source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	11054142	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	33	A14,A18,A19,B112,B128,B139,B16,B18,B19,B30,B36,B42,B43,B52,B63,B74,B83,B88,B89,B93,B95,C13,C20,C39,C4,C50,C54,C59,C65,C70,C73,C74,C82
lof_cds	Chr3	11054145	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	33	A14,A18,A19,B112,B128,B139,B16,B18,B19,B30,B36,B42,B43,B52,B63,B74,B83,B88,B89,B93,B95,C13,C20,C39,C4,C50,C54,C59,C65,C70,C73,C74,C82
typical_cds_rare	Chr3	11054287	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	A21
typical_cds_rare	Chr3	11054334	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B110,B125,B45,C40
typical_cds_rare	Chr3	11054421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D10
lof_cds	Chr3	11054431	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B37,C77,C9
typical_cds_rare	Chr3	11054431	C	CAG	INDEL	2bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B37,C77,C9
typical_cds_rare	Chr3	11054443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D10
lof_cds	Chr3	11054475	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	C64,C66
typical_cds_rare	Chr3	11054475	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	C64,C66
typical_cds_rare	Chr3	11054515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B19,B67
lof_cds	Chr3	11054537	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D10
typical_cds_rare	Chr3	11054537	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D10
typical_cds_rare	Chr3	11054594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	C64,C66
typical_cds_rare	Chr3	11054637	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D10
typical_cds_rare	Chr3	11054650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B22,B23,C39
lof_cds	Chr3	11054673	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C66
typical_cds_rare	Chr3	11054673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C66
lof_cds	Chr3	11054725	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	A21
typical_cds_rare	Chr3	11054725	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	A21
lof_cds	Chr3	11054728	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	48	A10,A15,A16,A20,A22,A9,B1,B102,B107,B108,B110,B125,B128,B13,B131,B138,B19,B24,B26,B35,B4,B40,B45,B46,B65,B67,B71,B77,B82,B99,C10,C20,C21,C23,C27,C32,C38,C40,C6,C60,C68,C70,C73,C76,C8,D1,D3,D7
typical_cds_rare	Chr3	11054790	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	C16,C80
typical_cds_rare	Chr3	11054793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B121,C16,C80,D10,D4
typical_cds_rare	Chr3	11054816	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1	1	C80
typical_cds_rare	Chr3	11054818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1	1	C80
typical_cds_rare	Chr3	11054823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1	1	D10
typical_cds_rare	Chr3	11054850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1	1	D10
typical_cds_rare	Chr3	11055114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B4
typical_cds_rare	Chr3	11055136	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C80
typical_cds_rare	Chr3	11055147	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B120,B53
typical_cds_rare	Chr3	11055149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B120,B53
typical_cds_rare	Chr3	11055152	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B115,B29,C53
typical_cds_rare	Chr3	11055165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B65,C64,C80
typical_cds_rare	Chr3	11055172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	A25,B114,B43,B87,D1
typical_cds_rare	Chr3	11055177	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B24,B69,C47
typical_cds_rare	Chr3	11055255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B5,B69,B85,C47
lof_cds	Chr3	11055269	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	31	A16,B1,B102,B125,B129,B13,B131,B19,B22,B23,B24,B35,B37,B40,B45,B46,B65,B67,B82,C10,C21,C23,C27,C32,C39,C6,C60,C77,C8,C9,D7
typical_cds_rare	Chr3	11055270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B123,B69,C47
lof_cds	Chr3	11055273	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	30	A16,B1,B102,B125,B129,B131,B19,B22,B23,B24,B35,B37,B40,B45,B46,B65,B67,B82,C10,C21,C23,C27,C32,C39,C6,C60,C77,C8,C9,D7
typical_cds_rare	Chr3	11055417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B22,B23,C39
lof_cds	Chr3	11055433	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B129
