source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	9427923	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B93,C20,C53,C6
lof_cds	Chr3	9428006	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B25
typical_cds_rare	Chr3	9428006	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B25
lof_cds	Chr3	9428007	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	A6,B125,B98
typical_cds_rare	Chr3	9428007	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	A6,B125,B98
lof_cds	Chr3	9428011	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B21
typical_cds_rare	Chr3	9428011	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B21
typical_cds_rare	Chr3	9428024	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B21,B25
lof_cds	Chr3	9428026	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A21,A24,B46,B52,C59
typical_cds_rare	Chr3	9428026	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A21,A24,B46,B52,C59
typical_cds_rare	Chr3	9428031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B109,C31
lof_cds	Chr3	9428066	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	18	A21,B109,B110,B120,B28,B44,B54,B64,B69,B7,B75,B77,B87,B88,C31,C47,C67,D10
lof_cds	Chr3	9428075	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B44,C47
typical_cds_rare	Chr3	9428075	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B44,C47
lof_cds	Chr3	9428080	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	14	A21,B120,B28,B44,B54,B64,B69,B77,B87,B88,C31,C47,C67,D10
typical_cds_rare	Chr3	9428086	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A3,A7,B100,B33,B53
lof_cds	Chr3	9428140	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	12	A19,B103,B111,B114,B125,B69,B85,C17,C30,C61,C83,C87
lof_cds	Chr3	9428144	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	11	A19,B103,B111,B114,B69,B85,C17,C30,C61,C83,C87
typical_cds_rare	Chr3	9428234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B17,B36,C63
typical_cds_rare	Chr3	9428306	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	A4,A5,B122
typical_cds_rare	Chr3	9428328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B72
lof_cds	Chr3	9428347	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	54	A21,A23,A24,A25,B101,B104,B107,B121,B123,B134,B137,B16,B2,B20,B23,B26,B39,B40,B43,B5,B52,B54,B62,B66,B7,B71,B75,B77,B79,B83,B86,B88,B9,B94,B99,C19,C20,C28,C3,C30,C36,C40,C46,C48,C5,C52,C6,C63,C69,C75,C79,C9,D2,D9
lof_cds	Chr3	9428350	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	11	A3,A6,B103,B108,B13,B17,B33,B99,C19,C28,C49
lof_cds	Chr3	9428359	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	49	A21,A23,A25,B101,B104,B107,B121,B123,B132,B134,B137,B16,B2,B20,B23,B26,B39,B43,B5,B52,B54,B62,B71,B75,B77,B79,B83,B86,B88,B9,B94,B99,C19,C20,C28,C3,C30,C36,C46,C48,C5,C52,C6,C63,C75,C79,C9,D2,D9
typical_cds_rare	Chr3	9428363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A24,B5,B75,C28,C40
typical_cds_rare	Chr3	9428397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B137
typical_cds_rare	Chr3	9428410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B105,B14,B36,B59
lof_cds	Chr3	9428431	A	ACT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	16	B106,B111,B30,B37,B6,B61,B67,B72,B8,B84,C21,C36,C67,C69,C83,C84
lof_cds	Chr3	9428434	A	ATC	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	27	A13,A19,B112,B115,B117,B121,B135,B18,B2,B20,B23,B36,B56,B59,B63,B71,B81,B83,B88,B95,B96,B98,C39,C59,C68,C73,C74
lof_cds	Chr3	9428435	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	27	A13,A19,B112,B115,B117,B121,B135,B18,B2,B20,B23,B36,B56,B59,B63,B71,B81,B83,B88,B95,B96,B98,C39,C59,C68,C73,C74
lof_cds	Chr3	9428440	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B72,B94,C13,C44
typical_cds_rare	Chr3	9428440	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B72,B94,C13,C44
typical_cds_rare	Chr3	9428460	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B102
typical_cds_rare	Chr3	9428461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	C2,C42,C58
typical_cds_rare	Chr3	9428470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A3,A7,B100,B33,B53
typical_cds_rare	Chr3	9428476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B100
lof_cds	Chr3	9428493	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	A6,B16,B18,C76
typical_cds_rare	Chr3	9428493	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	A6,B16,B18,C76
lof_cds	Chr3	9428501	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	7	B1,B119,B22,B40,B94,C47,C66
lof_cds	Chr3	9428513	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B1,B22,B94,C47,C66
typical_cds_rare	Chr3	9428513	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B1,B22,B94,C47,C66
lof_cds	Chr3	9428514	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	28	B108,B111,B113,B122,B124,B129,B2,B21,B31,B32,B44,B54,B61,B64,B66,B91,B93,C19,C2,C28,C3,C37,C42,C51,C58,C60,C76,D2
