source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	11148621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	C24,C30,C63,C73
typical_cds_rare	Chr3	11148626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	A20,B26,B79,C43
lof_cds	Chr3	11148671	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	A16,B73,C30
typical_cds_rare	Chr3	11148671	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	A16,B73,C30
typical_cds_rare	Chr3	11148676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	A25,B58,C30,C52
typical_cds_rare	Chr3	11148680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B35,B64,C24
lof_cds	Chr3	11148686	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	6	B101,B24,B43,B66,B7,D5
lof_cds	Chr3	11148692	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	141	A10,A11,A16,A19,A2,A20,A21,A23,A7,A8,A9,B10,B100,B101,B102,B105,B107,B112,B113,B119,B120,B123,B126,B127,B128,B129,B13,B130,B136,B138,B140,B15,B16,B17,B18,B2,B20,B24,B26,B28,B3,B30,B32,B36,B37,B38,B39,B4,B41,B44,B46,B48,B49,B50,B55,B56,B57,B58,B59,B6,B62,B65,B66,B67,B68,B70,B72,B73,B74,B79,B8,B80,B84,B86,B88,B92,B94,B95,B96,B99,C1,C10,C11,C13,C14,C19,C20,C21,C23,C26,C28,C3,C30,C31,C33,C34,C35,C37,C4,C40,C41,C43,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C60,C62,C63,C64,C66,C67,C69,C7,C71,C72,C73,C74,C77,C78,C79,C8,C80,C81,C82,C83,C86,C87,C9,D2,D3,D5,D6,D8
typical_cds_rare	Chr3	11148695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B101,B24,B85,D5
typical_cds_rare	Chr3	11148713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B104,B108,B119
typical_cds_rare	Chr3	11148723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	A4,B58,C8
lof_cds	Chr3	11148728	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B132,D7
typical_cds_rare	Chr3	11148728	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B132,D7
typical_cds_rare	Chr3	11148735	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B51,B52,C10,C59
typical_cds_rare	Chr3	11148773	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	5	B53,B65,C19,C68,C85
typical_cds_rare	Chr3	11148774	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B19,B26,B27
lof_cds	Chr3	11148782	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	28	A15,A22,A3,B102,B11,B117,B118,B131,B22,B4,B59,B67,B80,B85,B89,B9,B94,B95,B97,B98,C21,C27,C33,C46,C58,C66,C82,C85
typical_cds_rare	Chr3	11148798	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B24
lof_cds	Chr3	11148823	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	14	A2,A21,A25,B2,B40,B41,B64,B74,B96,C18,C60,C71,C72,C8
typical_cds_rare	Chr3	11148848	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B137,C24,C73,C81
typical_cds_rare	Chr3	11148860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B63,C33
typical_cds_rare	Chr3	11148863	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B33,B51
lof_cds	Chr3	11148870	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	35	B103,B106,B110,B117,B118,B119,B121,B133,B17,B21,B27,B38,B39,B6,B62,B69,B82,B90,B92,C13,C14,C19,C27,C29,C30,C38,C42,C45,C48,C53,C65,C7,C76,C83,D8
lof_cds	Chr3	11148872	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	178	A1,A10,A11,A14,A16,A2,A20,A21,A22,A23,A24,A25,A3,A5,A6,A7,A8,B1,B101,B102,B103,B104,B105,B107,B108,B109,B11,B111,B113,B114,B115,B123,B124,B125,B126,B127,B128,B131,B132,B134,B136,B137,B138,B139,B14,B18,B19,B2,B20,B22,B23,B24,B25,B28,B29,B3,B31,B32,B33,B35,B36,B37,B39,B4,B40,B41,B42,B43,B44,B45,B5,B52,B53,B54,B55,B56,B57,B58,B60,B61,B63,B64,B66,B67,B69,B7,B70,B71,B72,B73,B78,B79,B8,B80,B81,B83,B85,B86,B88,B89,B9,B91,B92,B93,B94,B97,B98,B99,C1,C10,C11,C12,C15,C16,C17,C18,C19,C2,C21,C23,C25,C26,C28,C29,C3,C30,C31,C32,C34,C35,C36,C37,C39,C40,C41,C42,C43,C44,C46,C47,C48,C49,C5,C50,C51,C54,C55,C56,C57,C58,C59,C6,C61,C62,C63,C64,C66,C69,C70,C71,C73,C74,C75,C78,C79,C80,C82,C84,C85,C86,C87,D1,D10,D11,D3,D4,D5,D7
lof_cds	Chr3	11148880	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	6	A15,B120,B135,C18,C33,D9
