source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	9579456	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	B2,C43,C52,C71
typical_cds_rare	Chr3	9579456	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	B2,C43,C52,C71
typical_cds_rare	Chr3	9579462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B17,B68,C78
typical_cds_rare	Chr3	9579620	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	C60
typical_cds_rare	Chr3	9579627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A20,B76,B83,C19,C27
typical_cds_rare	Chr3	9579630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B132
typical_cds_rare	Chr3	9579634	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B38,B39,B53,C50,C6
typical_cds_rare	Chr3	9579650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A6,B108,B62,B75,B80
typical_cds_rare	Chr3	9579673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B118,B36,C30,C54,C7
typical_cds_rare	Chr3	9579715	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B140,C29
typical_cds_rare	Chr3	9579723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B23,C10
lof_cds	Chr3	9579880	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B107,C18
typical_cds_rare	Chr3	9579880	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B107,C18
typical_cds_rare	Chr3	9579882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B16,B34,C36,C38,C76
lof_cds	Chr3	9579891	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B136,B29,C32
typical_cds_rare	Chr3	9579891	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B136,B29,C32
lof_cds	Chr3	9579897	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	14	A14,B12,B139,B18,B31,B44,B55,B62,B63,B84,B90,B92,C17,C39
typical_cds_rare	Chr3	9579927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	D2
typical_cds_rare	Chr3	9579934	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	A18,B120,B87,C61
typical_cds_rare	Chr3	9579951	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B136,C12,C53
typical_cds_rare	Chr3	9580127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B122,C25,C61
typical_cds_rare	Chr3	9580241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B109,B35,B61,C45,C8
lof_cds	Chr3	9580244	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	C71
typical_cds_rare	Chr3	9580244	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	C71
typical_cds_rare	Chr3	9580271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B75,B78,C82
typical_cds_rare	Chr3	9580298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B139,B87
typical_cds_rare	Chr3	9580299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	A19,A22,B81
typical_cds_rare	Chr3	9580302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B11,D3
typical_cds_rare	Chr3	9580319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B63,B83,C32,C82,C85
typical_cds_rare	Chr3	9580326	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B2
lof_cds	Chr3	9580331	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A15,B121,B67,C19,C28
typical_cds_rare	Chr3	9580331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A15,B121,B67,C19,C28
typical_cds_rare	Chr3	9580336	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B110,B38,B63,B74,C76
typical_cds_rare	Chr3	9580337	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	B117,B38,B39,B43
typical_cds_rare	Chr3	9580650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	C53,C78,D2
typical_cds_rare	Chr3	9580664	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	A24,B94
typical_cds_rare	Chr3	9580693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B11
lof_cds	Chr3	9580714	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	C72
typical_cds_rare	Chr3	9580714	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	C72
typical_cds_rare	Chr3	9580749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A4,B22,B28,C32,C50
lof_cds	Chr3	9580754	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	38	A10,A2,A24,A3,A8,B1,B10,B104,B108,B129,B135,B17,B23,B28,B52,B53,B55,B63,B71,B76,B79,B83,B84,C13,C14,C15,C36,C39,C45,C49,C54,C55,C58,C6,C61,C68,C76,D3
typical_cds_rare	Chr3	9580756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	B33,B83,C28,C42
lof_cds	Chr3	9580772	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	C11,C29
typical_cds_rare	Chr3	9580772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	C11,C29
typical_cds_rare	Chr3	9580777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A6,B104,B105,B95,D10
typical_cds_rare	Chr3	9580805	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	B44,B51,B66,C69
typical_cds_rare	Chr3	9580898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	C26
typical_cds_rare	Chr3	9580902	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B32
typical_cds_rare	Chr3	9580905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B134,B44,C29
typical_cds_rare	Chr3	9580953	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B44,C29
lof_cds	Chr3	9580984	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B110,B45,B6
typical_cds_rare	Chr3	9580984	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B110,B45,B6
typical_cds_rare	Chr3	9581126	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	D9
typical_cds_rare	Chr3	9581178	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B66,C67,C76
typical_cds_rare	Chr3	9581221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B130,B79,C61
typical_cds_rare	Chr3	9581244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	D4
lof_cds	Chr3	9581294	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B11
typical_cds_rare	Chr3	9581294	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B11
typical_cds_rare	Chr3	9581306	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	B14,B15,C50
typical_cds_rare	Chr3	9581323	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B2,B94
typical_cds_rare	Chr3	9581324	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B17,B26
typical_cds_rare	Chr3	9581331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B133,B15,B22,B62,C8
lof_cds	Chr3	9581334	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	C42,C53,C60
typical_cds_rare	Chr3	9581334	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	C42,C53,C60
typical_cds_rare	Chr3	9581346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	C18,C4,C41,C81
typical_cds_rare	Chr3	9581414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	B33,B92,C15,C17,C86
typical_cds_rare	Chr3	9581419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	3	A6,B75,C62
lof_cds	Chr3	9581427	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B34,B38
typical_cds_rare	Chr3	9581427	GTC	G	INDEL	2bp_deletion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B34,B38
typical_cds_rare	Chr3	9581451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A1,B128,B19,B99,D8
typical_cds_rare	Chr3	9581466	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A7,B43,B53,B80,D6
typical_cds_rare	Chr3	9581472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	4	C28,C44,C63,D2
lof_cds	Chr3	9581478	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	117	A10,A16,A19,A21,A6,A7,A9,B1,B10,B100,B105,B111,B115,B117,B118,B12,B120,B123,B126,B129,B13,B130,B131,B133,B134,B136,B14,B140,B16,B20,B21,B23,B24,B26,B27,B29,B3,B30,B33,B36,B38,B39,B4,B41,B42,B43,B45,B47,B49,B5,B52,B54,B56,B58,B6,B60,B64,B65,B69,B70,B71,B72,B73,B74,B75,B76,B78,B83,B84,B86,B91,B93,B95,B96,B97,C1,C15,C16,C17,C18,C2,C26,C3,C30,C32,C38,C39,C42,C45,C49,C52,C54,C56,C59,C60,C65,C66,C68,C7,C71,C72,C73,C74,C75,C77,C79,C80,C82,C83,C85,C87,D10,D4,D5,D6,D7,D9
typical_cds_rare	Chr3	9581485	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B44
lof_cds	Chr3	9581507	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B52
typical_cds_rare	Chr3	9581507	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	1	B52
typical_cds_rare	Chr3	9581591	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	2	B47,C87
lof_cds	Chr3	9581594	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A16,B81,C49,C55,D11
typical_cds_rare	Chr3	9581594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018281	SmilChr03G000836	131018281	rna-XM_057947006.1	5	A16,B81,C49,C55,D11