typical_cds_rare	Chr3	11055433	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B129
typical_cds_rare	Chr3	11055493	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	A8,B140,B49,C20
typical_cds_rare	Chr3	11055533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B71
lof_cds	Chr3	11055577	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	11	B13,B17,B32,B49,B78,B81,B90,C25,C49,D1,D8
typical_cds_rare	Chr3	11055609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D2
typical_cds_rare	Chr3	11055634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B42,B86,C11,C58
typical_cds_rare	Chr3	11055699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B86
typical_cds_rare	Chr3	11055715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C55
typical_cds_rare	Chr3	11055726	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B86,C55
typical_cds_rare	Chr3	11055760	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B117,C32,C60,C68
typical_cds_rare	Chr3	11055843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B125,B14,B58,C49,C76
typical_cds_rare	Chr3	11055852	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B58,C76
typical_cds_rare	Chr3	11055895	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C44
lof_cds	Chr3	11055899	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B14
typical_cds_rare	Chr3	11055899	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B14
lof_cds	Chr3	11055901	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B14
typical_cds_rare	Chr3	11055901	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B14
typical_cds_rare	Chr3	11055937	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B24
typical_cds_rare	Chr3	11055946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B125,B90,B92
lof_cds	Chr3	11056006	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	11	A21,B102,B11,B25,B40,B59,B72,B98,C25,C40,D8
lof_cds	Chr3	11056055	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	29	A2,A5,B105,B118,B123,B130,B31,B5,B53,B63,B65,B66,B70,B75,B86,B98,B99,C11,C2,C22,C32,C36,C51,C55,C60,C68,C69,C71,D8
lof_cds	Chr3	11056056	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	29	A2,A5,B105,B118,B123,B130,B31,B5,B53,B63,B65,B66,B70,B75,B86,B98,B99,C11,C2,C22,C32,C36,C51,C55,C60,C68,C69,C71,D8
lof_cds	Chr3	11056058	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	29	A2,A5,B105,B118,B123,B130,B31,B5,B53,B63,B65,B66,B70,B75,B86,B98,B99,C11,C2,C22,C32,C36,C51,C55,C60,C68,C69,C71,D8
typical_cds_rare	Chr3	11056065	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B69
lof_cds	Chr3	11056120	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C55
typical_cds_rare	Chr3	11056120	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C55
typical_cds_rare	Chr3	11056121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B101,B127,B13,C18,C72
lof_cds	Chr3	11056123	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C55
typical_cds_rare	Chr3	11056123	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C55
typical_cds_rare	Chr3	11056174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B127,B13,C18
typical_cds_rare	Chr3	11056185	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	C44
typical_cds_rare	Chr3	11056222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	A18,B3,B47,C53
typical_cds_rare	Chr3	11056239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B133,C2,C38,D5
typical_cds_rare	Chr3	11056243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B109,B138,B61,B80
typical_cds_rare	Chr3	11056262	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B138
lof_cds	Chr3	11056275	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	36	A1,A14,A9,B106,B107,B110,B119,B123,B131,B19,B27,B29,B31,B34,B45,B51,B65,B72,B8,B82,B89,B97,C11,C17,C29,C33,C51,C55,C59,C65,C68,C69,C76,C77,C80,D8
lof_cds	Chr3	11056280	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	39	A1,A14,A9,B106,B107,B109,B110,B119,B123,B131,B19,B27,B29,B31,B34,B45,B51,B65,B66,B72,B8,B82,B89,B97,C11,C17,C29,C33,C36,C51,C55,C59,C65,C68,C69,C76,C77,C80,D8
typical_cds_rare	Chr3	11056302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	A6,B104,C87
typical_cds_rare	Chr3	11056308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B134,B39,B62,B79,C79
typical_cds_rare	Chr3	11056315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B140,B30,B64,C66
typical_cds_rare	Chr3	11056330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B45,C2,D5
lof_cds	Chr3	11056342	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B124,B140