lof_cds	Chr3	11148883	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	5	A2,B28,B7,B80,C62
typical_cds_rare	Chr3	11148883	TCG	T	INDEL	2bp_deletion	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	5	A2,B28,B7,B80,C62
lof_cds	Chr3	11148885	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	184	A1,A11,A14,A16,A20,A22,A23,A24,A25,A3,A5,A6,A7,A8,B1,B101,B102,B104,B105,B106,B107,B108,B109,B11,B110,B111,B113,B114,B117,B118,B119,B121,B123,B125,B126,B127,B128,B129,B131,B132,B133,B134,B136,B138,B139,B14,B17,B18,B19,B2,B20,B21,B22,B23,B24,B27,B29,B3,B31,B32,B33,B35,B36,B37,B38,B39,B4,B41,B42,B43,B45,B5,B52,B53,B55,B56,B57,B58,B60,B61,B62,B63,B66,B67,B69,B70,B71,B72,B73,B78,B79,B8,B81,B82,B85,B87,B89,B9,B90,B91,B92,B93,B94,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C21,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C34,C35,C36,C37,C38,C39,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C53,C54,C55,C56,C57,C58,C59,C6,C61,C62,C63,C64,C65,C66,C69,C7,C70,C71,C74,C75,C76,C78,C80,C82,C83,C84,C85,C86,C87,D10,D11,D3,D4,D5,D7,D8
typical_cds_rare	Chr3	11148891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C33
typical_cds_rare	Chr3	11148897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	A20,B100,C7,D6
typical_cds_rare	Chr3	11148905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	5	A19,B46,B63,C35,C54
typical_cds_rare	Chr3	11148939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B22
lof_cds	Chr3	11148950	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	168	A10,A11,A14,A16,A18,A19,A2,A20,A23,A24,A3,A4,A5,A6,A8,A9,B1,B101,B105,B106,B107,B108,B109,B11,B110,B113,B114,B115,B117,B12,B122,B123,B126,B128,B129,B13,B131,B132,B133,B134,B135,B136,B138,B139,B14,B140,B17,B18,B20,B22,B23,B24,B27,B28,B29,B30,B32,B33,B37,B38,B39,B4,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B53,B55,B56,B57,B59,B62,B63,B64,B66,B68,B69,B7,B71,B72,B73,B74,B78,B79,B8,B80,B81,B82,B84,B85,B89,B9,B90,B91,B92,B98,B99,C11,C15,C16,C18,C19,C2,C21,C26,C27,C29,C3,C30,C34,C35,C36,C37,C38,C40,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C53,C54,C56,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C72,C74,C75,C76,C77,C80,C83,C85,C86,C87,D1,D10,D11,D3,D4,D5,D6,D8
typical_cds_rare	Chr3	11148968	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B11,B114,C60,D1
typical_cds_rare	Chr3	11148984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B85
typical_cds_rare	Chr3	11149008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B85,C33
typical_cds_rare	Chr3	11149009	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B49,C86
lof_cds	Chr3	11149049	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	A20,B26,C5
typical_cds_rare	Chr3	11149049	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	A20,B26,C5
typical_cds_rare	Chr3	11149091	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	C24,C73,C81
lof_cds	Chr3	11149093	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B25
typical_cds_rare	Chr3	11149093	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B25
lof_cds	Chr3	11149094	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	29	A10,A4,B118,B125,B132,B135,B46,B5,B51,B56,B82,B96,C13,C14,C18,C20,C3,C30,C31,C38,C50,C54,C64,C66,C70,C85,D1,D10,D2
typical_cds_rare	Chr3	11149103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B63,B80,B95,C14
typical_cds_rare	Chr3	11149120	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B49
typical_cds_rare	Chr3	11149126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B14,B47,B84,C20
typical_cds_rare	Chr3	11149131	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B121,B97
typical_cds_rare	Chr3	11149148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B63
typical_cds_rare	Chr3	11149187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B37,B63,B73
typical_cds_rare	Chr3	11149196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B104
