source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	10768752	A	ATG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	46	A16,A20,A23,A24,A7,B101,B102,B103,B107,B113,B114,B115,B124,B125,B132,B23,B25,B54,B57,B60,B63,B66,B70,B71,B72,B77,B79,B81,B82,B83,B90,B92,B97,C18,C2,C25,C3,C31,C40,C55,C68,C69,C9,D1,D3,D8
typical_cds_rare	Chr3	10768900	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	3	B67,C11,C2
lof_cds	Chr3	10768911	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	B135,B140,C48,D11
typical_cds_rare	Chr3	10768911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	B135,B140,C48,D11
typical_cds_rare	Chr3	10768926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	3	B131,B39,C17
lof_cds	Chr3	10768955	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	3	A1,C17,C21
typical_cds_rare	Chr3	10768955	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	3	A1,C17,C21
lof_cds	Chr3	10768967	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	A21,B108,C23,C65
typical_cds_rare	Chr3	10768967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	A21,B108,C23,C65
lof_cds	Chr3	10768968	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	A21,B108,C23,C65
typical_cds_rare	Chr3	10768968	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	A21,B108,C23,C65
lof_cds	Chr3	10769001	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	26	A8,B102,B123,B125,B129,B133,B137,B27,B3,B47,B48,B56,B57,B66,B84,B92,B94,B96,C16,C2,C21,C22,C3,C34,C84,D4
lof_cds	Chr3	10769022	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	78	A13,A19,A2,A20,A23,A3,A5,A9,B10,B101,B102,B103,B105,B107,B11,B113,B114,B117,B118,B12,B122,B123,B125,B131,B19,B21,B24,B25,B30,B34,B37,B4,B42,B48,B49,B5,B52,B54,B55,B57,B63,B65,B66,B7,B70,B72,B78,B79,B8,B82,B83,B85,B86,B89,B9,B90,B92,B97,B98,C2,C24,C25,C3,C32,C33,C39,C40,C45,C49,C57,C58,C60,C68,C69,C83,D1,D11,D8
typical_cds_rare	Chr3	10773628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1	4	B37,C54,C59,D10
typical_cds_rare	Chr3	10773640	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	A1,B18,B2,B85,C37
lof_cds	Chr3	10773678	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	4	B129,B27,C82,D9
typical_cds_rare	Chr3	10773678	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	4	B129,B27,C82,D9
lof_cds	Chr3	10773687	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	11	A14,B127,B139,B24,B36,B37,C39,C54,C59,C9,D10
lof_cds	Chr3	10773689	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	15	A22,B100,B112,B125,B49,B67,B82,B93,B94,C38,C59,C6,C64,C8,D6
lof_cds	Chr3	10773698	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	40	A11,A19,A8,B10,B100,B103,B108,B12,B122,B127,B19,B25,B26,B32,B44,B48,B55,B63,B65,B81,B85,C1,C18,C19,C20,C24,C25,C40,C46,C49,C52,C53,C59,C71,C78,C80,D4,D6,D7,D8
typical_cds_rare	Chr3	10773756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	3	A22,B82,C8
typical_cds_rare	Chr3	10773790	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	3	B57,B7,C34
typical_cds_rare	Chr3	10773818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	3	B42,B87,B97
lof_cds	Chr3	10773858	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	11	B125,B17,B26,B57,B59,B66,B7,B90,B92,C34,C6
typical_cds_rare	Chr3	10773859	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B100,B63,B81,C46,C52
lof_cds	Chr3	10773860	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B100,B63,B81,C46,C52
typical_cds_rare	Chr3	10773860	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B100,B63,B81,C46,C52
lof_cds	Chr3	10773864	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B100,B63,B81,C46,C52
typical_cds_rare	Chr3	10773864	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B100,B63,B81,C46,C52
lof_cds	Chr3	10773869	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B40,C60
typical_cds_rare	Chr3	10773869	C	CTA	INDEL	2bp_insertion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B40,C60
lof_cds	Chr3	10773876	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B81,C52
typical_cds_rare	Chr3	10773876	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B81,C52
lof_cds	Chr3	10773880	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B81,C52
typical_cds_rare	Chr3	10773880	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B81,C52
typical_cds_rare	Chr3	10773938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	C58
typical_cds_rare	Chr3	10773945	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	C13
typical_cds_rare	Chr3	10773964	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	B35
typical_cds_rare	Chr3	10773978	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	B49
typical_cds_rare	Chr3	10774130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	3	A6,B3,C31
typical_cds_rare	Chr3	10774146	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	A6,B3,B47,C31,C47
lof_cds	Chr3	10774154	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	A16,B24
typical_cds_rare	Chr3	10774154	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	A16,B24
lof_cds	Chr3	10774281	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	63	A10,A11,A23,A24,A4,A8,A9,B100,B113,B119,B127,B129,B132,B136,B15,B2,B20,B28,B29,B30,B32,B38,B39,B46,B58,B61,B64,B66,B73,B76,B84,B9,B91,B93,C1,C12,C14,C15,C16,C18,C24,C25,C26,C27,C28,C35,C4,C43,C46,C48,C51,C52,C53,C54,C59,C64,C66,C8,C85,C86,D10,D5,D7
lof_cds	Chr3	10774285	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	61	A10,A11,A24,A4,A8,A9,B100,B113,B119,B127,B129,B132,B136,B15,B2,B20,B28,B29,B30,B32,B38,B39,B46,B58,B61,B64,B66,B73,B76,B84,B9,B91,B93,C1,C12,C15,C16,C18,C24,C25,C26,C27,C28,C35,C4,C43,C46,C48,C51,C52,C53,C54,C59,C64,C66,C8,C85,C86,D10,D5,D7
typical_cds_rare	Chr3	10774311	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	4	B57,B7,B88,C34
typical_cds_rare	Chr3	10774343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	D4
typical_cds_rare	Chr3	10774391	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	4	A14,B108,B125,B15
typical_cds_rare	Chr3	10774575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B110,B57,B7,B88,C34
lof_cds	Chr3	10774590	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	6	B101,B119,B124,B2,B32,B49
lof_cds	Chr3	10774593	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	7	B101,B119,B124,B2,B32,B45,B49
lof_cds	Chr3	10774634	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	12	B103,B128,B13,B139,B2,B23,B36,B66,B67,B87,C53,C55
lof_cds	Chr3	10774639	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	13	B103,B128,B13,B139,B2,B23,B36,B5,B66,B67,B87,C53,C55
typical_cds_rare	Chr3	10774644	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	B78
typical_cds_rare	Chr3	10774688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	2	B3,D4
typical_cds_rare	Chr3	10774693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	3	B57,B7,C34
typical_cds_rare	Chr3	10774756	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	B22,B23,C10,C39,C74
typical_cds_rare	Chr3	10774785	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	5	A10,A5,B119,B93,C42
typical_cds_rare	Chr3	10774808	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	B82
typical_cds_rare	Chr3	10774817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	C11
typical_cds_rare	Chr3	10774825	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	3	B63,B95,C59
typical_cds_rare	Chr3	10774911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	4	A22,B70,B71,C27
lof_cds	Chr3	10774977	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	D11
typical_cds_rare	Chr3	10774977	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	D11
lof_cds	Chr3	10775020	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	C45
typical_cds_rare	Chr3	10775020	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131017546	SmilChr03G000951	131017546	rna-XM_057946338.1,rna-XM_057946339.1,rna-XM_057946340.1,rna-XM_057946341.1	1	C45