lof_cds	Chr3	9428516	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	29	B108,B111,B113,B122,B124,B129,B2,B21,B31,B32,B44,B54,B61,B64,B66,B83,B91,B93,C19,C2,C28,C3,C37,C42,C51,C58,C60,C76,D2
lof_cds	Chr3	9428526	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	6	B21,B64,B66,B83,B86,C19
typical_cds_rare	Chr3	9428538	AAT	*	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B106,B30,B83,B86,C36
lof_cds	Chr3	9428583	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A19,B103,B70,B89,B96
typical_cds_rare	Chr3	9428583	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A19,B103,B70,B89,B96
lof_cds	Chr3	9428587	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A19,B103,B70,B89,B96
typical_cds_rare	Chr3	9428587	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A19,B103,B70,B89,B96
typical_cds_rare	Chr3	9428589	CG	*	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B113,B30,C36
typical_cds_rare	Chr3	9428613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B113,B22
typical_cds_rare	Chr3	9428634	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B130,B34,B38,C1
typical_cds_rare	Chr3	9428666	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A11,B95,C14,C56,C82
lof_cds	Chr3	9428677	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B127
typical_cds_rare	Chr3	9428677	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B127
typical_cds_rare	Chr3	9428682	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B105
typical_cds_rare	Chr3	9428709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B93,C53,C56
typical_cds_rare	Chr3	9428728	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A7,B40,B8,B80,C42
typical_cds_rare	Chr3	9428736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	A19,B121,B127
typical_cds_rare	Chr3	9428744	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B99,D7
typical_cds_rare	Chr3	9428768	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	A11,B93,C53
lof_cds	Chr3	9428853	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	A11,A4
typical_cds_rare	Chr3	9428853	T	TCG	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	A11,A4
typical_cds_rare	Chr3	9428858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B93,C53
typical_cds_rare	Chr3	9428865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B72,C83
typical_cds_rare	Chr3	9428881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B119,B140,B15
typical_cds_rare	Chr3	9428885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B121,B137,B21,C79,C83
typical_cds_rare	Chr3	9428895	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B137,C79
typical_cds_rare	Chr3	9428946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	A5
typical_cds_rare	Chr3	9428990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B19,B21,C17,C85
typical_cds_rare	Chr3	9429029	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B115,B14
typical_cds_rare	Chr3	9429057	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C79
typical_cds_rare	Chr3	9429103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B75
typical_cds_rare	Chr3	9429106	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B117,B120,C9
lof_cds	Chr3	9429112	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B100,B137,B56,B70,C86
typical_cds_rare	Chr3	9429112	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B100,B137,B56,B70,C86
lof_cds	Chr3	9429114	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B100,B137,B56,B70,C86
typical_cds_rare	Chr3	9429114	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B100,B137,B56,B70,C86
lof_cds	Chr3	9429234	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	8	B111,B78,C17,C30,C5,C75,C76,D9
typical_cds_rare	Chr3	9429238	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B41,B53,C47
lof_cds	Chr3	9429251	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C70
typical_cds_rare	Chr3	9429251	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C70
typical_cds_rare	Chr3	9429274	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B131,B41,B53,C47
typical_cds_rare	Chr3	9429291	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B67
typical_cds_rare	Chr3	9429299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B102,B126,B42,B43,B65
typical_cds_rare	Chr3	9429332	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C70
typical_cds_rare	Chr3	9429338	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B67
typical_cds_rare	Chr3	9429343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B59
typical_cds_rare	Chr3	9429359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B1,B19,B36,B59,B6
lof_cds	Chr3	9429364	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	61	A10,A14,A3,A8,B1,B101,B104,B105,B111,B115,B118,B119,B122,B123,B124,B13,B134,B138,B29,B37,B40,B67,B68,B70,B79,B81,B82,B90,B91,B93,B97,C15,C16,C2,C29,C31,C32,C33,C36,C38,C4,C40,C46,C49,C5,C50,C60,C61,C65,C69,C70,C77,C79,C85,C86,D1,D11,D2,D3,D8,D9
