source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	9617773	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	37	A13,A14,A19,A3,A5,B112,B127,B128,B135,B17,B18,B37,B48,B63,B68,B71,B83,B89,B90,B92,B95,B97,B99,C15,C22,C23,C37,C56,C59,C62,C63,C68,C73,C78,C8,C85,C9
lof_cds	Chr3	9617775	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	37	A13,A14,A19,A3,A5,B112,B127,B128,B132,B135,B17,B18,B37,B63,B68,B71,B83,B89,B90,B92,B95,B97,B99,C15,C22,C23,C37,C56,C59,C62,C63,C68,C73,C78,C8,C85,C9
typical_cds_rare	Chr3	9617786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C44
lof_cds	Chr3	9617791	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A23,C65
typical_cds_rare	Chr3	9617791	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A23,C65
lof_cds	Chr3	9617843	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C23
typical_cds_rare	Chr3	9617843	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C23
lof_cds	Chr3	9617862	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	24	A11,A15,A3,B108,B109,B111,B120,B128,B138,B33,B41,B52,B53,B78,B80,B99,C17,C36,C44,C55,C57,C58,C75,D9
lof_cds	Chr3	9617867	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	131	A13,A14,A15,A18,A19,A2,A22,A23,A4,A5,A7,B1,B10,B100,B101,B104,B105,B106,B108,B109,B11,B111,B112,B117,B12,B120,B121,B126,B128,B13,B131,B132,B134,B16,B17,B18,B20,B24,B27,B28,B29,B31,B37,B39,B4,B40,B41,B43,B46,B47,B5,B50,B51,B53,B6,B61,B62,B63,B67,B69,B7,B74,B75,B76,B77,B78,B80,B82,B83,B85,B86,B94,B95,B97,B98,B99,C1,C10,C13,C15,C17,C19,C2,C20,C22,C26,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C42,C44,C47,C48,C5,C50,C53,C59,C6,C60,C61,C63,C65,C67,C68,C7,C71,C73,C75,C76,C77,C78,C79,C81,C82,C83,C86,C87,C9,D1,D10,D2,D5,D7,D9
typical_cds_rare	Chr3	9617904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A16,C56
typical_cds_rare	Chr3	9617920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B137,B41,C47,C77
lof_cds	Chr3	9617931	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	77	A19,A22,A23,A24,A4,A5,A8,B100,B104,B11,B111,B112,B115,B117,B12,B122,B124,B128,B135,B136,B140,B15,B18,B20,B28,B31,B37,B43,B44,B46,B47,B49,B50,B51,B58,B62,B64,B66,B67,B69,B71,B72,B82,B84,B86,B88,B93,B98,B99,C15,C18,C20,C22,C30,C31,C34,C39,C44,C48,C5,C50,C54,C56,C59,C61,C62,C63,C64,C65,C66,C71,C76,C8,C83,C9,D1,D9
lof_cds	Chr3	9617938	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	74	A19,A22,A23,A24,A4,A5,A8,B100,B104,B11,B111,B112,B115,B117,B12,B122,B124,B128,B135,B136,B140,B15,B18,B20,B31,B37,B43,B44,B47,B49,B50,B51,B58,B62,B64,B66,B67,B69,B71,B72,B82,B84,B86,B93,B98,B99,C15,C18,C20,C22,C31,C34,C39,C44,C48,C5,C50,C51,C54,C56,C59,C61,C62,C63,C64,C65,C66,C71,C76,C8,C83,C9,D1,D9
typical_cds_rare	Chr3	9617962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B7,C66,C78,D2
lof_cds	Chr3	9617968	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	51	A1,A10,A14,A18,A19,A3,B122,B126,B128,B132,B134,B17,B23,B29,B38,B39,B40,B66,B67,B68,B70,B71,B72,B75,B80,B87,B88,B93,B96,C13,C18,C19,C2,C30,C33,C36,C37,C38,C49,C51,C53,C59,C61,C62,C67,C69,C73,C74,C81,C85,D8
typical_cds_rare	Chr3	9617997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B29,C60
lof_cds	Chr3	9618014	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	9	A24,B134,B140,B25,B37,B5,C15,C16,C9
lof_cds	Chr3	9618016	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	9	A24,B134,B140,B25,B37,B5,C15,C16,C9
typical_cds_rare	Chr3	9618019	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B137,B17
lof_cds	Chr3	9618030	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	21	A10,A14,B17,B29,B31,B38,B39,B67,B72,B90,B96,C1,C13,C18,C3,C33,C37,C51,C61,C67,C69
typical_cds_rare	Chr3	9618036	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B42,B97,C53,C77
lof_cds	Chr3	9618065	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	18	A10,A15,A16,A25,B130,B137,B16,B18,B26,B72,B74,C23,C39,C40,C46,C87,D7,D8
typical_cds_rare	Chr3	9618069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B15,B64,B9,C66,D10
typical_cds_rare	Chr3	9618092	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B18,B34,B86,C13
typical_cds_rare	Chr3	9618113	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C71
typical_cds_rare	Chr3	9618124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B29,C60
