source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	9572419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B20,B5,B57
typical_cds_rare	Chr3	9572483	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	D3
typical_cds_rare	Chr3	9572518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B41,C10,C42
typical_cds_rare	Chr3	9572552	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B118,C23
typical_cds_rare	Chr3	9572582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B99,D7
typical_cds_rare	Chr3	9572619	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B20,B5,B57
lof_cds	Chr3	9572644	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	10	A2,A9,B110,B115,B117,B134,B49,C31,C57,C82
typical_cds_rare	Chr3	9572743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B75
typical_cds_rare	Chr3	9572786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B24
typical_cds_rare	Chr3	9572803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B29,C28
typical_cds_rare	Chr3	9572835	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	C25
typical_cds_rare	Chr3	9572841	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	C21,D11
lof_cds	Chr3	9572901	G	GA	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	C21,D11
typical_cds_rare	Chr3	9572901	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	C21,D11
typical_cds_rare	Chr3	9572904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	C21,D11
typical_cds_rare	Chr3	9572911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	A20,B139,B6,B87
lof_cds	Chr3	9572912	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	16	B101,B13,B134,B16,B35,B54,B66,B70,B97,C15,C50,C77,C79,C9,D2,D9
typical_cds_rare	Chr3	9572954	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B75
lof_cds	Chr3	9572958	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B75
typical_cds_rare	Chr3	9572958	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B75
lof_cds	Chr3	9572967	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	A9,B102,B28,C55,C70
typical_cds_rare	Chr3	9572967	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	A9,B102,B28,C55,C70
lof_cds	Chr3	9573004	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B94
typical_cds_rare	Chr3	9573004	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B94
typical_cds_rare	Chr3	9573017	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B99,D7
typical_cds_rare	Chr3	9573030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B34,C87
typical_cds_rare	Chr3	9573094	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	B114,B25,C41,C81,C84
typical_cds_rare	Chr3	9573095	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B93,C53
typical_cds_rare	Chr3	9573191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	C23,C78
typical_cds_rare	Chr3	9573230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	C21
typical_cds_rare	Chr3	9573247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B93,C53
typical_cds_rare	Chr3	9573289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	B38,B39,C14,C7
typical_cds_rare	Chr3	9573324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	B41,B94,C10,C74
typical_cds_rare	Chr3	9573345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B63,B83,C27
typical_cds_rare	Chr3	9573351	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B35
typical_cds_rare	Chr3	9573385	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	C72
typical_cds_rare	Chr3	9573428	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	D10
typical_cds_rare	Chr3	9573447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B41,C10,C74
typical_cds_rare	Chr3	9573475	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B35,C31,C45
lof_cds	Chr3	9573509	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	6	B106,B6,B72,B84,C33,C61
lof_cds	Chr3	9573560	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	B106,B6,B72,C61
typical_cds_rare	Chr3	9573560	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	B106,B6,B72,C61
typical_cds_rare	Chr3	9573571	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	B16,B2,B97,C50,C7
typical_cds_rare	Chr3	9573575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	B16,B2,B97,C50,C7
typical_cds_rare	Chr3	9573577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	B16,B2,B97,C50,C7
typical_cds_rare	Chr3	9573627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B102,D5
typical_cds_rare	Chr3	9573688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B13,B93,C53
typical_cds_rare	Chr3	9573691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	A8,B104,B118,B34,C87
lof_cds	Chr3	9573696	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	6	B114,B25,B78,C41,C81,C84