lof_cds	Chr3	9429368	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	7	A10,B1,B119,B124,B15,C16,C46
lof_cds	Chr3	9429370	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	70	A14,A3,A8,B105,B111,B112,B118,B120,B122,B123,B124,B127,B128,B132,B136,B138,B140,B15,B18,B19,B29,B35,B36,B37,B40,B58,B59,B66,B67,B79,B81,B84,B85,B9,B90,B91,B93,C15,C16,C18,C2,C28,C31,C32,C33,C36,C38,C4,C40,C49,C5,C54,C57,C58,C60,C61,C64,C66,C69,C70,C79,C85,C86,C9,D1,D10,D11,D2,D3,D8
lof_cds	Chr3	9429379	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B13
typical_cds_rare	Chr3	9429379	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B13
typical_cds_rare	Chr3	9429389	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B132,C50,C52,C63
typical_cds_rare	Chr3	9429391	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B123,B125,B89
typical_cds_rare	Chr3	9429407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B81,C28,C58
typical_cds_rare	Chr3	9429428	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B87,B92,D8
typical_cds_rare	Chr3	9429432	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B59,B62,C65
typical_cds_rare	Chr3	9429447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B123,B126,B19,C60
lof_cds	Chr3	9429458	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B78
typical_cds_rare	Chr3	9429458	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B78
typical_cds_rare	Chr3	9429465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B78
lof_cds	Chr3	9429470	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	25	A15,A16,A6,B104,B131,B16,B26,B27,B31,B4,B55,B65,B74,C25,C31,C39,C45,C53,C6,C66,C78,C83,C87,D11,D2
lof_cds	Chr3	9429472	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	25	A15,A16,A6,B104,B131,B16,B26,B27,B31,B4,B55,B65,B74,C25,C31,C39,C45,C53,C6,C66,C78,C83,C87,D11,D2
typical_cds_rare	Chr3	9429478	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A3,A7,B100,B33,B53
typical_cds_rare	Chr3	9429486	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B111,C30,C75,C76
typical_cds_rare	Chr3	9429491	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B118,C72
typical_cds_rare	Chr3	9429493	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B35,B59,B85,C50
typical_cds_rare	Chr3	9429494	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	A16,D11
typical_cds_rare	Chr3	9429509	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B106,B139,C38,C56,D5
lof_cds	Chr3	9429536	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B123
typical_cds_rare	Chr3	9429536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B123
lof_cds	Chr3	9429538	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C20
typical_cds_rare	Chr3	9429538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C20
lof_cds	Chr3	9429586	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	26	A16,B134,B136,B140,B35,B42,B43,B50,B84,B86,B9,B95,B97,C15,C16,C42,C51,C52,C54,C55,C57,C62,C67,C69,C8,C86
lof_cds	Chr3	9429591	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	105	A10,A11,A13,A14,A18,A2,A20,A21,A22,A24,A3,A5,A7,A9,B100,B101,B106,B107,B108,B11,B118,B12,B120,B127,B130,B134,B136,B137,B139,B140,B2,B20,B21,B27,B33,B34,B35,B36,B37,B40,B41,B42,B43,B44,B46,B5,B50,B52,B53,B57,B62,B63,B66,B7,B73,B82,B84,B9,B93,B94,B95,B97,C1,C11,C14,C15,C16,C18,C20,C21,C22,C27,C31,C35,C37,C4,C42,C44,C46,C50,C51,C52,C54,C56,C57,C58,C59,C6,C61,C62,C63,C64,C69,C7,C72,C8,C80,C81,C82,C9,D4,D5,D6,D7,D9
typical_cds_rare	Chr3	9429603	AGG	*	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B139,C22,C57,C69
typical_cds_rare	Chr3	9429612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B111,C17
typical_cds_rare	Chr3	9429614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B63
lof_cds	Chr3	9429628	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B68
typical_cds_rare	Chr3	9429628	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B68
typical_cds_rare	Chr3	9429631	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A10,B90,C18,C3,C66
lof_cds	Chr3	9429632	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	30	A2,A24,B1,B119,B129,B13,B132,B136,B138,B140,B26,B30,B32,B35,B61,B66,B78,B84,B85,B9,B91,B93,B98,C15,C24,C38,C46,C51,C54,C77
lof_cds	Chr3	9429638	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	65	A11,A13,A2,A3,A7,B100,B103,B105,B108,B109,B115,B117,B125,B126,B128,B129,B131,B132,B135,B137,B17,B23,B3,B33,B4,B40,B45,B53,B55,B7,B71,B79,B85,B89,B99,C10,C12,C19,C2,C22,C3,C32,C36,C4,C43,C46,C5,C50,C55,C58,C59,C62,C64,C68,C73,C74,C75,C76,C78,C8,C81,C9,D1,D2,D9
typical_cds_rare	Chr3	9429994	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B50
typical_cds_rare	Chr3	9430003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B50
typical_cds_rare	Chr3	9430015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C50
typical_cds_rare	Chr3	9430034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B117,B28,C50