lof_cds	Chr3	9618139	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	78	A2,A22,A3,A4,A7,A8,A9,B111,B112,B113,B117,B118,B12,B120,B124,B127,B131,B133,B134,B135,B136,B137,B14,B21,B29,B3,B38,B39,B4,B40,B41,B42,B47,B49,B50,B51,B53,B54,B6,B60,B65,B66,B67,B69,B71,B77,B8,B80,B81,B82,B86,B89,B9,B93,C19,C22,C26,C28,C3,C30,C31,C34,C38,C42,C44,C47,C55,C56,C63,C65,C69,C76,C77,C82,C86,C87,D1,D5
typical_cds_rare	Chr3	9618198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	A21,B105,B41
lof_cds	Chr3	9618201	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	9	B137,B25,B84,B88,C55,C61,C65,D11,D5
typical_cds_rare	Chr3	9618203	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	A21,B102,B20,B41
typical_cds_rare	Chr3	9618242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B38,C77
typical_cds_rare	Chr3	9618268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B41
lof_cds	Chr3	9618277	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B59,B74,C14,C21,D11
typical_cds_rare	Chr3	9618277	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B59,B74,C14,C21,D11
lof_cds	Chr3	9618290	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B59,B74,C14,C21,D11
typical_cds_rare	Chr3	9618290	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B59,B74,C14,C21,D11
typical_cds_rare	Chr3	9618298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B40
typical_cds_rare	Chr3	9618299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B105,C28
typical_cds_rare	Chr3	9618318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A20,B139,B20,B6,B87
typical_cds_rare	Chr3	9618346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B24
lof_cds	Chr3	9618348	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C50,D1
typical_cds_rare	Chr3	9618348	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C50,D1
lof_cds	Chr3	9618353	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	10	B24,B44,B78,B83,B90,C2,C27,C67,C68,C85
lof_cds	Chr3	9618355	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B78,B90
typical_cds_rare	Chr3	9618355	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B78,B90
typical_cds_rare	Chr3	9618378	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B17,B78
typical_cds_rare	Chr3	9618380	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B123,B93,C53
lof_cds	Chr3	9618385	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	C13,C4,C65
typical_cds_rare	Chr3	9618385	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	C13,C4,C65
lof_cds	Chr3	9618390	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	7	A15,B40,C13,C4,C56,C65,D1
typical_cds_rare	Chr3	9618405	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A3,B57,B88,B97,D2
typical_cds_rare	Chr3	9618406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	A13,B36,C29,D8
lof_cds	Chr3	9618427	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B24,C27
typical_cds_rare	Chr3	9618427	C	CAG	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B24,C27
lof_cds	Chr3	9618430	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B24,C27
typical_cds_rare	Chr3	9618430	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B24,C27
typical_cds_rare	Chr3	9618438	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B1,B68
typical_cds_rare	Chr3	9618440	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C25
lof_cds	Chr3	9618447	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B24,C27
typical_cds_rare	Chr3	9618447	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B24,C27
lof_cds	Chr3	9618460	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	15	A23,B122,B124,B140,B30,B35,B58,B68,B9,C18,C28,C46,C51,C66,C85
lof_cds	Chr3	9618461	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	15	B122,B136,B140,B2,B61,B64,B84,B91,C16,C18,C46,C51,C54,C61,C62
typical_cds_rare	Chr3	9618489	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C65,C71
typical_cds_rare	Chr3	9618496	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A18,B1,B126,B35,B68
typical_cds_rare	Chr3	9618521	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	A25,B106,B36
typical_cds_rare	Chr3	9618526	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B24,B60,B79,C26,C50
typical_cds_rare	Chr3	9618561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B38,B63,B72,B83