typical_cds_rare	Chr3	9573750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	A18,B58,C24,C58
typical_cds_rare	Chr3	9573752	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B41,C10,C74
typical_cds_rare	Chr3	9573802	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B41,C10,C74
lof_cds	Chr3	9573821	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B93,C53
typical_cds_rare	Chr3	9573821	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B93,C53
typical_cds_rare	Chr3	9573832	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B51,B93,C65
typical_cds_rare	Chr3	9573898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B5,B57,C53
typical_cds_rare	Chr3	9573914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	C71
typical_cds_rare	Chr3	9573917	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B27,C28
typical_cds_rare	Chr3	9573944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B40
typical_cds_rare	Chr3	9574052	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B35
lof_cds	Chr3	9574056	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B41
typical_cds_rare	Chr3	9574056	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B41
lof_cds	Chr3	9574104	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	110	A10,A18,A25,A3,A4,A5,A8,A9,B1,B101,B102,B107,B11,B111,B113,B118,B12,B120,B121,B122,B123,B126,B127,B13,B130,B131,B134,B15,B16,B19,B20,B21,B22,B24,B26,B3,B35,B36,B38,B39,B40,B41,B44,B46,B47,B48,B50,B53,B54,B55,B59,B62,B64,B65,B66,B68,B69,B70,B73,B75,B79,B82,B87,B89,B93,B94,B97,C11,C14,C15,C16,C18,C2,C24,C25,C26,C29,C3,C31,C32,C35,C38,C39,C42,C46,C47,C48,C50,C53,C54,C57,C58,C60,C62,C65,C68,C69,C7,C70,C75,C77,C79,C83,C86,C9,D1,D2,D4,D6,D9
lof_cds	Chr3	9574107	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	96	A25,A3,A4,A5,A8,A9,B1,B101,B102,B107,B11,B113,B12,B120,B121,B122,B123,B126,B127,B13,B130,B131,B134,B15,B16,B19,B21,B22,B24,B26,B3,B35,B36,B38,B39,B41,B44,B46,B47,B48,B50,B53,B54,B55,B59,B62,B64,B65,B66,B68,B70,B73,B75,B79,B82,B87,B89,B94,B97,C14,C15,C16,C24,C25,C26,C29,C3,C31,C32,C35,C39,C42,C46,C47,C48,C50,C53,C54,C57,C60,C62,C65,C68,C7,C70,C75,C77,C79,C83,C86,C9,D1,D2,D4,D6,D9
lof_cds	Chr3	9574124	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	19	A3,B101,B12,B13,B134,B16,B54,B66,B68,B70,B82,B97,C15,C50,C77,C79,C9,D2,D9
typical_cds_rare	Chr3	9574141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B75
lof_cds	Chr3	9574259	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B51,B93
typical_cds_rare	Chr3	9574259	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B51,B93
typical_cds_rare	Chr3	9574274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	D10
typical_cds_rare	Chr3	9574275	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B51,B93
typical_cds_rare	Chr3	9574368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B27
typical_cds_rare	Chr3	9574385	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	A3
typical_cds_rare	Chr3	9574420	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	A22,C27,C82,D7
typical_cds_rare	Chr3	9574430	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B41,C10,C74
lof_cds	Chr3	9574432	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	9	A21,B11,B113,B42,B43,B51,B93,C27,C72
lof_cds	Chr3	9574436	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	19	A3,B101,B12,B13,B134,B16,B35,B54,B66,B70,B82,B97,C15,C50,C77,C79,C9,D2,D9
lof_cds	Chr3	9574438	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	19	A3,B101,B12,B13,B134,B16,B35,B54,B66,B70,B82,B97,C15,C50,C77,C79,C9,D2,D9
typical_cds_rare	Chr3	9574451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	C31,C45
typical_cds_rare	Chr3	9574454	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B27
typical_cds_rare	Chr3	9574468	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	2	B75,B85
typical_cds_rare	Chr3	9574535	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	5	A25,C32,C48,C68,C71
typical_cds_rare	Chr3	9574574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	C44
typical_cds_rare	Chr3	9574616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	B98
lof_cds	Chr3	9574680	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	20	A3,B101,B12,B13,B134,B16,B35,B54,B66,B68,B70,B82,B97,C15,C50,C77,C79,C9,D2,D9
typical_cds_rare	Chr3	9574774	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	4	A25,C32,C48,C68
typical_cds_rare	Chr3	9574835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	1	C29
typical_cds_rare	Chr3	9574864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	3	B75,C31,C45
lof_cds	Chr3	9574879	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017436	SmilChr03G000835	131017436	rna-XM_057946183.1	20	A3,B101,B12,B13,B134,B16,B35,B54,B66,B68,B70,B82,B97,C15,C50,C77,C79,C9,D2,D9