source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	9106367	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	A23,B14,C16
typical_cds_rare	Chr3	9106367	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	A23,B14,C16
typical_cds_rare	Chr3	9106375	GGC	*	INDEL	2bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	A23,B14,B90,C16
lof_cds	Chr3	9106383	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	A23,B14,B90,C16
typical_cds_rare	Chr3	9106383	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	A23,B14,B90,C16
typical_cds_rare	Chr3	9106487	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	A1,C54
typical_cds_rare	Chr3	9106539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B130
lof_cds	Chr3	9106581	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	B115,B59,B84,C1,D2
typical_cds_rare	Chr3	9106581	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	B115,B59,B84,C1,D2
lof_cds	Chr3	9106650	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	75	A1,A14,A16,A19,A22,A23,A24,B103,B104,B109,B112,B115,B118,B123,B127,B129,B130,B131,B133,B139,B14,B15,B16,B24,B27,B29,B32,B36,B37,B39,B4,B40,B46,B52,B54,B57,B58,B59,B64,B65,B69,B72,B76,B83,B84,B88,B89,B90,B92,B94,C1,C10,C13,C24,C29,C3,C36,C37,C46,C49,C52,C54,C55,C61,C7,C71,C73,C74,C77,C9,D1,D10,D2,D3,D4
lof_cds	Chr3	9106673	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	47	A2,A4,B100,B102,B103,B105,B109,B117,B118,B119,B123,B13,B130,B133,B136,B137,B139,B14,B20,B26,B29,B36,B37,B4,B50,B55,B57,B67,B69,B72,B78,B88,B89,B90,B92,C29,C32,C50,C68,C72,C77,C78,C82,C85,C9,D4,D8
typical_cds_rare	Chr3	9106713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	C31
lof_cds	Chr3	9108341	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	97	A10,A11,A13,A2,A21,A22,A3,A6,A7,B1,B108,B115,B117,B124,B126,B132,B134,B135,B20,B24,B25,B27,B3,B33,B38,B39,B4,B47,B48,B49,B53,B56,B59,B6,B62,B68,B7,B71,B73,B76,B77,B79,B8,B80,B81,B85,B9,B91,B94,B96,B98,B99,C1,C10,C11,C14,C18,C19,C2,C21,C22,C25,C26,C30,C31,C33,C34,C36,C40,C41,C42,C44,C45,C48,C56,C58,C6,C60,C61,C62,C63,C64,C66,C67,C69,C8,C81,C82,C83,C85,C87,D11,D5,D6,D7,D8,D9
lof_cds	Chr3	9108359	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B124,B85,C25,D11
typical_cds_rare	Chr3	9108359	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B124,B85,C25,D11
typical_cds_rare	Chr3	9108388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B40,B54,B86
typical_cds_rare	Chr3	9108394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	D11
typical_cds_rare	Chr3	9108599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B40,B54,B86
typical_cds_rare	Chr3	9108604	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B42,C70
typical_cds_rare	Chr3	9108613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B42,C70
typical_cds_rare	Chr3	9108656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B98,C8
typical_cds_rare	Chr3	9108783	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B135,C2,C62
lof_cds	Chr3	9108815	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	34	A13,A15,A21,A6,B124,B134,B25,B27,B34,B38,B39,B56,B59,B62,B71,B73,B75,B80,B85,B91,B96,B98,C21,C25,C40,C6,C62,C8,C81,C82,C85,D11,D6,D8
typical_cds_rare	Chr3	9108929	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B77,C54,C81,C9
lof_cds	Chr3	9108958	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B108,C36
typical_cds_rare	Chr3	9108958	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B108,C36
typical_cds_rare	Chr3	9108964	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B110
typical_cds_rare	Chr3	9108992	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B19,C12,C59
typical_cds_rare	Chr3	9109045	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	C35
lof_cds	Chr3	9109143	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B30
typical_cds_rare	Chr3	9109143	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B30
typical_cds_rare	Chr3	9109172	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B10,B22
typical_cds_rare	Chr3	9109186	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B135,C2,C62
typical_cds_rare	Chr3	9109225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	B22,B42,B43,B65,C19
lof_cds	Chr3	9109413	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B59,D8
typical_cds_rare	Chr3	9109413	CGA	C	INDEL	2bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B59,D8
typical_cds_rare	Chr3	9109433	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B128,B5,B63,B95
typical_cds_rare	Chr3	9109475	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	A14
typical_cds_rare	Chr3	9109600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	B120,B41,B53,C57,C77
typical_cds_rare	Chr3	9109678	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B118,C11,C63,C69
lof_cds	Chr3	9109754	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B106
typical_cds_rare	Chr3	9109754	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B106
typical_cds_rare	Chr3	9109807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B22,B95,C19
typical_cds_rare	Chr3	9109831	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B22,B42,B43
typical_cds_rare	Chr3	9109860	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B123,B19
typical_cds_rare	Chr3	9109908	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B109,B131,B6
typical_cds_rare	Chr3	9109920	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	A25,B139,B87,D10
typical_cds_rare	Chr3	9109925	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B65
typical_cds_rare	Chr3	9109928	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B126,B65,C20,C6
typical_cds_rare	Chr3	9109933	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B87
typical_cds_rare	Chr3	9109970	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B102,B118
typical_cds_rare	Chr3	9109999	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	A25,B139,D10,D11
typical_cds_rare	Chr3	9110042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	B109,B131,B6,B89,C25
typical_cds_rare	Chr3	9110057	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B43
typical_cds_rare	Chr3	9110062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B124
typical_cds_rare	Chr3	9110073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	4	B42,B43,B6,C25
typical_cds_rare	Chr3	9110143	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	1	B43
typical_cds_rare	Chr3	9110191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B93,C53
typical_cds_rare	Chr3	9110201	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B110,D10
typical_cds_rare	Chr3	9110209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B113,D5
lof_cds	Chr3	9110235	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	7	A15,A6,B21,B62,B75,C62,C81
typical_cds_rare	Chr3	9110262	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B53,C57,C77
typical_cds_rare	Chr3	9110267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	B10,B118,B22,B42,B43
lof_cds	Chr3	9110276	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	12	B10,B110,B118,B19,B22,B42,B43,B49,B65,C12,C19,C6
lof_cds	Chr3	9110297	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	A6,B71,B75,C62,C81
typical_cds_rare	Chr3	9110297	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	5	A6,B71,B75,C62,C81
typical_cds_rare	Chr3	9110309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B42,B43
typical_cds_rare	Chr3	9110339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B46,C61,D3
typical_cds_rare	Chr3	9110346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B109,C25
typical_cds_rare	Chr3	9110371	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B126,B65
typical_cds_rare	Chr3	9110376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	2	B126,B65
typical_cds_rare	Chr3	9110435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	B105,C13,C70
typical_cds_rare	Chr3	9110488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017408	SmilChr03G000796	131017408	rna-XM_057946162.1	3	A18,B138,C86