lof_cds	Chr3	9430052	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B103
typical_cds_rare	Chr3	9430052	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B103
typical_cds_rare	Chr3	9430067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B21,B53,C35,C78,C85
typical_cds_rare	Chr3	9430080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B11,B128,B17,B37,B99
typical_cds_rare	Chr3	9430112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B22
lof_cds	Chr3	9430152	A	ATC	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C83
typical_cds_rare	Chr3	9430152	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C83
typical_cds_rare	Chr3	9430186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B52,C75
typical_cds_rare	Chr3	9430198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B29,C21,C31,C45,C60
lof_cds	Chr3	9430272	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430272	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
lof_cds	Chr3	9430275	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B21,C35
typical_cds_rare	Chr3	9430275	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B21,C35
lof_cds	Chr3	9430277	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B105,B21,B67,C35
typical_cds_rare	Chr3	9430277	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B105,B21,B67,C35
lof_cds	Chr3	9430278	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B105,B21,B67,C35
typical_cds_rare	Chr3	9430278	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	4	B105,B21,B67,C35
lof_cds	Chr3	9430284	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430284	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430290	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B21,C35,C75
lof_cds	Chr3	9430291	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430291	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C8
lof_cds	Chr3	9430301	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430301	CCT	C	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
lof_cds	Chr3	9430306	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430306	T	TAG	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B105,B67
typical_cds_rare	Chr3	9430308	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	A20,B105,B15,B67,C75
typical_cds_rare	Chr3	9430363	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	C21,C56,C8
typical_cds_rare	Chr3	9430367	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	C21,C56,C8
lof_cds	Chr3	9430386	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	21	A10,A18,A22,A7,B111,B75,B78,C11,C17,C18,C2,C30,C5,C58,C69,C71,C75,C76,C82,D7,D9
lof_cds	Chr3	9430388	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	21	A10,A18,A22,A7,B111,B75,B78,C11,C17,C18,C2,C30,C5,C58,C69,C71,C75,C76,C82,D7,D9
lof_cds	Chr3	9430395	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	21	A10,A18,A22,A7,B111,B75,B78,C11,C17,C18,C2,C30,C5,C58,C69,C71,C75,C76,C82,D7,D9
lof_cds	Chr3	9430398	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	20	A10,A18,A22,B111,B75,B78,C11,C17,C18,C2,C30,C5,C58,C69,C71,C75,C76,C82,D7,D9
typical_cds_rare	Chr3	9430409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B93,C53
typical_cds_rare	Chr3	9430412	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C71
lof_cds	Chr3	9430456	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B87
typical_cds_rare	Chr3	9430456	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B87
typical_cds_rare	Chr3	9430470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B36,B87
lof_cds	Chr3	9430479	T	TTC	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B36,B87
typical_cds_rare	Chr3	9430479	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	B36,B87
typical_cds_rare	Chr3	9430553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B65,B93,C20,C53,C6
typical_cds_rare	Chr3	9430573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B96
typical_cds_rare	Chr3	9430585	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	2	C57,C77
typical_cds_rare	Chr3	9430586	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B129,C42,C44,C57,C77
typical_cds_rare	Chr3	9430601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	C16
lof_cds	Chr3	9430620	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	12	A19,A20,A8,B106,B108,B11,B36,B44,C23,C35,C36,C78
lof_cds	Chr3	9430665	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	7	B111,B136,B2,C46,C51,C61,D9
typical_cds_rare	Chr3	9430687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	5	B56,B70,C57,C68,D6
lof_cds	Chr3	9430690	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B6
typical_cds_rare	Chr3	9430690	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	1	B6
typical_cds_rare	Chr3	9430693	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018278	SmilChr03G000824	131018278	rna-XM_057947002.1	3	B56,B70,C68