typical_cds_rare	Chr3	11056342	CCT	C	INDEL	2bp_deletion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B124,B140
typical_cds_rare	Chr3	11056390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B30
typical_cds_rare	Chr3	11056392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	A13,B9,C15
typical_cds_rare	Chr3	11056399	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B120
typical_cds_rare	Chr3	11056400	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B31,B5,B50,C28
lof_cds	Chr3	11056408	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	87	A1,A13,A14,A21,A4,A5,B10,B100,B107,B108,B109,B112,B113,B114,B118,B12,B127,B128,B13,B131,B136,B138,B17,B18,B19,B2,B27,B29,B32,B36,B37,B38,B39,B4,B43,B48,B52,B55,B57,B59,B63,B64,B73,B74,B76,B81,B82,B85,B87,B95,B98,C1,C12,C14,C15,C19,C23,C27,C3,C37,C39,C4,C40,C41,C46,C49,C5,C54,C57,C59,C6,C60,C62,C71,C72,C73,C8,C81,C83,C84,C86,C9,D10,D11,D4,D6,D8
lof_cds	Chr3	11056410	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	9	A5,B64,B76,B91,B93,C17,C18,C2,C5
lof_cds	Chr3	11056411	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	9	B100,B11,B25,B96,C15,C2,C54,D5,D7
lof_cds	Chr3	11056416	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B136,B15,B32,B64,B9
typical_cds_rare	Chr3	11056416	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B136,B15,B32,B64,B9
lof_cds	Chr3	11056423	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B76,B91,C5,C81
typical_cds_rare	Chr3	11056423	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	4	B76,B91,C5,C81
lof_cds	Chr3	11056424	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	49	A13,A21,A8,B10,B101,B102,B112,B123,B125,B133,B137,B14,B27,B28,B3,B31,B47,B48,B56,B57,B66,B7,B77,B78,B84,B87,B89,B9,B90,B92,B94,B95,B96,C12,C16,C2,C21,C22,C26,C28,C3,C34,C56,C80,C84,C85,D11,D4,D5
typical_cds_rare	Chr3	11056432	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	5	B72,B97,C29,C51,C76
typical_cds_rare	Chr3	11056452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B49,C8
lof_cds	Chr3	11056479	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	22	A11,A19,A3,B1,B109,B114,B126,B2,B22,B49,B60,B68,C11,C15,C24,C30,C48,C49,C56,C58,C71,C72
lof_cds	Chr3	11056492	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	12	A1,B102,B113,B26,B43,B44,B53,B89,B93,B95,C47,C53
lof_cds	Chr3	11056495	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	21	A19,A3,B1,B109,B114,B126,B2,B22,B49,B60,B68,C11,C15,C24,C30,C48,C49,C56,C58,C71,C72
typical_cds_rare	Chr3	11056503	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B41
typical_cds_rare	Chr3	11056518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B11,B91,C15
typical_cds_rare	Chr3	11056528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B3,B33,C87
lof_cds	Chr3	11056568	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B3
typical_cds_rare	Chr3	11056568	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B3
typical_cds_rare	Chr3	11056584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	B140,B3
typical_cds_rare	Chr3	11056588	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	2	C48,C69
typical_cds_rare	Chr3	11056603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	3	B25,C25,C87
typical_cds_rare	Chr3	11056628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B3
lof_cds	Chr3	11056641	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D9
typical_cds_rare	Chr3	11056641	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	D9
typical_cds_rare	Chr3	11056647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B3
typical_cds_rare	Chr3	11056661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	A2
lof_cds	Chr3	11056686	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	42	A14,A19,A2,A3,B103,B105,B11,B111,B120,B127,B128,B129,B140,B21,B33,B36,B44,B55,B62,B68,B71,B79,B93,B97,C13,C24,C25,C35,C4,C50,C53,C57,C59,C65,C7,C72,C73,C74,C82,C87,D7,D8
lof_cds	Chr3	11056689	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	41	A14,A19,A2,A3,B103,B105,B11,B111,B120,B127,B128,B129,B21,B33,B36,B44,B55,B62,B68,B71,B79,B93,B97,C13,C24,C25,C35,C4,C50,C53,C57,C59,C65,C7,C72,C73,C74,C82,C87,D7,D8
lof_cds	Chr3	11056721	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B83
typical_cds_rare	Chr3	11056721	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B83
typical_cds_rare	Chr3	11056728	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017515	SmilChr03G000974	131017515	rna-XM_057946270.1,rna-XM_057946272.1	1	B129