typical_cds_rare	Chr3	9618577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B50
lof_cds	Chr3	9618580	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	13	A10,A16,A25,A9,B107,B121,B130,B50,B65,B73,C29,C46,C5
typical_cds_rare	Chr3	9618594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B22,B38,C1,C13,C42
typical_cds_rare	Chr3	9618604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B14
typical_cds_rare	Chr3	9618616	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B118,B40,C72
typical_cds_rare	Chr3	9618673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B120,D10
typical_cds_rare	Chr3	9618747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	A22,C27,C82,D7
typical_cds_rare	Chr3	9618753	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	A5,B123,B36,B68
typical_cds_rare	Chr3	9618789	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B29,C60
lof_cds	Chr3	9618797	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B105,C29
typical_cds_rare	Chr3	9618797	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B105,C29
typical_cds_rare	Chr3	9618808	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C14
typical_cds_rare	Chr3	9618810	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A6,B100,B104,B76,C28
typical_cds_rare	Chr3	9618814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B111,B94
typical_cds_rare	Chr3	9618830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B18,B4,B74
typical_cds_rare	Chr3	9618831	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B105,B62,B79,C70
lof_cds	Chr3	9618855	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B34,D6,D7
typical_cds_rare	Chr3	9618855	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B34,D6,D7
lof_cds	Chr3	9618858	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	7	A11,A2,B105,B74,C14,C29,C58
typical_cds_rare	Chr3	9618879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	A20
lof_cds	Chr3	9618888	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B120
typical_cds_rare	Chr3	9618888	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B120
typical_cds_rare	Chr3	9618897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C28
typical_cds_rare	Chr3	9618900	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B29
lof_cds	Chr3	9618945	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	52	A18,A21,A8,B101,B12,B127,B131,B15,B19,B27,B28,B3,B36,B37,B42,B44,B45,B47,B5,B50,B51,B52,B55,B56,B60,B65,B69,B73,B88,B93,B95,B96,C1,C23,C29,C34,C40,C43,C46,C47,C50,C52,C53,C54,C56,C65,C70,C79,C86,D1,D3,D6
typical_cds_rare	Chr3	9618952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B105,C32,C48,C68,D10
typical_cds_rare	Chr3	9618988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C29
typical_cds_rare	Chr3	9619011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C21,D11
lof_cds	Chr3	9619027	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B55,C31,C83
typical_cds_rare	Chr3	9619027	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B55,C31,C83
lof_cds	Chr3	9619038	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	A23
typical_cds_rare	Chr3	9619038	C	CCG	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	A23
lof_cds	Chr3	9619039	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A23,B58
typical_cds_rare	Chr3	9619039	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A23,B58
typical_cds_rare	Chr3	9619072	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B88
typical_cds_rare	Chr3	9619093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B93,C53
typical_cds_rare	Chr3	9619103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A21,B37
typical_cds_rare	Chr3	9619112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	D9
typical_cds_rare	Chr3	9619118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B93,D11
lof_cds	Chr3	9619121	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C11,C78
typical_cds_rare	Chr3	9619121	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C11,C78
typical_cds_rare	Chr3	9619166	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C11,C78
typical_cds_rare	Chr3	9619173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B27
lof_cds	Chr3	9619205	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	12	A24,B139,B15,B19,B45,B60,B92,C15,C43,C46,C52,C70
typical_cds_rare	Chr3	9619208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B46,C45,C63
