source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	10604480	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	13	A1,A14,B119,B122,B136,B140,B64,C18,C46,C51,C60,C66,C82
lof_cds	Chr3	10604593	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	B27,B62,B79,B94,C28
typical_cds_rare	Chr3	10604593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	B27,B62,B79,B94,C28
lof_cds	Chr3	10604598	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	99	A1,A11,A15,A19,A2,A20,A23,A24,A25,A5,A6,A7,A8,A9,B102,B106,B11,B110,B112,B118,B123,B127,B130,B132,B136,B137,B139,B140,B16,B17,B18,B19,B26,B27,B28,B34,B35,B38,B39,B40,B42,B44,B45,B5,B52,B53,B54,B55,B56,B58,B6,B65,B69,B71,B72,B76,B77,B78,B79,B84,B93,B96,C17,C18,C19,C20,C27,C28,C30,C31,C34,C39,C41,C42,C43,C44,C45,C49,C5,C53,C54,C57,C59,C60,C62,C65,C69,C71,C73,C79,C8,C80,C83,C85,C86,C87,C9,D3,D9
lof_cds	Chr3	10604601	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	86	A1,A13,A15,A18,B10,B101,B102,B104,B105,B106,B108,B109,B110,B112,B123,B125,B127,B129,B133,B135,B136,B137,B14,B140,B16,B17,B26,B27,B28,B29,B3,B30,B31,B34,B35,B47,B53,B56,B57,B59,B6,B61,B62,B66,B67,B72,B74,B79,B8,B80,B84,B86,B89,B90,B92,B95,B96,B97,B98,B99,C10,C11,C12,C16,C21,C28,C29,C3,C33,C36,C44,C45,C46,C51,C56,C62,C69,C73,C79,C8,C80,C81,C84,D11,D4,D5
lof_cds	Chr3	10604604	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	A1,B136,B140,B53,C44
typical_cds_rare	Chr3	10604604	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	A1,B136,B140,B53,C44
typical_cds_rare	Chr3	10604612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	A1,B136,B140,B53,C44
lof_cds	Chr3	10604917	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B16,B74,B89
typical_cds_rare	Chr3	10604917	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B16,B74,B89
typical_cds_rare	Chr3	10605072	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	B16,B74,B89,C79
typical_cds_rare	Chr3	10605076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	A18
typical_cds_rare	Chr3	10605332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	C8
lof_cds	Chr3	10605461	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	B106
typical_cds_rare	Chr3	10605461	T	TAG	INDEL	2bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	B106
lof_cds	Chr3	10605607	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	6	A9,B27,B62,B79,B94,C28
typical_cds_rare	Chr3	10605624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	A24,B122,B71
typical_cds_rare	Chr3	10605637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	C16,C22,C30
typical_cds_rare	Chr3	10605662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	A4,B140,B69,C38,C48
typical_cds_rare	Chr3	10605927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B102,C16,C49
lof_cds	Chr3	10605935	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B102,C16,C49
typical_cds_rare	Chr3	10605935	C	CTA	INDEL	2bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B102,C16,C49
typical_cds_rare	Chr3	10605957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B102,C16,C49
typical_cds_rare	Chr3	10605960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B102,C16,C49
typical_cds_rare	Chr3	10606331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	B103,B57,B90,C56,C84
typical_cds_rare	Chr3	10606343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	C2
typical_cds_rare	Chr3	10606345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	D11
lof_cds	Chr3	10606597	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	2	C10,C21
typical_cds_rare	Chr3	10606597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	2	C10,C21
lof_cds	Chr3	10606612	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	8	B104,B127,B34,B35,C10,C21,C29,C8
typical_cds_rare	Chr3	10606691	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	C44
typical_cds_rare	Chr3	10606777	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	C44
lof_cds	Chr3	10606806	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	B27,B67,B79,B94,B99
typical_cds_rare	Chr3	10606806	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	B27,B67,B79,B94,B99
typical_cds_rare	Chr3	10606815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	2	B129,B99
typical_cds_rare	Chr3	10606828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	B16,B74,B89,C79
typical_cds_rare	Chr3	10607118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	A2,A21,B15
lof_cds	Chr3	10607125	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B133,B135,C48
typical_cds_rare	Chr3	10607125	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B133,B135,C48
typical_cds_rare	Chr3	10607142	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	A2,A21,B108,B15
typical_cds_rare	Chr3	10607154	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	A2,A21,B108,B15
typical_cds_rare	Chr3	10607184	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	A16,A2,A21,B15,C49
typical_cds_rare	Chr3	10607251	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	B127
typical_cds_rare	Chr3	10607260	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	D11
typical_cds_rare	Chr3	10607267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	5	A16,A21,B119,B59,C49
lof_cds	Chr3	10607276	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	2	B119,B59
typical_cds_rare	Chr3	10607276	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	2	B119,B59
typical_cds_rare	Chr3	10607294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	D11
typical_cds_rare	Chr3	10607312	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	A2
typical_cds_rare	Chr3	10607332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	B16,B74,B89,C79
lof_cds	Chr3	10607374	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	19	A13,B10,B105,B106,B29,B30,B31,B61,B72,B8,B86,B97,B98,C11,C33,C36,C45,C51,C69
lof_cds	Chr3	10607398	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	B129
typical_cds_rare	Chr3	10607398	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	1	B129
typical_cds_rare	Chr3	10607403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B42,B59,C37
lof_cds	Chr3	10607434	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	19	A13,B10,B105,B106,B29,B30,B31,B61,B72,B8,B86,B97,B98,C11,C33,C36,C45,C51,C69
typical_cds_rare	Chr3	10607460	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	B16,B74,B89,C79
lof_cds	Chr3	10607481	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	10	A15,B108,B109,B110,B56,B80,B96,C36,C62,C81
typical_cds_rare	Chr3	10607629	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	4	B16,B74,B89,C79
lof_cds	Chr3	10607708	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	35	A18,A2,A9,B101,B104,B125,B127,B140,B17,B26,B34,B35,B45,B5,B52,B55,B57,B59,B6,B66,B69,B77,B86,B90,B92,B93,C10,C2,C21,C25,C29,C46,C48,C6,C8
lof_cds	Chr3	10607709	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B140,B69,C48
typical_cds_rare	Chr3	10607709	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018304	SmilChr03G000926	131018304	rna-XM_057947029.1	3	B140,B69,C48