source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	9837511	T	TTA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	45	A13,A18,B106,B112,B123,B133,B137,B14,B20,B28,B29,B3,B30,B31,B37,B47,B52,B56,B6,B61,B72,B8,B84,B86,B95,B96,B97,B98,C11,C12,C19,C21,C30,C33,C36,C37,C51,C56,C61,C67,C69,C80,C83,C84,D5
lof_cds	Chr3	9837532	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A5,B1,B117,C6,D1
typical_cds_rare	Chr3	9837532	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A5,B1,B117,C6,D1
lof_cds	Chr3	9837535	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A5,B1,B117,C6,D1
typical_cds_rare	Chr3	9837535	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A5,B1,B117,C6,D1
typical_cds_rare	Chr3	9837548	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A5,B1,B117,C6,D1
typical_cds_rare	Chr3	9837592	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B103,B119
typical_cds_rare	Chr3	9837595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B103,B119
lof_cds	Chr3	9837631	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	21	A21,B106,B120,B31,B40,B41,B42,B43,B53,B62,B71,B79,B99,C28,C47,C57,C61,C70,C72,C87,D11
typical_cds_rare	Chr3	9837639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	B120,B41,B53,C47,C57
typical_cds_rare	Chr3	9837714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	3	B105,C25,C41
typical_cds_rare	Chr3	9837720	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B74,C14
typical_cds_rare	Chr3	9837751	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B39,C63
lof_cds	Chr3	9837755	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	A18,B33
typical_cds_rare	Chr3	9837755	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	A18,B33
typical_cds_rare	Chr3	9837762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	4	B53,B86,C47,C57
lof_cds	Chr3	9837768	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	6	B104,B31,B42,B46,B79,C87
typical_cds_rare	Chr3	9837784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B39,C63
lof_cds	Chr3	9837806	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	11	A18,A20,A22,B33,B90,B92,C24,C27,C73,C78,C85
lof_cds	Chr3	9837823	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	20	A4,A5,A8,B100,B101,B105,B11,B117,B131,B134,B21,B31,C26,C31,C35,C39,C63,C82,D1,D5
lof_cds	Chr3	9837826	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	20	A4,A5,A8,B100,B101,B105,B11,B117,B131,B134,B21,B31,C26,C31,C35,C39,C63,C82,D1,D5
lof_cds	Chr3	9837837	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	50	A13,A18,A20,A22,B106,B112,B133,B14,B20,B28,B3,B30,B31,B33,B37,B47,B52,B56,B6,B61,B72,B8,B84,B86,B90,B92,B95,B96,B97,B98,C11,C12,C21,C24,C27,C30,C33,C36,C37,C51,C56,C61,C67,C73,C78,C80,C83,C84,C85,D5
lof_cds	Chr3	9837885	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	C62
typical_cds_rare	Chr3	9837885	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	C62
lof_cds	Chr3	9837886	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A25,A9,B131,C26,C31
typical_cds_rare	Chr3	9837886	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A25,A9,B131,C26,C31
typical_cds_rare	Chr3	9837887	AC	*	INDEL	1bp_deletion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A25,A9,B131,C26,C31
lof_cds	Chr3	9837890	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	6	A25,A9,B131,C26,C31,C62
typical_cds_rare	Chr3	9837898	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	4	A24,B106,C7,C87
typical_cds_rare	Chr3	9838681	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	A18,B106
typical_cds_rare	Chr3	9838701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B104,B94
typical_cds_rare	Chr3	9838702	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	3	A5,B52,C54
typical_cds_rare	Chr3	9838708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	C65
typical_cds_rare	Chr3	9838723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	C71
lof_cds	Chr3	9838760	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B114
typical_cds_rare	Chr3	9838760	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B114
typical_cds_rare	Chr3	9838765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B74,C14
typical_cds_rare	Chr3	9838769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	4	A5,B52,B64,C54
typical_cds_rare	Chr3	9838784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	4	A5,B52,B64,C54
typical_cds_rare	Chr3	9838792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B99
typical_cds_rare	Chr3	9838817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B74,C14
typical_cds_rare	Chr3	9838838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B64,C54
typical_cds_rare	Chr3	9838841	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B23
typical_cds_rare	Chr3	9838845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	B21,B53,B57,C35,C63
typical_cds_rare	Chr3	9838878	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	B21,B53,B57,C35,C63
typical_cds_rare	Chr3	9838901	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	5	A5,B52,B64,B94,C54
typical_cds_rare	Chr3	9838905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B118
typical_cds_rare	Chr3	9838923	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B94
typical_cds_rare	Chr3	9838926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B115
typical_cds_rare	Chr3	9838936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	C25
typical_cds_rare	Chr3	9838952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	3	B93,C5,C53
typical_cds_rare	Chr3	9838996	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B26,B74
typical_cds_rare	Chr3	9839023	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B26,B74
typical_cds_rare	Chr3	9839088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B94
lof_cds	Chr3	9839091	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	17	A13,A8,B125,B2,B49,B82,B90,B92,B97,C33,C58,C61,C68,C8,C9,D10,D7
typical_cds_rare	Chr3	9839118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	4	B124,C2,C58,D7
lof_cds	Chr3	9839122	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	7	B1,B108,B42,B47,C37,C58,C76
lof_cds	Chr3	9839123	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	6	B1,B108,B42,B47,C37,C76
lof_cds	Chr3	9839124	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B2
typical_cds_rare	Chr3	9839124	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B2
typical_cds_rare	Chr3	9839127	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	3	B128,B78,C21
typical_cds_rare	Chr3	9839132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B2
typical_cds_rare	Chr3	9839137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	1	B2
typical_cds_rare	Chr3	9839157	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018291	SmilChr03G000863	131018291	rna-XM_057947017.1	2	B7,C17