lof_cds	Chr3	9619215	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	8	A24,B139,B19,B45,B60,C43,C52,C70
typical_cds_rare	Chr3	9619237	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	A6
lof_cds	Chr3	9619239	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	6	B20,B59,B74,C14,C58,C73
typical_cds_rare	Chr3	9619272	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B129,B132,C87
typical_cds_rare	Chr3	9619274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A20,B139,B20,B6,B87
lof_cds	Chr3	9619300	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	19	A23,B102,B124,B129,B132,B140,B17,B30,B46,B53,B58,B7,B77,B91,C11,C18,C78,C8,C87
lof_cds	Chr3	9619303	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	19	A23,B102,B124,B129,B132,B140,B17,B30,B46,B53,B58,B7,B77,B91,C11,C18,C78,C8,C87
lof_cds	Chr3	9619315	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	31	A10,A23,B1,B119,B122,B124,B136,B140,B15,B2,B30,B32,B58,B61,B64,B66,B84,B9,B91,C16,C18,C28,C4,C46,C51,C54,C64,C66,C8,C85,D10
lof_cds	Chr3	9619369	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B93,C53
typical_cds_rare	Chr3	9619369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B93,C53
typical_cds_rare	Chr3	9619372	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	A9,B59,C25
lof_cds	Chr3	9619379	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B23,C11,C50
typical_cds_rare	Chr3	9619379	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B23,C11,C50
lof_cds	Chr3	9619381	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B23,C11,C50
typical_cds_rare	Chr3	9619381	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B23,C11,C50
typical_cds_rare	Chr3	9619407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B118,B40,C72
lof_cds	Chr3	9619413	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B126
typical_cds_rare	Chr3	9619413	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B126
typical_cds_rare	Chr3	9619422	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	A9,C19,C60
typical_cds_rare	Chr3	9619451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C29
typical_cds_rare	Chr3	9619584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B71,C38,C78,D9
typical_cds_rare	Chr3	9619593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B129
typical_cds_rare	Chr3	9619602	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B130,B81,B96,C2
typical_cds_rare	Chr3	9619604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A19,B127,C23,C24,C64
typical_cds_rare	Chr3	9619614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	A3,B69,C67
typical_cds_rare	Chr3	9619616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A3,C67
lof_cds	Chr3	9619629	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A3,C67
typical_cds_rare	Chr3	9619629	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A3,C67
lof_cds	Chr3	9619631	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	13	A3,B108,B131,B3,B44,B65,C23,C47,C53,C6,C67,C8,C87
lof_cds	Chr3	9619633	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	11	B108,B131,B3,B44,B65,C23,C47,C53,C6,C8,C87
lof_cds	Chr3	9619634	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A3,C67
typical_cds_rare	Chr3	9619634	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A3,C67
lof_cds	Chr3	9619635	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	50	A18,A24,A25,A7,A8,A9,B104,B107,B114,B115,B121,B129,B130,B131,B14,B47,B49,B50,B53,B55,B59,B6,B60,B62,B65,B68,B71,B73,B79,B81,B82,B84,B96,C14,C2,C20,C31,C34,C38,C39,C46,C48,C52,C68,C70,C78,C8,D2,D8,D9
lof_cds	Chr3	9619636	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	13	B108,B117,B131,B3,B39,B44,B65,C23,C47,C53,C6,C8,C87
typical_cds_rare	Chr3	9619641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B130,B81,B96,C2
typical_cds_rare	Chr3	9619643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B3,B44,C47,C53
typical_cds_rare	Chr3	9619667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B129
typical_cds_rare	Chr3	9619696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	C32,C48,C68
lof_cds	Chr3	9619723	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A19,B103
typical_cds_rare	Chr3	9619723	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A19,B103
