source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	10320687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B57,B7,B88,C34
typical_cds_rare	Chr3	10320726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A19,A3,B124,B49,B79
typical_cds_rare	Chr3	10320730	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B129
typical_cds_rare	Chr3	10320764	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B57,B64,B7,B88,C34
typical_cds_rare	Chr3	10320767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B129
typical_cds_rare	Chr3	10320786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C73
typical_cds_rare	Chr3	10320806	AG	*	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	A20,A9,B107,B65
lof_cds	Chr3	10320824	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B2,B77,C87,D3,D6
typical_cds_rare	Chr3	10320824	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B2,B77,C87,D3,D6
typical_cds_rare	Chr3	10320881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B123,B78
typical_cds_rare	Chr3	10321045	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B57,B7,B88,C34
lof_cds	Chr3	10321057	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B65,C6,D4
typical_cds_rare	Chr3	10321057	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B65,C6,D4
typical_cds_rare	Chr3	10321085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B69
lof_cds	Chr3	10321161	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B78
typical_cds_rare	Chr3	10321161	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B78
typical_cds_rare	Chr3	10321192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B6,C71
lof_cds	Chr3	10321237	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B123,B89,C16,C3,D4
typical_cds_rare	Chr3	10321237	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B123,B89,C16,C3,D4
lof_cds	Chr3	10321356	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B135,B42,B43,C72,C73
typical_cds_rare	Chr3	10321356	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B135,B42,B43,C72,C73
lof_cds	Chr3	10321377	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A21,B11,B22,B40,B98
typical_cds_rare	Chr3	10321377	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A21,B11,B22,B40,B98
lof_cds	Chr3	10321387	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B93
typical_cds_rare	Chr3	10321387	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B93
typical_cds_rare	Chr3	10321496	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B132,C22
typical_cds_rare	Chr3	10321516	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B6,C71
lof_cds	Chr3	10321611	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	19	A13,B10,B106,B29,B30,B31,B49,B6,B61,B72,B8,B86,B97,C11,C33,C36,C51,C69,C71
lof_cds	Chr3	10321619	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A20,A9,B107,B65,D3
typical_cds_rare	Chr3	10321619	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A20,A9,B107,B65,D3
typical_cds_rare	Chr3	10322084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	C57,C87
typical_cds_rare	Chr3	10322151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B24,B48
typical_cds_rare	Chr3	10322166	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B127,D9
typical_cds_rare	Chr3	10322208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	A21,B11,B40,B98
lof_cds	Chr3	10322255	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	6	B103,B47,C49,C55,C56,C57
lof_cds	Chr3	10322259	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B138,B77,B85,C38
typical_cds_rare	Chr3	10322259	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B138,B77,B85,C38
typical_cds_rare	Chr3	10322299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B129
typical_cds_rare	Chr3	10322304	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A20,A9,B107,B65,D3
typical_cds_rare	Chr3	10322347	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C66
typical_cds_rare	Chr3	10322361	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B134,B52,C82
lof_cds	Chr3	10322367	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	9	A25,B11,B14,B16,B17,B24,B3,B30,C30
lof_cds	Chr3	10322388	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B104,C54
typical_cds_rare	Chr3	10322388	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B104,C54
typical_cds_rare	Chr3	10322397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B104,C54
lof_cds	Chr3	10322416	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	71	A13,A20,A21,A9,B1,B10,B102,B104,B106,B107,B108,B114,B12,B120,B122,B123,B126,B135,B20,B22,B23,B25,B29,B30,B31,B33,B42,B43,B46,B49,B55,B57,B61,B65,B67,B68,B7,B72,B73,B77,B8,B86,B88,B89,B9,B93,B97,C11,C16,C22,C23,C26,C3,C33,C34,C36,C39,C41,C51,C53,C60,C65,C69,C7,C72,C73,C84,D10,D11,D3,D4
typical_cds_rare	Chr3	10322429	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B128,B138,B24,B77,B85
typical_cds_rare	Chr3	10322431	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A20,A9,B107,B65,D3
typical_cds_rare	Chr3	10322473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	D11
lof_cds	Chr3	10322474	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	11	A18,A4,B105,B133,B134,B139,B52,B69,B87,C38,C82
typical_cds_rare	Chr3	10322488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B16,B74,C79
