,B15,B17,B18,B22,B23,B24,B26,B29,B3,B32,B33,B34,B35,B36,B4,B40,B43,B44,B47,B49,B5,B51,B52,B54,B56,B57,B58,B59,B6,B61,B62,B63,B65,B66,B68,B7,B70,B71,B72,B73,B75,B76,B79,B8,B80,B82,B83,B84,B85,B86,B90,B94,B96,B97,C1,C10,C12,C13,C14,C16,C17,C19,C20,C21,C23,C24,C26,C28,C3,C32,C33,C34,C35,C36,C39,C40,C43,C44,C45,C46,C47,C49,C5,C51,C52,C54,C56,C57,C58,C59,C60,C61,C62,C65,C66,C68,C69,C7,C71,C72,C74,C75,C77,C78,C79,C8,C80,C82,C84,C85,C86,C9,D11,D2,D3,D4,D7,D8,D9
typical_cds_rare	Chr3	7758227	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C12
typical_cds_rare	Chr3	7758243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	B130,B53,C62
lof_cds	Chr3	7758279	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	52	A11,A19,A2,A20,A22,A3,A4,A5,A9,B102,B105,B110,B117,B123,B124,B136,B137,B14,B140,B21,B22,B23,B33,B35,B49,B51,B52,B61,B70,B81,B82,C1,C14,C16,C23,C32,C35,C39,C48,C58,C64,C66,C68,C74,C79,C80,C81,C82,C84,C85,D11,D2
typical_cds_rare	Chr3	7758389	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	2	C10,C21
lof_cds	Chr3	7758397	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	9	B117,B125,B19,B35,C14,C21,C4,C73,D10
lof_cds	Chr3	7758398	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	105	A1,A14,A15,A18,A2,A21,A23,A25,A3,A4,A7,A8,B100,B101,B103,B104,B106,B108,B11,B110,B113,B12,B121,B122,B127,B13,B131,B132,B134,B135,B137,B138,B15,B16,B22,B23,B27,B30,B31,B40,B43,B44,B46,B47,B48,B52,B55,B56,B57,B59,B60,B66,B7,B70,B71,B74,B76,B77,B78,B8,B80,B85,B90,B92,B96,C11,C13,C15,C22,C23,C24,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C39,C42,C45,C47,C49,C50,C54,C55,C59,C6,C60,C61,C62,C68,C72,C77,C78,C8,C82,C83,D1,D4,D8,D9
typical_cds_rare	Chr3	7758406	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C77
typical_cds_rare	Chr3	7758426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	B140,C20,C65
typical_cds_rare	Chr3	7758430	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	5	B124,B136,B82,C48,C52
lof_cds	Chr3	7758438	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	7	B102,B119,B124,B136,B18,B61,B85
typical_cds_rare	Chr3	7758445	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	B140,B45,C20,C65
typical_cds_rare	Chr3	7758452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	A16,C78,C87
typical_cds_rare	Chr3	7758471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	B67,C4,C46,D11
lof_cds	Chr3	7758489	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	16	A15,A18,B19,B3,B44,B55,B56,B62,B75,B80,B94,B96,C47,C62,C81,C86
lof_cds	Chr3	7758528	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	18	A10,A16,A24,B12,B125,B126,B129,B130,B64,B95,B96,C2,C54,C59,C70,C71,D7,D9
typical_cds_rare	Chr3	7758536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	4	A16,A9,B136,B26
lof_cds	Chr3	7758569	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	110	A1,A10,A13,A18,A20,A22,A23,A24,A25,A4,A5,A6,A7,A9,B1,B100,B103,B106,B109,B111,B112,B118,B120,B121,B126,B128,B129,B13,B131,B133,B138,B139,B14,B140,B15,B22,B27,B28,B29,B30,B34,B36,B37,B39,B42,B43,B46,B5,B51,B54,B57,B59,B6,B61,B62,B63,B64,B68,B7,B72,B73,B74,B79,B82,B83,B84,B86,B87,B88,B9,B91,B95,B98,C11,C14,C17,C24,C25,C26,C27,C29,C30,C32,C34,C35,C36,C38,C39,C40,C42,C43,C44,C46,C5,C51,C53,C59,C65,C68,C69,C7,C70,C71,C72,C75,C77,C80,C87,D3,D9
typical_cds_rare	Chr3	7758613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C12
lof_cds	Chr3	7758642	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	51	A13,A14,A15,A21,A6,A8,B101,B114,B126,B130,B137,B15,B16,B17,B21,B25,B31,B33,B4,B45,B47,B48,B53,B63,B77,B8,B83,B88,B9,B90,B92,B97,B99,C12,C19,C2,C22,C23,C26,C28,C3,C33,C41,C45,C58,C59,C62,C75,C81,C83,C85
lof_cds	Chr3	7758643	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C85
typical_cds_rare	Chr3	7758643	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	1	C85
typical_cds_rare	Chr3	7758659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	3	B117,B125,C73
lof_cds	Chr3	7758664	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	2	B25,C85
typical_cds_rare	Chr3	7758664	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	2	B25,C85
lof_cds	Chr3	7758670	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	2	B25,C85
typical_cds_rare	Chr3	7758670	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	2	B25,C85
lof_cds	Chr3	7758672	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018246	SmilChr03G000695	131018246	rna-XM_057946970.1	28	B31,B38,B39,B42,B43,B50,B6,B60,B69,B91,B93,C18,C19,C2,C38,C48,C50,C58,C6,C61,C64,C66,C67,C76,C83,D10,D11,D6