lof_cds	Chr3	9619757	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	7	A21,B46,B52,C10,C55,C59,C61
lof_cds	Chr3	9619765	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	56	A1,A13,A16,A20,A21,A6,B1,B102,B11,B113,B114,B120,B123,B125,B129,B17,B28,B32,B42,B43,B47,B48,B58,B62,B63,B68,B69,B7,B72,B79,B82,B92,B95,B96,B97,C12,C16,C17,C20,C28,C29,C3,C34,C39,C41,C43,C45,C48,C5,C51,C56,C78,C79,C86,D2,D8
lof_cds	Chr3	9619773	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	56	A1,A13,A16,A20,A21,A6,B1,B102,B11,B113,B114,B120,B123,B125,B129,B17,B28,B32,B42,B43,B47,B48,B58,B62,B63,B68,B69,B7,B72,B79,B82,B92,B95,B96,B97,C12,C16,C17,C20,C28,C29,C3,C34,C39,C41,C43,C45,C48,C5,C51,C56,C78,C79,C86,D2,D8
typical_cds_rare	Chr3	9619787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	B32,B42,C28,C29,C45
typical_cds_rare	Chr3	9619799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	A15,B56,B84
typical_cds_rare	Chr3	9619811	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	A15,B56,B84,C60
lof_cds	Chr3	9619871	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B77,C26
typical_cds_rare	Chr3	9619871	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B77,C26
lof_cds	Chr3	9619887	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	22	A16,A25,A8,A9,B11,B115,B19,B34,B50,B53,B6,B60,B64,C14,C16,C3,C35,C39,C49,C52,C68,C70
typical_cds_rare	Chr3	9619889	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A21,B17,B96,C24,D7
lof_cds	Chr3	9619898	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	14	A16,A25,A8,A9,B11,B115,B34,B50,B60,B64,C3,C35,C49,C68
lof_cds	Chr3	9619903	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	14	A16,A25,A8,A9,B11,B115,B34,B50,B60,B64,C3,C35,C49,C68
typical_cds_rare	Chr3	9619917	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	D11
typical_cds_rare	Chr3	9619946	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C25,C71
typical_cds_rare	Chr3	9619956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B124,B51,C26
lof_cds	Chr3	9619961	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	8	A21,A3,B17,B96,C21,C24,C3,C64
typical_cds_rare	Chr3	9619985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B29,C60
typical_cds_rare	Chr3	9619987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	A15,B31
typical_cds_rare	Chr3	9620016	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B133
lof_cds	Chr3	9620063	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B133
typical_cds_rare	Chr3	9620063	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B133
lof_cds	Chr3	9620064	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C22,C61
typical_cds_rare	Chr3	9620064	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C22,C61
typical_cds_rare	Chr3	9620073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	B133
lof_cds	Chr3	9620075	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B133,C72
typical_cds_rare	Chr3	9620075	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B133,C72
typical_cds_rare	Chr3	9620125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	B85,C28
typical_cds_rare	Chr3	9620130	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	1	C22
typical_cds_rare	Chr3	9620156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	3	B36,C22,C72
typical_cds_rare	Chr3	9620210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	2	C30,D9
lof_cds	Chr3	9620235	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	36	A13,A16,A22,A25,A4,A7,B12,B123,B13,B18,B22,B23,B28,B31,B34,B49,B50,B69,B71,B74,B77,B8,B83,B86,B88,C15,C17,C19,C22,C3,C32,C38,C47,C5,C57,C73
lof_cds	Chr3	9620257	T	TC	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	32	B100,B104,B106,B111,B117,B129,B137,B16,B18,B29,B38,B42,B43,B5,B65,B67,B68,B69,B97,C36,C4,C52,C6,C61,C63,C65,C67,C69,C75,C82,C87,D5
lof_cds	Chr3	9620282	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	42	A13,A16,B100,B104,B106,B111,B117,B129,B137,B16,B18,B29,B31,B38,B42,B43,B5,B65,B67,B68,B69,B78,B86,B97,C17,C19,C25,C30,C36,C4,C5,C52,C6,C61,C63,C65,C67,C69,C75,C82,C87,D5
typical_cds_rare	Chr3	9620299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	5	A21,B16,B40,B54,C61
typical_cds_rare	Chr3	9620323	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017440	SmilChr03G000843	131017440	rna-XM_057946188.1	4	B120,B53,C47,C57