source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	10112016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	5	A13,A24,B139,B60,C52
typical_cds_rare	Chr3	10112018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	C13
typical_cds_rare	Chr3	10112025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B83,B98
typical_cds_rare	Chr3	10112033	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B69
lof_cds	Chr3	10112049	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A22,B117,C15
typical_cds_rare	Chr3	10112049	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A22,B117,C15
lof_cds	Chr3	10112080	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A22,C35
typical_cds_rare	Chr3	10112080	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A22,C35
lof_cds	Chr3	10112083	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A22,C35
typical_cds_rare	Chr3	10112083	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A22,C35
lof_cds	Chr3	10112967	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	B82,B9,C26
typical_cds_rare	Chr3	10112967	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	B82,B9,C26
typical_cds_rare	Chr3	10112988	AG	*	INDEL	1bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B63,D2
typical_cds_rare	Chr3	10113007	TG	*	INDEL	1bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A14,B63,D2
lof_cds	Chr3	10113041	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	22	A16,A8,B101,B121,B134,B137,B138,B16,B31,B48,B59,B6,B66,B69,B70,B85,C15,C38,C50,C58,C79,D9
lof_cds	Chr3	10113048	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	45	A14,A25,A8,B1,B108,B109,B110,B114,B118,B121,B122,B124,B128,B130,B136,B140,B17,B23,B38,B40,B49,B50,B51,B55,B66,B73,B77,B80,B87,B91,C13,C15,C25,C27,C29,C35,C39,C41,C52,C60,C61,C62,C7,C81,C87
lof_cds	Chr3	10113053	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	38	A11,A14,A23,A25,A8,B1,B100,B114,B122,B124,B128,B130,B132,B136,B140,B17,B23,B26,B38,B50,B51,B55,B58,B71,B77,B91,C13,C15,C22,C29,C35,C39,C41,C52,C60,C61,C7,C87
typical_cds_rare	Chr3	10113074	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B89,D4
typical_cds_rare	Chr3	10113088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	4	B21,B50,B54,B60
lof_cds	Chr3	10113096	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	64	A11,A14,A19,A23,A25,A8,B1,B100,B108,B109,B110,B114,B121,B122,B124,B128,B130,B132,B136,B140,B16,B17,B23,B26,B46,B49,B50,B51,B55,B58,B66,B71,B73,B77,B79,B80,B85,B87,B9,B91,C12,C13,C15,C17,C22,C25,C26,C27,C29,C35,C38,C39,C41,C46,C51,C52,C6,C60,C61,C62,C63,C67,C7,C87
lof_cds	Chr3	10113106	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	13	A14,B139,B25,B60,B67,B81,B92,C25,C40,C45,D4,D6,D8
lof_cds	Chr3	10113181	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A1,B24,C37
typical_cds_rare	Chr3	10113181	GGC	G	INDEL	2bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A1,B24,C37
typical_cds_rare	Chr3	10113263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B100
lof_cds	Chr3	10113279	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	34	A25,A7,A9,B100,B102,B108,B129,B130,B134,B135,B22,B26,B41,B71,B73,B76,B83,B89,B94,B99,C10,C16,C23,C42,C48,C50,C52,C60,C67,C74,C77,C84,D4,D5
typical_cds_rare	Chr3	10113344	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	4	B24,C65,D11,D6
typical_cds_rare	Chr3	10113346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B104
typical_cds_rare	Chr3	10113387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B33,C65
lof_cds	Chr3	10113401	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B73,C17
typical_cds_rare	Chr3	10113401	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B73,C17
typical_cds_rare	Chr3	10113425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B99
lof_cds	Chr3	10113428	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	6	A1,B104,B82,B9,C22,C37
typical_cds_rare	Chr3	10113446	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A16,B73
typical_cds_rare	Chr3	10113456	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B33
typical_cds_rare	Chr3	10113464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	B73,C4,C75
typical_cds_rare	Chr3	10113472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B73,C17
lof_cds	Chr3	10113477	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B76
typical_cds_rare	Chr3	10113477	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B76
lof_cds	Chr3	10113481	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B76
typical_cds_rare	Chr3	10113481	TAG	T	INDEL	2bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	B76
typical_cds_rare	Chr3	10113531	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B16,B79
lof_cds	Chr3	10113535	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	27	A2,A23,A3,B11,B114,B120,B126,B13,B132,B26,B3,B39,B59,B84,B87,B89,C12,C14,C15,C29,C49,C5,C52,C59,C60,C77,D5
typical_cds_rare	Chr3	10113542	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A23,B43
lof_cds	Chr3	10113552	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	5	A19,B14,B90,C35,D9
typical_cds_rare	Chr3	10113552	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	5	A19,B14,B90,C35,D9
typical_cds_rare	Chr3	10113562	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B36,B74
lof_cds	Chr3	10113566	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	10	A18,B123,B63,B89,C1,C3,C43,C86,D1,D4
typical_cds_rare	Chr3	10113577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A24,B90,B92
typical_cds_rare	Chr3	10113579	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	B97,C56,D8
typical_cds_rare	Chr3	10113581	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	5	B18,B88,C5,C70,C75
typical_cds_rare	Chr3	10113596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	B44,C72
lof_cds	Chr3	10113679	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	76	A10,A13,A15,A24,A25,A7,B1,B10,B106,B108,B109,B110,B113,B118,B120,B126,B13,B131,B136,B139,B15,B2,B24,B29,B3,B30,B31,B32,B35,B44,B47,B56,B58,B60,B61,B64,B69,B72,B73,B77,B8,B80,B82,B84,B86,B87,B9,B91,B96,B97,B99,C11,C16,C26,C27,C28,C33,C36,C4,C42,C44,C46,C47,C51,C52,C53,C54,C62,C66,C69,C71,C8,C81,C85,C86,D1
lof_cds	Chr3	10113724	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	C28,C51
typical_cds_rare	Chr3	10113724	CGA	C	INDEL	2bp_deletion	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	C28,C51
typical_cds_rare	Chr3	10113731	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	B16,B74,C79
lof_cds	Chr3	10113732	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	84	A14,A15,A16,A19,A2,A7,B10,B101,B104,B106,B109,B110,B111,B112,B117,B12,B120,B123,B125,B127,B128,B131,B138,B139,B16,B17,B18,B19,B26,B29,B36,B37,B4,B42,B43,B45,B51,B55,B59,B63,B74,B78,B82,B83,B85,B88,B90,B92,B93,B95,B97,C13,C17,C2,C20,C23,C25,C30,C38,C4,C40,C45,C5,C54,C56,C59,C65,C66,C7,C70,C73,C74,C75,C76,C77,C78,C79,C8,C82,C9,D1,D6,D7,D9
typical_cds_rare	Chr3	10113739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	B118,B61,C11
typical_cds_rare	Chr3	10113754	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A25,C57
typical_cds_rare	Chr3	10113761	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	4	B118,B61,C11,C42
typical_cds_rare	Chr3	10113765	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	1	D8
lof_cds	Chr3	10113778	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A5,C71
typical_cds_rare	Chr3	10113778	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	2	A5,C71
lof_cds	Chr3	10113804	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	11	A20,A9,B107,B55,B59,B65,B81,C3,C31,C83,D3
typical_cds_rare	Chr3	10113808	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017480	SmilChr03G000886	131017480	rna-XM_057946227.1	3	A16,A21,C55