typical_cds_rare	Chr3	11149203	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B26,C5
typical_cds_rare	Chr3	11149206	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B49
lof_cds	Chr3	11149237	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	167	A1,A13,A14,A16,A2,A20,A22,A24,A4,A5,A8,A9,B1,B101,B102,B103,B105,B106,B107,B108,B110,B112,B114,B117,B119,B12,B120,B121,B122,B123,B124,B127,B129,B131,B133,B134,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B20,B21,B23,B24,B26,B27,B28,B29,B3,B30,B32,B33,B36,B37,B4,B41,B42,B44,B48,B5,B50,B51,B53,B54,B57,B60,B61,B62,B63,B64,B65,B66,B67,B7,B73,B75,B78,B8,B80,B81,B82,B84,B85,B86,B87,B89,B9,B90,B91,B92,B96,B97,B98,C1,C11,C14,C15,C16,C17,C18,C21,C24,C26,C27,C28,C3,C30,C31,C34,C35,C36,C37,C38,C4,C40,C42,C43,C44,C45,C46,C47,C5,C50,C51,C53,C54,C56,C58,C59,C6,C60,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C74,C77,C78,C79,C80,C82,C83,C84,C85,C86,C87,C9,D1,D11,D3,D4,D7,D8
lof_cds	Chr3	11149243	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	59	A1,A5,A6,A7,A8,B101,B102,B103,B104,B106,B112,B119,B126,B128,B130,B134,B137,B15,B18,B20,B21,B26,B29,B41,B42,B54,B55,B59,B61,B67,B75,B8,B81,B9,B96,B97,C12,C15,C17,C18,C21,C27,C33,C35,C46,C49,C50,C51,C53,C58,C60,C63,C64,C66,C71,C75,C82,D1,D11
typical_cds_rare	Chr3	11149251	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B106,C21,D11
typical_cds_rare	Chr3	11149252	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	A7,B130,C17,C63
typical_cds_rare	Chr3	11149266	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B11,B123,C60
typical_cds_rare	Chr3	11149290	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B11,B122,B123,C60
typical_cds_rare	Chr3	11149296	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B123
typical_cds_rare	Chr3	11149328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B128,C87,D6
typical_cds_rare	Chr3	11149339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C18
lof_cds	Chr3	11149342	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B56,C18,C50,D11
typical_cds_rare	Chr3	11149342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B56,C18,C50,D11
typical_cds_rare	Chr3	11149345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	3	B14,C21,C60
typical_cds_rare	Chr3	11149347	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C18
lof_cds	Chr3	11149348	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B16,B3,C63,C7
typical_cds_rare	Chr3	11149348	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B16,B3,C63,C7
typical_cds_rare	Chr3	11149355	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C63
typical_cds_rare	Chr3	11149356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B16,B3,C63,C7
typical_cds_rare	Chr3	11149362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	4	B16,B3,C63,C7
lof_cds	Chr3	11149394	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	C29,C49
typical_cds_rare	Chr3	11149394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	C29,C49
typical_cds_rare	Chr3	11149399	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C57
typical_cds_rare	Chr3	11149400	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	C58,D1
typical_cds_rare	Chr3	11149425	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B79,C18
lof_cds	Chr3	11149427	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C42
typical_cds_rare	Chr3	11149427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C42
typical_cds_rare	Chr3	11149439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C42
typical_cds_rare	Chr3	11149488	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	B140
typical_cds_rare	Chr3	11149514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	C36
typical_cds_rare	Chr3	11149515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	1	D11
typical_cds_rare	Chr3	11149876	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018321	SmilChr03G000984	131018321	rna-XM_057947045.1	2	B10,C82