lof_cds	Chr3	10322593	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	16	A13,B10,B106,B29,B30,B31,B49,B61,B72,B86,B97,C11,C33,C36,C51,C69
typical_cds_rare	Chr3	10322662	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	A13,A24,B60,C52
typical_cds_rare	Chr3	10322667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B123,B89,C16
lof_cds	Chr3	10322713	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	6	A19,A3,B121,B124,B49,B79
lof_cds	Chr3	10322773	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	37	A11,A18,A24,A4,A8,A9,B100,B105,B113,B129,B132,B133,B139,B28,B39,B46,B52,B69,B71,B73,B76,B87,C1,C12,C14,C15,C25,C27,C38,C43,C52,C59,C61,C82,C86,D5,D7
lof_cds	Chr3	10322808	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	9	B115,B2,B41,B53,C37,C57,C77,C87,D11
lof_cds	Chr3	10322816	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	8	B115,B2,B41,B53,C37,C57,C77,D11
typical_cds_rare	Chr3	10322820	AC	*	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B2,C37,C47,C87,D11
typical_cds_rare	Chr3	10322907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C22
lof_cds	Chr3	10322909	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B12
typical_cds_rare	Chr3	10322909	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B12
typical_cds_rare	Chr3	10322933	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B139,B69,C38
typical_cds_rare	Chr3	10322963	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B57,B7,B88,C34
typical_cds_rare	Chr3	10323039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B16,B74,C79
typical_cds_rare	Chr3	10323061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B16,C79
typical_cds_rare	Chr3	10323115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B16,C79
typical_cds_rare	Chr3	10323160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B128,B138,B77,B85,C38
typical_cds_rare	Chr3	10323168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	A19,A3,B124,B49,B79
lof_cds	Chr3	10323218	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	A19
typical_cds_rare	Chr3	10323218	TTA	T	INDEL	2bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	A19
lof_cds	Chr3	10323237	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B73,B77,B9,C22,C26
typical_cds_rare	Chr3	10323237	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	5	B73,B77,B9,C22,C26
typical_cds_rare	Chr3	10323265	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B81,C5
typical_cds_rare	Chr3	10323369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B129
lof_cds	Chr3	10323450	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	A20
typical_cds_rare	Chr3	10323450	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	A20
lof_cds	Chr3	10323459	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	21	B1,B106,B107,B114,B12,B120,B122,B126,B22,B23,B25,B36,B55,B68,B75,B99,C39,C41,C7,C81,C84
typical_cds_rare	Chr3	10323480	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B12,D2
typical_cds_rare	Chr3	10323498	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B16,B74,C79
lof_cds	Chr3	10323563	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	A24,B28
typical_cds_rare	Chr3	10323563	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	A24,B28
typical_cds_rare	Chr3	10323567	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	2	B6,C71
typical_cds_rare	Chr3	10323602	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B12,B68,C87,D2
lof_cds	Chr3	10323606	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	6	B102,B123,B89,C16,C3,D4
typical_cds_rare	Chr3	10323613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B12,B68,D2
typical_cds_rare	Chr3	10323643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B77,B9,C22,C26
typical_cds_rare	Chr3	10323667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B65,C20,C6,D4
lof_cds	Chr3	10323696	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	27	A25,B100,B112,B121,B130,B133,B137,B14,B20,B21,B28,B3,B47,B50,B56,B84,B95,B96,C12,C21,C29,C35,C56,C75,C80,C84,D5
typical_cds_rare	Chr3	10323702	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	3	B16,B74,C79
typical_cds_rare	Chr3	10323703	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B65,C20,C6,D4
typical_cds_rare	Chr3	10323726	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C22
typical_cds_rare	Chr3	10323728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	4	B65,C20,C6,D4
typical_cds_rare	Chr3	10323742	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C14
typical_cds_rare	Chr3	10323749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	B104
lof_cds	Chr3	10323757	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C13
typical_cds_rare	Chr3	10323757	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	1	C13
lof_cds	Chr3	10323786	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	9	A1,A14,B1,B27,B51,B58,B7,C17,C41
lof_cds	Chr3	10323794	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131017496	SmilChr03G000901	131017496	rna-XM_057946251.1	70	A1,A10,A13,A14,A21,A23,B1,B102,B104,B108,B109,B119,B122,B123,B124,B136,B140,B15,B22,B23,B27,B29,B30,B31,B32,B33,B49,B56,B57,B58,B61,B64,B66,B7,B71,B72,B77,B8,B80,B84,B86,B87,B89,B9,B91,B96,B97,C11,C16,C17,C18,C22,C26,C28,C3,C33,C34,C36,C4,C41,C51,C54,C62,C63,C64,C66,C69,C8,C85,D4